RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 NOC2LQ9Y3T9 749 aaKnown RBP8.66□□□□□ -1.02
SMG6-211ENST00000572369 A0A087WZ62 844 aa8.65□□□□□ -1.02
SMG6-211ENST00000572369 PP2D1A8MPX8 630 aa8.65□□□□□ -1.02
SMG6-211ENST00000572369 ASAP2O43150 1006 aa8.65□□□□□ -1.02
SMG6-211ENST00000572369 GPR32O75388 356 aa8.65□□□□□ -1.02
SMG6-211ENST00000572369 DGAT1O75907 488 aa8.65□□□□□ -1.02
SMG6-211ENST00000572369 CA3P07451 260 aa8.65□□□□□ -1.02
SMG6-211ENST00000572369 STAG3L1P0CL83 205 aa8.65□□□□□ -1.02
SMG6-211ENST00000572369 SRGAP2CP0DJJ0 459 aa8.65□□□□□ -1.02
SMG6-211ENST00000572369 SPATA31C1P0DKV0 1188 aa8.65□□□□□ -1.02
SMG6-211ENST00000572369 XRCC6P12956 609 aaKnown RBP eCLIP8.65□□□□□ -1.02
SMG6-211ENST00000572369 MYOGP15173 224 aa8.65□□□□□ -1.02
SMG6-211ENST00000572369 ZSCAN20P17040 1043 aaPredicted RBP8.65□□□□□ -1.02
SMG6-211ENST00000572369 MUTP22033 750 aa8.65□□□□□ -1.02
SMG6-211ENST00000572369 SFPQP23246 707 aaKnown RBP eCLIP8.65□□□□□ -1.02
SMG6-211ENST00000572369 EIF4BP23588 611 aaKnown RBP8.65□□□□□ -1.02
SMG6-211ENST00000572369 RARRES1P49788 294 aa8.65□□□□□ -1.02
SMG6-211ENST00000572369 RESTQ13127 1097 aa8.65□□□□□ -1.02
SMG6-211ENST00000572369 DRP2Q13474 957 aa8.65□□□□□ -1.02
SMG6-211ENST00000572369 ARL6IP4Q66PJ3 421 aaKnown RBP8.65□□□□□ -1.02
SMG6-211ENST00000572369 PTCRAQ6ISU1 281 aaPredicted RBP8.65□□□□□ -1.02
SMG6-211ENST00000572369 ZNF410Q86VK4 478 aa8.65□□□□□ -1.02
SMG6-211ENST00000572369 IGSF22Q8N9C0 903 aa8.65□□□□□ -1.02
SMG6-211ENST00000572369 PRPF31Q8WWY3 499 aaKnown RBP8.65□□□□□ -1.02
SMG6-211ENST00000572369 ZNF396Q96N95 335 aaPredicted RBP8.65□□□□□ -1.02
SMG6-211ENST00000572369 RAD9AQ99638 391 aa8.65□□□□□ -1.02
SMG6-211ENST00000572369 FDXACB1Q9BRP7 624 aaPredicted RBP8.65□□□□□ -1.02
SMG6-211ENST00000572369 DHX33Q9H6R0 707 aaKnown RBP8.65□□□□□ -1.02
SMG6-211ENST00000572369 RNF216Q9NWF9 866 aaPredicted RBP8.65□□□□□ -1.02
SMG6-211ENST00000572369 ST3GAL5Q9UNP4 418 aa8.65□□□□□ -1.02
SMG6-211ENST00000572369 KIAA1024Q9UPX6 916 aa8.65□□□□□ -1.02
SMG6-211ENST00000572369 MTMR6Q9Y217 621 aa8.65□□□□□ -1.02
SMG6-211ENST00000572369 INSL6Q9Y581 213 aa8.65□□□□□ -1.02
SMG6-211ENST00000572369 COL4A3BPQ9Y5P4 624 aa8.65□□□□□ -1.02
SMG6-211ENST00000572369 BRWD1Q9NSI6 2320 aa8.65□□□□□ -1.03
SMG6-211ENST00000572369 TECTAO75443 2155 aa8.65□□□□□ -1.03
SMG6-211ENST00000572369 IGKV6-21A0A0C4DH24 114 aa8.64□□□□□ -1.03
SMG6-211ENST00000572369 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.64□□□□□ -1.03
SMG6-211ENST00000572369 GRXCR2A6NFK2 248 aa8.64□□□□□ -1.03
SMG6-211ENST00000572369 EPOPA6NHQ4 379 aa8.64□□□□□ -1.03
SMG6-211ENST00000572369 H0Y858 1186 aa8.64□□□□□ -1.03
SMG6-211ENST00000572369 ENPP3O14638 875 aa8.64□□□□□ -1.03
SMG6-211ENST00000572369 CSDE1O75534 798 aaKnown RBP8.64□□□□□ -1.03
SMG6-211ENST00000572369 GJB5O95377 273 aa8.64□□□□□ -1.03
SMG6-211ENST00000572369 SSBP05455 408 aaKnown RBP eCLIP8.64□□□□□ -1.03
SMG6-211ENST00000572369 DARSP14868 501 aaKnown RBP8.64□□□□□ -1.03
SMG6-211ENST00000572369 FGFR4P22455 802 aa8.64□□□□□ -1.03
SMG6-211ENST00000572369 MARCKSP29966 332 aaPredicted RBP8.64□□□□□ -1.03
SMG6-211ENST00000572369 CDC25AP30304 524 aa8.64□□□□□ -1.03
SMG6-211ENST00000572369 UBA7P41226 1012 aa8.64□□□□□ -1.03
SMG6-211ENST00000572369 NBL1P41271 181 aa8.64□□□□□ -1.03
SMG6-211ENST00000572369 ZP2Q05996 745 aa8.64□□□□□ -1.03
SMG6-211ENST00000572369 NCBP1Q09161 790 aaKnown RBP8.64□□□□□ -1.03
SMG6-211ENST00000572369 LAMTOR4Q0VGL1 99 aa8.64□□□□□ -1.03
SMG6-211ENST00000572369 MKRN4PQ13434 485 aaPredicted RBP8.64□□□□□ -1.03
SMG6-211ENST00000572369 TFDP1Q14186 410 aa8.64□□□□□ -1.03
SMG6-211ENST00000572369 MXD4Q14582 209 aaPredicted RBP8.64□□□□□ -1.03
SMG6-211ENST00000572369 PUM1Q14671 1186 aaKnown RBP eCLIP8.64□□□□□ -1.03
SMG6-211ENST00000572369 FOXD4L6Q3SYB3 417 aaPredicted RBP8.64□□□□□ -1.03
SMG6-211ENST00000572369 FAM102BQ5T8I3 360 aa8.64□□□□□ -1.03
SMG6-211ENST00000572369 FAM173BQ6P4H8 233 aa8.64□□□□□ -1.03
SMG6-211ENST00000572369 FOXD4L3Q6VB84 417 aaPredicted RBP8.64□□□□□ -1.03
SMG6-211ENST00000572369 CATSPER4Q7RTX7 472 aa8.64□□□□□ -1.03
SMG6-211ENST00000572369 FAM228AQ86W67 206 aa8.64□□□□□ -1.03
SMG6-211ENST00000572369 KSR1Q8IVT5 923 aa8.64□□□□□ -1.03
SMG6-211ENST00000572369 LINC01465Q8N7H1 131 aa8.64□□□□□ -1.03
SMG6-211ENST00000572369 RNF149Q8NC42 400 aa8.64□□□□□ -1.03
SMG6-211ENST00000572369 TMEM40Q8WWA1 233 aa8.64□□□□□ -1.03
SMG6-211ENST00000572369 CALML4Q96GE6 196 aa8.64□□□□□ -1.03
SMG6-211ENST00000572369 CEP89Q96ST8 783 aa8.64□□□□□ -1.03
SMG6-211ENST00000572369 PLIN2Q99541 437 aa8.64□□□□□ -1.03
SMG6-211ENST00000572369 ADAM2Q99965 735 aa8.64□□□□□ -1.03
SMG6-211ENST00000572369 NT5C3AQ9H0P0 336 aa8.64□□□□□ -1.03
SMG6-211ENST00000572369 BHMT2Q9H2M3 363 aa8.64□□□□□ -1.03
SMG6-211ENST00000572369 ADAMTS10Q9H324 1103 aa8.64□□□□□ -1.03
SMG6-211ENST00000572369 ERVK-5Q9HDB9 667 aa8.64□□□□□ -1.03
SMG6-211ENST00000572369 TLR9Q9NR96 1032 aa8.64□□□□□ -1.03
SMG6-211ENST00000572369 DBR1Q9UK59 544 aaKnown RBP8.64□□□□□ -1.03
SMG6-211ENST00000572369 DNM3Q9UQ16 869 aa8.64□□□□□ -1.03
SMG6-211ENST00000572369 CLIC4Q9Y696 253 aa8.64□□□□□ -1.03
SMG6-211ENST00000572369 ASPMQ8IZT6 3477 aa8.64□□□□□ -1.03
SMG6-211ENST00000572369 NLRC5Q86WI3 1866 aa8.64□□□□□ -1.03
SMG6-211ENST00000572369 MYH11P35749 1972 aa8.63□□□□□ -1.03
SMG6-211ENST00000572369 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.63□□□□□ -1.03
SMG6-211ENST00000572369 TMEM221A6NGB7 291 aa8.63□□□□□ -1.03
SMG6-211ENST00000572369 E9PMD0 336 aa8.63□□□□□ -1.03
SMG6-211ENST00000572369 M0R296 226 aa8.63□□□□□ -1.03
SMG6-211ENST00000572369 ERLIN2O94905 339 aa8.63□□□□□ -1.03
SMG6-211ENST00000572369 ZSCAN22P10073 491 aaPredicted RBP8.63□□□□□ -1.03
SMG6-211ENST00000572369 KCNA5P22460 613 aa8.63□□□□□ -1.03
SMG6-211ENST00000572369 LONP1P36776 959 aaKnown RBP8.63□□□□□ -1.03
SMG6-211ENST00000572369 TXLNAP40222 546 aa8.63□□□□□ -1.03
SMG6-211ENST00000572369 PHKA2P46019 1235 aa8.63□□□□□ -1.03
SMG6-211ENST00000572369 STK38Q15208 465 aa8.63□□□□□ -1.03
SMG6-211ENST00000572369 IL17AQ16552 155 aa8.63□□□□□ -1.03
SMG6-211ENST00000572369 TMEM132AQ24JP5 1023 aa8.63□□□□□ -1.03
SMG6-211ENST00000572369 HERC4Q5GLZ8 1057 aaPredicted RBP8.63□□□□□ -1.03
SMG6-211ENST00000572369 PADI6Q6TGC4 694 aa8.63□□□□□ -1.03
SMG6-211ENST00000572369 FAM43BQ6ZT52 329 aaPredicted RBP8.63□□□□□ -1.03
SMG6-211ENST00000572369 CABP7Q86V35 215 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms