RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 ICAM4Q14773 271 aa5.65□□□□□ -1.5
NUP88-202ENST00000570937 TERF2Q15554 542 aa5.65□□□□□ -1.5
NUP88-202ENST00000570937 TCTN3Q6NUS6 607 aa5.65□□□□□ -1.5
NUP88-202ENST00000570937 AFAP1Q8N556 730 aa5.65□□□□□ -1.5
NUP88-202ENST00000570937 GFM2Q969S9 779 aaKnown RBP5.65□□□□□ -1.5
NUP88-202ENST00000570937 LRRC37BQ96QE4 947 aa5.65□□□□□ -1.5
NUP88-202ENST00000570937 MYL10Q9BUA6 226 aa5.65□□□□□ -1.5
NUP88-202ENST00000570937 KRTAP9-3Q9BYQ3 159 aa5.65□□□□□ -1.5
NUP88-202ENST00000570937 POFUT1Q9H488 388 aa5.65□□□□□ -1.5
NUP88-202ENST00000570937 CAAP1Q9H8G2 361 aa5.65□□□□□ -1.5
NUP88-202ENST00000570937 EMC7Q9NPA0 242 aa5.65□□□□□ -1.5
NUP88-202ENST00000570937 PUF60Q9UHX1 559 aaKnown RBP5.65□□□□□ -1.5
NUP88-202ENST00000570937 DENND2AQ9ULE3 1009 aa5.65□□□□□ -1.5
NUP88-202ENST00000570937 POGZQ7Z3K3 1410 aa5.65□□□□□ -1.51
NUP88-202ENST00000570937 KIAA1107Q9UPP5 1409 aa5.65□□□□□ -1.51
NUP88-202ENST00000570937 GPATCH8Q9UKJ3 1502 aaKnown RBP5.64□□□□□ -1.51
NUP88-202ENST00000570937 ZEB2O60315 1214 aa5.64□□□□□ -1.51
NUP88-202ENST00000570937 H2AFYO75367 372 aaKnown RBP5.64□□□□□ -1.51
NUP88-202ENST00000570937 EGFLAMQ63HQ2 1017 aa5.64□□□□□ -1.51
NUP88-202ENST00000570937 UNQ6494/PRO21346Q6UXR6 183 aa5.64□□□□□ -1.51
NUP88-202ENST00000570937 ESPNLQ6ZVH7 1005 aa5.64□□□□□ -1.51
NUP88-202ENST00000570937 DDX46Q7L014 1031 aaKnown RBP5.64□□□□□ -1.51
NUP88-202ENST00000570937 C11orf74Q86VG3 221 aa5.64□□□□□ -1.51
NUP88-202ENST00000570937 TAX1BP1Q86VP1 789 aa5.64□□□□□ -1.51
NUP88-202ENST00000570937 DYDC2Q96IM9 177 aa5.64□□□□□ -1.51
NUP88-202ENST00000570937 ZNF496Q96IT1 587 aaPredicted RBP5.64□□□□□ -1.51
NUP88-202ENST00000570937 C8orf49Q96NF6 230 aa5.64□□□□□ -1.51
NUP88-202ENST00000570937 GNRHR2Q96P88 292 aa5.64□□□□□ -1.51
NUP88-202ENST00000570937 TMX1Q9H3N1 280 aa5.64□□□□□ -1.51
NUP88-202ENST00000570937 SEMA4AQ9H3S1 761 aa5.64□□□□□ -1.51
NUP88-202ENST00000570937 POLR3BQ9NW08 1133 aaPredicted RBP5.64□□□□□ -1.51
NUP88-202ENST00000570937 LRRIQ1Q96JM4 1722 aa5.64□□□□□ -1.51
NUP88-202ENST00000570937 C1QTNF3-AMACRE9PGA6 284 aa5.63□□□□□ -1.51
NUP88-202ENST00000570937 ELL2O00472 640 aaPredicted RBP5.63□□□□□ -1.51
NUP88-202ENST00000570937 FOXS1O43638 330 aa5.63□□□□□ -1.51
NUP88-202ENST00000570937 OPHN1O60890 802 aa5.63□□□□□ -1.51
NUP88-202ENST00000570937 ZNF623O75123 536 aa5.63□□□□□ -1.51
NUP88-202ENST00000570937 VIL1P09327 827 aaKnown RBP5.63□□□□□ -1.51
NUP88-202ENST00000570937 TSPY4P0CV99 314 aa5.63□□□□□ -1.51
NUP88-202ENST00000570937 TSPY10P0CW01 314 aa5.63□□□□□ -1.51
NUP88-202ENST00000570937 SOX5P35711 763 aa5.63□□□□□ -1.51
NUP88-202ENST00000570937 HNRNPMP52272 730 aaKnown RBP eCLIP5.63□□□□□ -1.51
NUP88-202ENST00000570937 ADAM15Q13444 863 aa5.63□□□□□ -1.51
NUP88-202ENST00000570937 GIMAP8Q8ND71 665 aaPredicted RBP5.63□□□□□ -1.51
NUP88-202ENST00000570937 CHST13Q8NET6 341 aa5.63□□□□□ -1.51
NUP88-202ENST00000570937 Q8TCH9 128 aa5.63□□□□□ -1.51
NUP88-202ENST00000570937 DVL3Q92997 716 aaPredicted RBP5.63□□□□□ -1.51
NUP88-202ENST00000570937 USP7Q93009 1102 aa5.63□□□□□ -1.51
NUP88-202ENST00000570937 SLC7A6OSQ96CW6 309 aaPredicted RBP5.63□□□□□ -1.51
NUP88-202ENST00000570937 WWC2-AS2Q96NR7 200 aa5.63□□□□□ -1.51
NUP88-202ENST00000570937 DPYSL5Q9BPU6 564 aa5.63□□□□□ -1.51
NUP88-202ENST00000570937 NELFAQ9H3P2 528 aa5.63□□□□□ -1.51
NUP88-202ENST00000570937 MTG2Q9H4K7 406 aa5.63□□□□□ -1.51
NUP88-202ENST00000570937 IFT22Q9H7X7 185 aa5.63□□□□□ -1.51
NUP88-202ENST00000570937 ST6GALNAC2Q9UJ37 374 aa5.63□□□□□ -1.51
NUP88-202ENST00000570937 MSRAQ9UJ68 235 aa5.63□□□□□ -1.51
NUP88-202ENST00000570937 ZFR2Q9UPR6 939 aaKnown RBP5.63□□□□□ -1.51
NUP88-202ENST00000570937 JAG2Q9Y219 1238 aa5.63□□□□□ -1.51
NUP88-202ENST00000570937 SLC30A1Q9Y6M5 507 aa5.63□□□□□ -1.51
NUP88-202ENST00000570937 SPAG9O60271 1321 aaKnown RBP5.63□□□□□ -1.51
NUP88-202ENST00000570937 LRRC9Q6ZRR7 1453 aa5.63□□□□□ -1.51
NUP88-202ENST00000570937 TIAM1Q13009 1591 aa5.63□□□□□ -1.51
NUP88-202ENST00000570937 SLC26A4O43511 780 aa5.62□□□□□ -1.51
NUP88-202ENST00000570937 CDC14BO60729 498 aa5.62□□□□□ -1.51
NUP88-202ENST00000570937 RAD17O75943 681 aa5.62□□□□□ -1.51
NUP88-202ENST00000570937 ZNF20P17024 532 aa5.62□□□□□ -1.51
NUP88-202ENST00000570937 RPS19P39019 145 aaKnown RBP5.62□□□□□ -1.51
NUP88-202ENST00000570937 ADCY7P51828 1080 aa5.62□□□□□ -1.51
NUP88-202ENST00000570937 ATP13A4Q4VNC1 1196 aa5.62□□□□□ -1.51
NUP88-202ENST00000570937 BROXQ5VW32 411 aa5.62□□□□□ -1.51
NUP88-202ENST00000570937 FRMD7Q6ZUT3 714 aa5.62□□□□□ -1.51
NUP88-202ENST00000570937 KRT26Q7Z3Y9 468 aa5.62□□□□□ -1.51
NUP88-202ENST00000570937 RASSF3Q86WH2 238 aa5.62□□□□□ -1.51
NUP88-202ENST00000570937 FUKQ8N0W3 1084 aa5.62□□□□□ -1.51
NUP88-202ENST00000570937 OR14K1Q8NGZ2 314 aa5.62□□□□□ -1.51
NUP88-202ENST00000570937 PPP1R14CQ8TAE6 165 aa5.62□□□□□ -1.51
NUP88-202ENST00000570937 CHAC2Q8WUX2 184 aa5.62□□□□□ -1.51
NUP88-202ENST00000570937 RABGGTAQ92696 567 aa5.62□□□□□ -1.51
NUP88-202ENST00000570937 SLC5A5Q92911 643 aa5.62□□□□□ -1.51
NUP88-202ENST00000570937 WDR92Q96MX6 357 aa5.62□□□□□ -1.51
NUP88-202ENST00000570937 TTC1Q99614 292 aa5.62□□□□□ -1.51
NUP88-202ENST00000570937 OSBPL6Q9BZF3 934 aa5.62□□□□□ -1.51
NUP88-202ENST00000570937 SLC6A15Q9H2J7 730 aa5.62□□□□□ -1.51
NUP88-202ENST00000570937 MAGEL2Q9UJ55 1249 aa5.62□□□□□ -1.51
NUP88-202ENST00000570937 FAM184BQ9ULE4 1060 aa5.62□□□□□ -1.51
NUP88-202ENST00000570937 SYNPO2Q9UMS6 1093 aa5.62□□□□□ -1.51
NUP88-202ENST00000570937 PRKAB1Q9Y478 270 aa5.62□□□□□ -1.51
NUP88-202ENST00000570937 MYPNQ86TC9 1320 aa5.62□□□□□ -1.51
NUP88-202ENST00000570937 ATP10AO60312 1499 aa5.62□□□□□ -1.51
NUP88-202ENST00000570937 NCOA2Q15596 1464 aa5.62□□□□□ -1.51
NUP88-202ENST00000570937 ZMYM4Q5VZL5 1548 aa5.62□□□□□ -1.51
NUP88-202ENST00000570937 ZFYVE16Q7Z3T8 1539 aa5.62□□□□□ -1.51
NUP88-202ENST00000570937 PREX2Q70Z35 1606 aa5.62□□□□□ -1.51
NUP88-202ENST00000570937 SUPT6HQ7KZ85 1726 aaKnown RBP5.62□□□□□ -1.51
NUP88-202ENST00000570937 A0A0A6YYK5 440 aaPredicted RBP5.61□□□□□ -1.51
NUP88-202ENST00000570937 C2orf78A6NCI8 922 aa5.61□□□□□ -1.51
NUP88-202ENST00000570937 NEMP1O14524 444 aa5.61□□□□□ -1.51
NUP88-202ENST00000570937 APOL3O95236 402 aa5.61□□□□□ -1.51
NUP88-202ENST00000570937 PFKMP08237 780 aa5.61□□□□□ -1.51
NUP88-202ENST00000570937 DDB1Q16531 1140 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms