RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 LCHNA4D1U4 455 aa8.38□□□□□ -1.07
NUP88-205ENST00000572809 WDR64B1ANS9 1081 aa8.38□□□□□ -1.07
NUP88-205ENST00000572809 M0QZ92 97 aa8.38□□□□□ -1.07
NUP88-205ENST00000572809 DLL1O00548 723 aa8.38□□□□□ -1.07
NUP88-205ENST00000572809 GAS7O60861 476 aa8.38□□□□□ -1.07
NUP88-205ENST00000572809 PSMD10O75832 226 aa8.38□□□□□ -1.07
NUP88-205ENST00000572809 ARHGEF15O94989 841 aa8.38□□□□□ -1.07
NUP88-205ENST00000572809 TDP2O95551 362 aa8.38□□□□□ -1.07
NUP88-205ENST00000572809 POU3F3P20264 500 aaPredicted RBP8.38□□□□□ -1.07
NUP88-205ENST00000572809 SFNP31947 248 aa8.38□□□□□ -1.07
NUP88-205ENST00000572809 IRS1P35568 1242 aa8.38□□□□□ -1.07
NUP88-205ENST00000572809 HTRA4P83105 476 aaPredicted RBP8.38□□□□□ -1.07
NUP88-205ENST00000572809 TMEM62Q0P6H9 643 aa8.38□□□□□ -1.07
NUP88-205ENST00000572809 INF2Q27J81 1249 aa8.38□□□□□ -1.07
NUP88-205ENST00000572809 LRCH2Q5VUJ6 765 aa8.38□□□□□ -1.07
NUP88-205ENST00000572809 ZNF385CQ66K41 422 aaPredicted RBP8.38□□□□□ -1.07
NUP88-205ENST00000572809 TSHZ1Q6ZSZ6 1077 aa8.38□□□□□ -1.07
NUP88-205ENST00000572809 KIAA0319LQ8IZA0 1049 aa8.38□□□□□ -1.07
NUP88-205ENST00000572809 GTF3C6Q969F1 213 aa8.38□□□□□ -1.07
NUP88-205ENST00000572809 GJA10Q969M2 543 aa8.38□□□□□ -1.07
NUP88-205ENST00000572809 MBOAT7Q96N66 472 aa8.38□□□□□ -1.07
NUP88-205ENST00000572809 TGS1Q96RS0 853 aaKnown RBP8.38□□□□□ -1.07
NUP88-205ENST00000572809 UNC45AQ9H3U1 944 aa8.38□□□□□ -1.07
NUP88-205ENST00000572809 GJB4Q9NTQ9 266 aa8.38□□□□□ -1.07
NUP88-205ENST00000572809 DDX25Q9UHL0 483 aaKnown RBP8.38□□□□□ -1.07
NUP88-205ENST00000572809 DOLKQ9UPQ8 538 aa8.38□□□□□ -1.07
NUP88-205ENST00000572809 TRPV2Q9Y5S1 764 aa8.38□□□□□ -1.07
NUP88-205ENST00000572809 LINC01553A4QN01 128 aa8.37□□□□□ -1.07
NUP88-205ENST00000572809 CARNS1A5YM72 827 aa8.37□□□□□ -1.07
NUP88-205ENST00000572809 EPOPA6NHQ4 379 aa8.37□□□□□ -1.07
NUP88-205ENST00000572809 ZBTB42B2RXF5 422 aa8.37□□□□□ -1.07
NUP88-205ENST00000572809 MAGEB2O15479 319 aa8.37□□□□□ -1.07
NUP88-205ENST00000572809 CHMP2AO43633 222 aa8.37□□□□□ -1.07
NUP88-205ENST00000572809 LARGE1O95461 756 aa8.37□□□□□ -1.07
NUP88-205ENST00000572809 CD52P31358 61 aa8.37□□□□□ -1.07
NUP88-205ENST00000572809 GRM5P41594 1212 aa8.37□□□□□ -1.07
NUP88-205ENST00000572809 JAK3P52333 1124 aa8.37□□□□□ -1.07
NUP88-205ENST00000572809 ERVK-21P61565 698 aa8.37□□□□□ -1.07
NUP88-205ENST00000572809 USP4Q13107 963 aa8.37□□□□□ -1.07
NUP88-205ENST00000572809 LETM2Q2VYF4 491 aa8.37□□□□□ -1.07
NUP88-205ENST00000572809 PPP4R3AQ6IN85 833 aa8.37□□□□□ -1.07
NUP88-205ENST00000572809 PIK3AP1Q6ZUJ8 805 aa8.37□□□□□ -1.07
NUP88-205ENST00000572809 MIER3Q7Z3K6 550 aa8.37□□□□□ -1.07
NUP88-205ENST00000572809 SPRED2Q7Z698 418 aa8.37□□□□□ -1.07
NUP88-205ENST00000572809 NEK8Q86SG6 692 aa8.37□□□□□ -1.07
NUP88-205ENST00000572809 SVOPQ8N4V2 548 aa8.37□□□□□ -1.07
NUP88-205ENST00000572809 MEIOBQ8N635 442 aa8.37□□□□□ -1.07
NUP88-205ENST00000572809 METTL13Q8N6R0 699 aa8.37□□□□□ -1.07
NUP88-205ENST00000572809 RDM1Q8NG50 284 aa8.37□□□□□ -1.07
NUP88-205ENST00000572809 FAM167AQ96KS9 214 aa8.37□□□□□ -1.07
NUP88-205ENST00000572809 YME1L1Q96TA2 773 aa8.37□□□□□ -1.07
NUP88-205ENST00000572809 FTHL17Q9BXU8 183 aa8.37□□□□□ -1.07
NUP88-205ENST00000572809 AGO3Q9H9G7 860 aaKnown RBP8.37□□□□□ -1.07
NUP88-205ENST00000572809 PADI3Q9ULW8 664 aa8.37□□□□□ -1.07
NUP88-205ENST00000572809 CEP131Q9UPN4 1083 aa8.37□□□□□ -1.07
NUP88-205ENST00000572809 LIMCH1Q9UPQ0 1083 aa8.37□□□□□ -1.07
NUP88-205ENST00000572809 RBM19Q9Y4C8 960 aaKnown RBP8.37□□□□□ -1.07
NUP88-205ENST00000572809 MTCH2Q9Y6C9 303 aa8.37□□□□□ -1.07
NUP88-205ENST00000572809 MYO9BQ13459 2157 aa8.37□□□□□ -1.07
NUP88-205ENST00000572809 IGSF9BQ9UPX0 1349 aa8.36□□□□□ -1.07
NUP88-205ENST00000572809 KDM3AQ9Y4C1 1321 aa8.36□□□□□ -1.07
NUP88-205ENST00000572809 ZNF862O60290 1169 aa8.36□□□□□ -1.07
NUP88-205ENST00000572809 MARCH6O60337 910 aa8.36□□□□□ -1.07
NUP88-205ENST00000572809 CCNT1O60563 726 aaKnown RBP8.36□□□□□ -1.07
NUP88-205ENST00000572809 RPS6KA5O75582 802 aa8.36□□□□□ -1.07
NUP88-205ENST00000572809 C22orf31O95567 290 aa8.36□□□□□ -1.07
NUP88-205ENST00000572809 GCFC2P16383 781 aaKnown RBP8.36□□□□□ -1.07
NUP88-205ENST00000572809 TMOD1P28289 359 aa8.36□□□□□ -1.07
NUP88-205ENST00000572809 KRT2P35908 639 aa8.36□□□□□ -1.07
NUP88-205ENST00000572809 GRB10Q13322 594 aa8.36□□□□□ -1.07
NUP88-205ENST00000572809 C8orf34Q49A92 452 aa8.36□□□□□ -1.07
NUP88-205ENST00000572809 ODR4Q5SWX8 454 aa8.36□□□□□ -1.07
NUP88-205ENST00000572809 TMCO4Q5TGY1 634 aa8.36□□□□□ -1.07
NUP88-205ENST00000572809 EFCAB12Q6NXP0 572 aa8.36□□□□□ -1.07
NUP88-205ENST00000572809 B3GNT9Q6UX72 402 aa8.36□□□□□ -1.07
NUP88-205ENST00000572809 FAM43BQ6ZT52 329 aaPredicted RBP8.36□□□□□ -1.07
NUP88-205ENST00000572809 RTN4RL1Q86UN2 441 aaPredicted RBP8.36□□□□□ -1.07
NUP88-205ENST00000572809 MICALL1Q8N3F8 863 aa8.36□□□□□ -1.07
NUP88-205ENST00000572809 NSUN7Q8NE18 718 aaKnown RBP8.36□□□□□ -1.07
NUP88-205ENST00000572809 ETNPPLQ8TBG4 499 aa8.36□□□□□ -1.07
NUP88-205ENST00000572809 FAM20AQ96MK3 541 aa8.36□□□□□ -1.07
NUP88-205ENST00000572809 NAP1L4Q99733 375 aaKnown RBP8.36□□□□□ -1.07
NUP88-205ENST00000572809 SUGCTQ9HAC7 445 aa8.36□□□□□ -1.07
NUP88-205ENST00000572809 BRMS1Q9HCU9 246 aa8.36□□□□□ -1.07
NUP88-205ENST00000572809 PRDM6Q9NQX0 595 aa8.36□□□□□ -1.07
NUP88-205ENST00000572809 LMCD1Q9NZU5 365 aa8.36□□□□□ -1.07
NUP88-205ENST00000572809 MTUS1Q9ULD2 1270 aa8.36□□□□□ -1.07
NUP88-205ENST00000572809 GINS2Q9Y248 185 aa8.36□□□□□ -1.07
NUP88-205ENST00000572809 DNMT3AQ9Y6K1 912 aaPredicted RBP8.36□□□□□ -1.07
NUP88-205ENST00000572809 PTPRSQ13332 1948 aa8.36□□□□□ -1.07
NUP88-205ENST00000572809 COL6A3P12111 3177 aa8.35□□□□□ -1.07
NUP88-205ENST00000572809 BTBD18B2RXH4 712 aa8.35□□□□□ -1.07
NUP88-205ENST00000572809 TBX3O15119 743 aa8.35□□□□□ -1.07
NUP88-205ENST00000572809 GPR182O15218 404 aa8.35□□□□□ -1.07
NUP88-205ENST00000572809 SLC37A4O43826 429 aa8.35□□□□□ -1.07
NUP88-205ENST00000572809 JAK2O60674 1132 aa8.35□□□□□ -1.07
NUP88-205ENST00000572809 LPXNO60711 386 aa8.35□□□□□ -1.07
NUP88-205ENST00000572809 BAG4O95429 457 aaKnown RBP8.35□□□□□ -1.07
NUP88-205ENST00000572809 MMP1P03956 469 aa8.35□□□□□ -1.07
NUP88-205ENST00000572809 VTNP04004 478 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms