RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 IFNLR1Q8IU57 520 aaPredicted RBP11.37□□□□□ -0.59
GTF3C1-213ENST00000571886 SPRYD3Q8NCJ5 442 aa11.37□□□□□ -0.59
GTF3C1-213ENST00000571886 SAMD11Q96NU1 681 aa11.37□□□□□ -0.59
GTF3C1-213ENST00000571886 INO80BQ9C086 356 aaPredicted RBP11.37□□□□□ -0.59
GTF3C1-213ENST00000571886 ALG13Q9NP73 1137 aaKnown RBP11.37□□□□□ -0.59
GTF3C1-213ENST00000571886 CHST12Q9NRB3 414 aa11.37□□□□□ -0.59
GTF3C1-213ENST00000571886 FAM105AQ9NUU6 356 aa11.37□□□□□ -0.59
GTF3C1-213ENST00000571886 USP20Q9Y2K6 914 aa11.37□□□□□ -0.59
GTF3C1-213ENST00000571886 INO80B-WBP1J3KQ70 363 aa11.36□□□□□ -0.59
GTF3C1-213ENST00000571886 B4GALT5O43286 388 aa11.36□□□□□ -0.59
GTF3C1-213ENST00000571886 TSPAN1O60635 241 aa11.36□□□□□ -0.59
GTF3C1-213ENST00000571886 EYA4O95677 639 aa11.36□□□□□ -0.59
GTF3C1-213ENST00000571886 EDN1P05305 212 aa11.36□□□□□ -0.59
GTF3C1-213ENST00000571886 ITGB1P05556 798 aa11.36□□□□□ -0.59
GTF3C1-213ENST00000571886 RB1P06400 928 aa11.36□□□□□ -0.59
GTF3C1-213ENST00000571886 AFF1P51825 1210 aaKnown RBP11.36□□□□□ -0.59
GTF3C1-213ENST00000571886 MBTD1Q05BQ5 628 aa11.36□□□□□ -0.59
GTF3C1-213ENST00000571886 PTPAQ15257 358 aa11.36□□□□□ -0.59
GTF3C1-213ENST00000571886 ZRSR1Q15695 479 aaKnown RBP11.36□□□□□ -0.59
GTF3C1-213ENST00000571886 KRT79Q5XKE5 535 aa11.36□□□□□ -0.59
GTF3C1-213ENST00000571886 ARL6IP4Q66PJ3 421 aaKnown RBP11.36□□□□□ -0.59
GTF3C1-213ENST00000571886 CDR2LQ86X02 465 aaPredicted RBP11.36□□□□□ -0.59
GTF3C1-213ENST00000571886 KLHL23Q8NBE8 558 aa11.36□□□□□ -0.59
GTF3C1-213ENST00000571886 SPPL3Q8TCT6 385 aa11.36□□□□□ -0.59
GTF3C1-213ENST00000571886 HELQQ8TDG4 1101 aa11.36□□□□□ -0.59
GTF3C1-213ENST00000571886 CCDC43Q96MW1 224 aaKnown RBP11.36□□□□□ -0.59
GTF3C1-213ENST00000571886 RUSC1Q9BVN2 902 aa11.36□□□□□ -0.59
GTF3C1-213ENST00000571886 TRAIPQ9BWF2 469 aa11.36□□□□□ -0.59
GTF3C1-213ENST00000571886 EIF2AQ9BY44 585 aaKnown RBP11.36□□□□□ -0.59
GTF3C1-213ENST00000571886 TMEM117Q9H0C3 514 aa11.36□□□□□ -0.59
GTF3C1-213ENST00000571886 LMCD1Q9NZU5 365 aa11.36□□□□□ -0.59
GTF3C1-213ENST00000571886 PLAGL2Q9UPG8 496 aa11.36□□□□□ -0.59
GTF3C1-213ENST00000571886 A0A0C4DFX4 3053 aa11.36□□□□□ -0.59
GTF3C1-213ENST00000571886 TCF20Q9UGU0 1960 aaKnown RBP11.36□□□□□ -0.59
GTF3C1-213ENST00000571886 LRRIQ4A6NIV6 560 aa11.35□□□□□ -0.59
GTF3C1-213ENST00000571886 STX6O43752 255 aa11.35□□□□□ -0.59
GTF3C1-213ENST00000571886 EOMESO95936 686 aa11.35□□□□□ -0.59
GTF3C1-213ENST00000571886 ARF4P18085 180 aaPredicted RBP11.35□□□□□ -0.59
GTF3C1-213ENST00000571886 PDCP20941 246 aa11.35□□□□□ -0.59
GTF3C1-213ENST00000571886 MARCKSP29966 332 aaPredicted RBP11.35□□□□□ -0.59
GTF3C1-213ENST00000571886 PBX3P40426 434 aa11.35□□□□□ -0.59
GTF3C1-213ENST00000571886 TFF2Q03403 129 aa11.35□□□□□ -0.59
GTF3C1-213ENST00000571886 CEBPZQ03701 1054 aaKnown RBP11.35□□□□□ -0.59
GTF3C1-213ENST00000571886 POU5F1BQ06416 359 aa11.35□□□□□ -0.59
GTF3C1-213ENST00000571886 TFDP1Q14186 410 aa11.35□□□□□ -0.59
GTF3C1-213ENST00000571886 SPECC1Q5M775 1068 aa11.35□□□□□ -0.59
GTF3C1-213ENST00000571886 HYIQ5T013 277 aa11.35□□□□□ -0.59
GTF3C1-213ENST00000571886 SPOUT1Q5T280 376 aaKnown RBP11.35□□□□□ -0.59
GTF3C1-213ENST00000571886 FOXD4L5Q5VV16 416 aaPredicted RBP11.35□□□□□ -0.59
GTF3C1-213ENST00000571886 RINT1Q6NUQ1 792 aa11.35□□□□□ -0.59
GTF3C1-213ENST00000571886 AGMOQ6ZNB7 445 aa11.35□□□□□ -0.59
GTF3C1-213ENST00000571886 USP49Q70CQ1 688 aa11.35□□□□□ -0.59
GTF3C1-213ENST00000571886 HSCBQ8IWL3 235 aa11.35□□□□□ -0.59
GTF3C1-213ENST00000571886 DAW1Q8N136 415 aa11.35□□□□□ -0.59
GTF3C1-213ENST00000571886 COLGALT1Q8NBJ5 622 aa11.35□□□□□ -0.59
GTF3C1-213ENST00000571886 SMG8Q8ND04 991 aaKnown RBP11.35□□□□□ -0.59
GTF3C1-213ENST00000571886 MCPH1Q8NEM0 835 aa11.35□□□□□ -0.59
GTF3C1-213ENST00000571886 FOXD4L4Q8WXT5 416 aaPredicted RBP11.35□□□□□ -0.59
GTF3C1-213ENST00000571886 MRPL38Q96DV4 380 aaKnown RBP11.35□□□□□ -0.59
GTF3C1-213ENST00000571886 USP28Q96RU2 1077 aa11.35□□□□□ -0.59
GTF3C1-213ENST00000571886 KIFC3Q9BVG8 833 aa11.35□□□□□ -0.59
GTF3C1-213ENST00000571886 RAB34Q9BZG1 259 aa11.35□□□□□ -0.59
GTF3C1-213ENST00000571886 RNF39Q9H2S5 420 aa11.35□□□□□ -0.59
GTF3C1-213ENST00000571886 DACT1Q9NYF0 836 aa11.35□□□□□ -0.59
GTF3C1-213ENST00000571886 DNM3Q9UQ16 869 aa11.35□□□□□ -0.59
GTF3C1-213ENST00000571886 PCDHB2Q9Y5E7 798 aa11.35□□□□□ -0.59
GTF3C1-213ENST00000571886 PCDHGC5Q9Y5F6 944 aa11.35□□□□□ -0.59
GTF3C1-213ENST00000571886 MYH15Q9Y2K3 1946 aa11.35□□□□□ -0.59
GTF3C1-213ENST00000571886 MYH11P35749 1972 aa11.34□□□□□ -0.59
GTF3C1-213ENST00000571886 SPTBN5Q9NRC6 3674 aaKnown RBP11.34□□□□□ -0.59
GTF3C1-213ENST00000571886 SFI1A8K8P3 1242 aa11.34□□□□□ -0.59
GTF3C1-213ENST00000571886 B4GALT3O60512 393 aa11.34□□□□□ -0.59
GTF3C1-213ENST00000571886 ZNF623O75123 536 aa11.34□□□□□ -0.59
GTF3C1-213ENST00000571886 OFD1O75665 1012 aa11.34□□□□□ -0.59
GTF3C1-213ENST00000571886 GTF2F1P35269 517 aaKnown RBP eCLIP11.34□□□□□ -0.59
GTF3C1-213ENST00000571886 IRS1P35568 1242 aa11.34□□□□□ -0.59
GTF3C1-213ENST00000571886 MAPK7Q13164 816 aa11.34□□□□□ -0.59
GTF3C1-213ENST00000571886 PKP1Q13835 747 aa11.34□□□□□ -0.59
GTF3C1-213ENST00000571886 SKIV2LQ15477 1246 aaKnown RBP11.34□□□□□ -0.59
GTF3C1-213ENST00000571886 TMEM119Q4V9L6 283 aa11.34□□□□□ -0.59
GTF3C1-213ENST00000571886 TCEAL5Q5H9L2 206 aa11.34□□□□□ -0.59
GTF3C1-213ENST00000571886 CDCA2Q69YH5 1023 aaPredicted RBP11.34□□□□□ -0.59
GTF3C1-213ENST00000571886 C1orf186Q6ZWK4 172 aa11.34□□□□□ -0.59
GTF3C1-213ENST00000571886 MRPL10Q7Z7H8 261 aaKnown RBP11.34□□□□□ -0.59
GTF3C1-213ENST00000571886 CABP7Q86V35 215 aa11.34□□□□□ -0.59
GTF3C1-213ENST00000571886 CLIC6Q96NY7 704 aa11.34□□□□□ -0.59
GTF3C1-213ENST00000571886 PLVAPQ9BX97 442 aa11.34□□□□□ -0.59
GTF3C1-213ENST00000571886 NFKBIZQ9BYH8 718 aa11.34□□□□□ -0.59
GTF3C1-213ENST00000571886 MIOSQ9NXC5 875 aa11.34□□□□□ -0.59
GTF3C1-213ENST00000571886 HES2Q9Y543 173 aa11.34□□□□□ -0.59
GTF3C1-213ENST00000571886 STK24Q9Y6E0 443 aa11.34□□□□□ -0.59
GTF3C1-213ENST00000571886 NPHP3-ACAD11A0A0J9YXS1 232 aa11.33□□□□□ -0.6
GTF3C1-213ENST00000571886 NT5C1B-RDH14C9J2C7 533 aa11.33□□□□□ -0.6
GTF3C1-213ENST00000571886 HIP1RO75146 1068 aa11.33□□□□□ -0.6
GTF3C1-213ENST00000571886 ERLIN2O94905 339 aa11.33□□□□□ -0.6
GTF3C1-213ENST00000571886 SLC12A3P55017 1021 aa11.33□□□□□ -0.6
GTF3C1-213ENST00000571886 KARSQ15046 597 aaKnown RBP11.33□□□□□ -0.6
GTF3C1-213ENST00000571886 ARSHQ5FYA8 562 aa11.33□□□□□ -0.6
GTF3C1-213ENST00000571886 ADGRD2Q7Z7M1 963 aa11.33□□□□□ -0.6
GTF3C1-213ENST00000571886 SYT2Q8N9I0 419 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms