RNA–Protein interactions for RNA: ENST00000571190.1

CIITA-206, Transcript of class II major histocompatibility complex transactivator, humanhuman

Gene CIITA, Length 479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-206ENST00000571190 INO80BQ9C086 356 aaPredicted RBP19.68■□□□□ 0.74
CIITA-206ENST00000571190 DHX33Q9H6R0 707 aaKnown RBP19.68■□□□□ 0.74
CIITA-206ENST00000571190 MINDY3Q9H8M7 445 aa19.68■□□□□ 0.74
CIITA-206ENST00000571190 TPCN1Q9ULQ1 816 aa19.68■□□□□ 0.74
CIITA-206ENST00000571190 TECTAO75443 2155 aa19.67■□□□□ 0.74
CIITA-206ENST00000571190 ZC3H11AO75152 810 aaKnown RBP eCLIP19.67■□□□□ 0.74
CIITA-206ENST00000571190 CTDNEP1O95476 244 aa19.67■□□□□ 0.74
CIITA-206ENST00000571190 P4HBP07237 508 aaKnown RBP19.67■□□□□ 0.74
CIITA-206ENST00000571190 SP100P23497 879 aaPredicted RBP19.67■□□□□ 0.74
CIITA-206ENST00000571190 PTPN21Q16825 1174 aa19.67■□□□□ 0.74
CIITA-206ENST00000571190 NOMO2Q5JPE7 1267 aa19.67■□□□□ 0.74
CIITA-206ENST00000571190 AGMOQ6ZNB7 445 aa19.67■□□□□ 0.74
CIITA-206ENST00000571190 CATSPER4Q7RTX7 472 aa19.67■□□□□ 0.74
CIITA-206ENST00000571190 NEK8Q86SG6 692 aa19.67■□□□□ 0.74
CIITA-206ENST00000571190 FEZF2Q8TBJ5 459 aa19.67■□□□□ 0.74
CIITA-206ENST00000571190 TMEM169Q96HH4 297 aa19.67■□□□□ 0.74
CIITA-206ENST00000571190 IGSF21Q96ID5 467 aa19.67■□□□□ 0.74
CIITA-206ENST00000571190 VN1R3Q9BXE9 311 aa19.67■□□□□ 0.74
CIITA-206ENST00000571190 ADAM7Q9H2U9 754 aa19.67■□□□□ 0.74
CIITA-206ENST00000571190 POMKQ9H5K3 350 aa19.67■□□□□ 0.74
CIITA-206ENST00000571190 DNAJB4Q9UDY4 337 aa19.67■□□□□ 0.74
CIITA-206ENST00000571190 IRAK3Q9Y616 596 aa19.67■□□□□ 0.74
CIITA-206ENST00000571190 CCDC194A0A1B0GVG4 234 aa19.66■□□□□ 0.74
CIITA-206ENST00000571190 ZBTB39O15060 712 aa19.66■□□□□ 0.74
CIITA-206ENST00000571190 HOXA11P31270 313 aaPredicted RBP19.66■□□□□ 0.74
CIITA-206ENST00000571190 AFF1P51825 1210 aaKnown RBP19.66■□□□□ 0.74
CIITA-206ENST00000571190 TPRNQ4KMQ1 711 aa19.66■□□□□ 0.74
CIITA-206ENST00000571190 UBXN11Q5T124 520 aa19.66■□□□□ 0.74
CIITA-206ENST00000571190 KANK3Q6NY19 840 aa19.66■□□□□ 0.74
CIITA-206ENST00000571190 GLB1LQ6UWU2 654 aa19.66■□□□□ 0.74
CIITA-206ENST00000571190 PIK3AP1Q6ZUJ8 805 aa19.66■□□□□ 0.74
CIITA-206ENST00000571190 DDX53Q86TM3 631 aaKnown RBP19.66■□□□□ 0.74
CIITA-206ENST00000571190 ZNF280BQ86YH2 543 aa19.66■□□□□ 0.74
CIITA-206ENST00000571190 FBXL6Q8N531 539 aa19.66■□□□□ 0.74
CIITA-206ENST00000571190 C12orf76Q8N812 135 aaPredicted RBP19.66■□□□□ 0.74
CIITA-206ENST00000571190 PRPF31Q8WWY3 499 aaKnown RBP19.66■□□□□ 0.74
CIITA-206ENST00000571190 RSPH1Q8WYR4 309 aa19.66■□□□□ 0.74
CIITA-206ENST00000571190 TMEM143Q96AN5 459 aa19.66■□□□□ 0.74
CIITA-206ENST00000571190 CEP170P1Q96L14 293 aa19.66■□□□□ 0.74
CIITA-206ENST00000571190 PHOX2BQ99453 314 aa19.66■□□□□ 0.74
CIITA-206ENST00000571190 JPH2Q9BR39 696 aaPredicted RBP19.66■□□□□ 0.74
CIITA-206ENST00000571190 AGPAT5Q9NUQ2 364 aa19.66■□□□□ 0.74
CIITA-206ENST00000571190 RGL1Q9NZL6 768 aa19.66■□□□□ 0.74
CIITA-206ENST00000571190 INPP5FQ9Y2H2 1132 aa19.66■□□□□ 0.74
CIITA-206ENST00000571190 PCDHB2Q9Y5E7 798 aa19.66■□□□□ 0.74
CIITA-206ENST00000571190 COL4A3BPQ9Y5P4 624 aa19.66■□□□□ 0.74
CIITA-206ENST00000571190 EVPLQ92817 2033 aa19.66■□□□□ 0.74
CIITA-206ENST00000571190 FAM205CA6NFA0 338 aa19.65■□□□□ 0.74
CIITA-206ENST00000571190 PFKFB2O60825 505 aa19.65■□□□□ 0.74
CIITA-206ENST00000571190 WEE2P0C1S8 567 aa19.65■□□□□ 0.74
CIITA-206ENST00000571190 CTSAP10619 480 aa19.65■□□□□ 0.74
CIITA-206ENST00000571190 SKIP12755 728 aa19.65■□□□□ 0.74
CIITA-206ENST00000571190 GCFC2P16383 781 aaKnown RBP19.65■□□□□ 0.74
CIITA-206ENST00000571190 SLC11A1P49279 550 aa19.65■□□□□ 0.74
CIITA-206ENST00000571190 RAB27AP51159 221 aa19.65■□□□□ 0.74
CIITA-206ENST00000571190 ITIH3Q06033 890 aa19.65■□□□□ 0.74
CIITA-206ENST00000571190 SPIRE1Q08AE8 756 aa19.65■□□□□ 0.74
CIITA-206ENST00000571190 EPHA7Q15375 998 aa19.65■□□□□ 0.74
CIITA-206ENST00000571190 MRPL10Q7Z7H8 261 aaKnown RBP19.65■□□□□ 0.74
CIITA-206ENST00000571190 C4orf19Q8IY42 314 aa19.65■□□□□ 0.74
CIITA-206ENST00000571190 SLC22A17Q8WUG5 538 aa19.65■□□□□ 0.74
CIITA-206ENST00000571190 STK36Q9NRP7 1315 aa19.65■□□□□ 0.74
CIITA-206ENST00000571190 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.64■□□□□ 0.73
CIITA-206ENST00000571190 C2CD4DB7Z1M9 353 aa19.64■□□□□ 0.73
CIITA-206ENST00000571190 TBX3O15119 743 aa19.64■□□□□ 0.73
CIITA-206ENST00000571190 CCNT1O60563 726 aaKnown RBP19.64■□□□□ 0.73
CIITA-206ENST00000571190 DDHD2O94830 711 aa19.64■□□□□ 0.73
CIITA-206ENST00000571190 EPCAMP16422 314 aa19.64■□□□□ 0.73
CIITA-206ENST00000571190 POLGP54098 1239 aaPredicted RBP19.64■□□□□ 0.73
CIITA-206ENST00000571190 VCPP55072 806 aaKnown RBP19.64■□□□□ 0.73
CIITA-206ENST00000571190 LAMTOR4Q0VGL1 99 aa19.64■□□□□ 0.73
CIITA-206ENST00000571190 POTEDQ86YR6 584 aa19.64■□□□□ 0.73
CIITA-206ENST00000571190 SLC7A3Q8WY07 619 aa19.64■□□□□ 0.73
CIITA-206ENST00000571190 LXNQ9BS40 222 aa19.64■□□□□ 0.73
CIITA-206ENST00000571190 SLKQ9H2G2 1235 aaPredicted RBP19.64■□□□□ 0.73
CIITA-206ENST00000571190 BMP2KQ9NSY1 1161 aaPredicted RBP19.64■□□□□ 0.73
CIITA-206ENST00000571190 DKC1O60832 514 aaKnown RBP eCLIP19.63■□□□□ 0.73
CIITA-206ENST00000571190 CDKL5O76039 1030 aa19.63■□□□□ 0.73
CIITA-206ENST00000571190 SRGAP2CP0DJJ0 459 aa19.63■□□□□ 0.73
CIITA-206ENST00000571190 FDPSP14324 419 aaKnown RBP19.63■□□□□ 0.73
CIITA-206ENST00000571190 YWHABP31946 246 aaKnown RBP19.63■□□□□ 0.73
CIITA-206ENST00000571190 CA8P35219 290 aa19.63■□□□□ 0.73
CIITA-206ENST00000571190 RFC5P40937 340 aa19.63■□□□□ 0.73
CIITA-206ENST00000571190 TCF15Q12870 199 aa19.63■□□□□ 0.73
CIITA-206ENST00000571190 RARS2Q5T160 578 aaKnown RBP19.63■□□□□ 0.73
CIITA-206ENST00000571190 CES5AQ6NT32 575 aa19.63■□□□□ 0.73
CIITA-206ENST00000571190 SRGAP1Q7Z6B7 1085 aa19.63■□□□□ 0.73
CIITA-206ENST00000571190 SUGP1Q8IWZ8 645 aaKnown RBP19.63■□□□□ 0.73
CIITA-206ENST00000571190 PSPC1Q8WXF1 523 aaKnown RBP19.63■□□□□ 0.73
CIITA-206ENST00000571190 TNFRSF25Q93038 417 aa19.63■□□□□ 0.73
CIITA-206ENST00000571190 DYDC2Q96IM9 177 aa19.63■□□□□ 0.73
CIITA-206ENST00000571190 GBP3Q9H0R5 595 aa19.63■□□□□ 0.73
CIITA-206ENST00000571190 TSHZ2Q9NRE2 1034 aa19.63■□□□□ 0.73
CIITA-206ENST00000571190 PPME1Q9Y570 386 aa19.63■□□□□ 0.73
CIITA-206ENST00000571190 PDGFBP01127 241 aaPredicted RBP19.62■□□□□ 0.73
CIITA-206ENST00000571190 RNASELQ05823 741 aaKnown RBP19.62■□□□□ 0.73
CIITA-206ENST00000571190 NR5A1Q13285 461 aa19.62■□□□□ 0.73
CIITA-206ENST00000571190 CTTNQ14247 550 aaKnown RBP19.62■□□□□ 0.73
CIITA-206ENST00000571190 PTPN14Q15678 1187 aa19.62■□□□□ 0.73
CIITA-206ENST00000571190 FERMT3Q86UX7 667 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms