RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, human

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC27-213	ENST00000571643	DAPK3	O43293	454 aa		4.9	□□□□□ -1.63
CDC27-213	ENST00000571643	SDS	P20132	328 aa		4.9	□□□□□ -1.63
CDC27-213	ENST00000571643	POU3F2	P20265	443 aa	Predicted RBP	4.9	□□□□□ -1.63
CDC27-213	ENST00000571643	CD40	P25942	277 aa		4.9	□□□□□ -1.63
CDC27-213	ENST00000571643	HIBADH	P31937	336 aa	Known RBP	4.9	□□□□□ -1.63
CDC27-213	ENST00000571643	PTH1R	Q03431	593 aa		4.9	□□□□□ -1.63
CDC27-213	ENST00000571643	FOXL1	Q12952	345 aa		4.9	□□□□□ -1.63
CDC27-213	ENST00000571643	MAN2A1	Q16706	1144 aa		4.9	□□□□□ -1.63
CDC27-213	ENST00000571643	TAF7L	Q5H9L4	462 aa		4.9	□□□□□ -1.63
CDC27-213	ENST00000571643	EFCAB2	Q5VUJ9	269 aa		4.9	□□□□□ -1.63
CDC27-213	ENST00000571643		Q6ZSN1	163 aa		4.9	□□□□□ -1.63
CDC27-213	ENST00000571643	SGMS1	Q86VZ5	419 aa		4.9	□□□□□ -1.63
CDC27-213	ENST00000571643	GPR135	Q8IZ08	494 aa		4.9	□□□□□ -1.63
CDC27-213	ENST00000571643	THEMIS	Q8N1K5	641 aa	Predicted RBP	4.9	□□□□□ -1.63
CDC27-213	ENST00000571643	EFHB	Q8N7U6	833 aa		4.9	□□□□□ -1.63
CDC27-213	ENST00000571643	NINJ1	Q92982	152 aa		4.9	□□□□□ -1.63
CDC27-213	ENST00000571643	DYDC2	Q96IM9	177 aa		4.9	□□□□□ -1.63
CDC27-213	ENST00000571643	WDR92	Q96MX6	357 aa		4.9	□□□□□ -1.63
CDC27-213	ENST00000571643	SORCS2	Q96PQ0	1159 aa		4.9	□□□□□ -1.63
CDC27-213	ENST00000571643	POLR3GL	Q9BT43	218 aa		4.9	□□□□□ -1.63
CDC27-213	ENST00000571643	KRTAP9-8	Q9BYQ0	159 aa		4.9	□□□□□ -1.63
CDC27-213	ENST00000571643	HAPLN2	Q9GZV7	340 aa		4.9	□□□□□ -1.63
CDC27-213	ENST00000571643	IFT57	Q9NWB7	429 aa		4.9	□□□□□ -1.63
CDC27-213	ENST00000571643	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	4.9	□□□□□ -1.63
CDC27-213	ENST00000571643	PCF11	O94913	1555 aa	Known RBP	4.9	□□□□□ -1.63
CDC27-213	ENST00000571643	VPS8	Q8N3P4	1428 aa		4.89	□□□□□ -1.63
CDC27-213	ENST00000571643	MYO5C	Q9NQX4	1742 aa		4.89	□□□□□ -1.63
CDC27-213	ENST00000571643	SUV39H1	O43463	412 aa		4.89	□□□□□ -1.63
CDC27-213	ENST00000571643	ADCY7	P51828	1080 aa		4.89	□□□□□ -1.63
CDC27-213	ENST00000571643	BPIFB4	P59827	614 aa		4.89	□□□□□ -1.63
CDC27-213	ENST00000571643	ADCY2	Q08462	1091 aa		4.89	□□□□□ -1.63
CDC27-213	ENST00000571643	ABHD18	Q0P651	414 aa		4.89	□□□□□ -1.63
CDC27-213	ENST00000571643	TCIRG1	Q13488	830 aa		4.89	□□□□□ -1.63
CDC27-213	ENST00000571643	KRT40	Q6A162	431 aa		4.89	□□□□□ -1.63
CDC27-213	ENST00000571643	MFSD5	Q6N075	450 aa		4.89	□□□□□ -1.63
CDC27-213	ENST00000571643	KIAA1841	Q6NSI8	718 aa		4.89	□□□□□ -1.63
CDC27-213	ENST00000571643	ZNF662	Q6ZS27	426 aa		4.89	□□□□□ -1.63
CDC27-213	ENST00000571643	C1orf210	Q8IVY1	113 aa		4.89	□□□□□ -1.63
CDC27-213	ENST00000571643	AHI1	Q8N157	1196 aa		4.89	□□□□□ -1.63
CDC27-213	ENST00000571643		Q8N1X5	172 aa		4.89	□□□□□ -1.63
CDC27-213	ENST00000571643	ZNF808	Q8N4W9	903 aa	Predicted RBP	4.89	□□□□□ -1.63
CDC27-213	ENST00000571643	NKD2	Q969F2	451 aa	Predicted RBP	4.89	□□□□□ -1.63
CDC27-213	ENST00000571643	ZNF503	Q96F45	646 aa		4.89	□□□□□ -1.63
CDC27-213	ENST00000571643	HIST1H2AH	Q96KK5	128 aa		4.89	□□□□□ -1.63
CDC27-213	ENST00000571643	HIST1H2AJ	Q99878	128 aa		4.89	□□□□□ -1.63
CDC27-213	ENST00000571643	PITHD1	Q9GZP4	211 aa	Predicted RBP	4.89	□□□□□ -1.63
CDC27-213	ENST00000571643	CSRNP2	Q9H175	543 aa		4.89	□□□□□ -1.63
CDC27-213	ENST00000571643	C14orf93	Q9H972	538 aa	Known RBP	4.89	□□□□□ -1.63
CDC27-213	ENST00000571643	TOMM22	Q9NS69	142 aa		4.89	□□□□□ -1.63
CDC27-213	ENST00000571643	FANCA	O15360	1455 aa		4.88	□□□□□ -1.63
CDC27-213	ENST00000571643	MAGI2	Q86UL8	1455 aa		4.88	□□□□□ -1.63
CDC27-213	ENST00000571643	CDK13	Q14004	1512 aa	Known RBP	4.88	□□□□□ -1.63
CDC27-213	ENST00000571643	ST20-MTHFS	A0A0A6YYL1	179 aa		4.88	□□□□□ -1.63
CDC27-213	ENST00000571643	KRTAP23-1	A1A580	65 aa		4.88	□□□□□ -1.63
CDC27-213	ENST00000571643	GOLGA8B	A8MQT2	603 aa		4.88	□□□□□ -1.63
CDC27-213	ENST00000571643	MTSS1	O43312	755 aa		4.88	□□□□□ -1.63
CDC27-213	ENST00000571643	CDC45	O75419	566 aa		4.88	□□□□□ -1.63
CDC27-213	ENST00000571643	FSBP	O95073	299 aa		4.88	□□□□□ -1.63
CDC27-213	ENST00000571643	F2	P00734	622 aa		4.88	□□□□□ -1.63
CDC27-213	ENST00000571643	JUN	P05412	331 aa	Known RBP	4.88	□□□□□ -1.63
CDC27-213	ENST00000571643	VSIG10L2	P0DP72	767 aa		4.88	□□□□□ -1.63
CDC27-213	ENST00000571643	MCM7	P33993	719 aa		4.88	□□□□□ -1.63
CDC27-213	ENST00000571643	NEK4	P51957	841 aa		4.88	□□□□□ -1.63
CDC27-213	ENST00000571643	HMGA2	P52926	109 aa		4.88	□□□□□ -1.63
CDC27-213	ENST00000571643	CRHR2	Q13324	411 aa		4.88	□□□□□ -1.63
CDC27-213	ENST00000571643	LRRC32	Q14392	662 aa		4.88	□□□□□ -1.63
CDC27-213	ENST00000571643	MYBPC3	Q14896	1274 aa		4.88	□□□□□ -1.63
CDC27-213	ENST00000571643	SART3	Q15020	963 aa	Known RBP	4.88	□□□□□ -1.63
CDC27-213	ENST00000571643	GPR158	Q5T848	1215 aa		4.88	□□□□□ -1.63
CDC27-213	ENST00000571643	CREB3L3	Q68CJ9	461 aa		4.88	□□□□□ -1.63
CDC27-213	ENST00000571643	ESRP1	Q6NXG1	681 aa	Known RBP	4.88	□□□□□ -1.63
CDC27-213	ENST00000571643	KANSL1	Q7Z3B3	1105 aa		4.88	□□□□□ -1.63
CDC27-213	ENST00000571643	PLA2G15	Q8NCC3	412 aa		4.88	□□□□□ -1.63
CDC27-213	ENST00000571643	UBE2Q2	Q8WVN8	375 aa		4.88	□□□□□ -1.63
CDC27-213	ENST00000571643	MIEF2	Q96C03	454 aa		4.88	□□□□□ -1.63
CDC27-213	ENST00000571643	RNPC3	Q96LT9	517 aa	Known RBP	4.88	□□□□□ -1.63
CDC27-213	ENST00000571643	ELF4	Q99607	663 aa	Predicted RBP	4.88	□□□□□ -1.63
CDC27-213	ENST00000571643	FEZ1	Q99689	392 aa		4.88	□□□□□ -1.63
CDC27-213	ENST00000571643	OSBPL6	Q9BZF3	934 aa		4.88	□□□□□ -1.63
CDC27-213	ENST00000571643	ZNF703	Q9H7S9	590 aa	Predicted RBP	4.88	□□□□□ -1.63
CDC27-213	ENST00000571643	PARPBP	Q9NWS1	579 aa		4.88	□□□□□ -1.63
CDC27-213	ENST00000571643	OXSM	Q9NWU1	459 aa		4.88	□□□□□ -1.63
CDC27-213	ENST00000571643	CD2AP	Q9Y5K6	639 aa		4.88	□□□□□ -1.63
CDC27-213	ENST00000571643	RBM8A	Q9Y5S9	174 aa	Known RBP	4.88	□□□□□ -1.63
CDC27-213	ENST00000571643	LRRIQ1	Q96JM4	1722 aa		4.88	□□□□□ -1.63
CDC27-213	ENST00000571643	MTUS2	Q5JR59	1369 aa		4.88	□□□□□ -1.63
CDC27-213	ENST00000571643	AKNA	Q7Z591	1439 aa		4.88	□□□□□ -1.63
CDC27-213	ENST00000571643	DENND4B	O75064	1496 aa	Predicted RBP	4.88	□□□□□ -1.63
CDC27-213	ENST00000571643	PLEKHH2	Q8IVE3	1493 aa		4.88	□□□□□ -1.63
CDC27-213	ENST00000571643		A0A0A6YYJ9	748 aa		4.87	□□□□□ -1.63
CDC27-213	ENST00000571643	NRP1	O14786	923 aa		4.87	□□□□□ -1.63
CDC27-213	ENST00000571643	KPNA6	O60684	536 aa		4.87	□□□□□ -1.63
CDC27-213	ENST00000571643	PRPF6	O94906	941 aa	Known RBP	4.87	□□□□□ -1.63
CDC27-213	ENST00000571643	ZNF202	O95125	648 aa		4.87	□□□□□ -1.63
CDC27-213	ENST00000571643	SLC9A1	P19634	815 aa		4.87	□□□□□ -1.63
CDC27-213	ENST00000571643	PTX3	P26022	381 aa	Predicted RBP	4.87	□□□□□ -1.63
CDC27-213	ENST00000571643	CANX	P27824	592 aa	Known RBP	4.87	□□□□□ -1.63
CDC27-213	ENST00000571643	KPNA1	P52294	538 aa	Predicted RBP	4.87	□□□□□ -1.63
CDC27-213	ENST00000571643	ATP2C1	P98194	919 aa	Predicted RBP	4.87	□□□□□ -1.63
CDC27-213	ENST00000571643	DSG1	Q02413	1049 aa		4.87	□□□□□ -1.63

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