RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 RNF168Q8IYW5 571 aaPredicted RBP8.21□□□□□ -1.1
SMG6-205ENST00000570659 CCDC82Q8N4S0 544 aa8.21□□□□□ -1.1
SMG6-205ENST00000570659 GIMAP8Q8ND71 665 aaPredicted RBP8.21□□□□□ -1.1
SMG6-205ENST00000570659 MAP4K1Q92918 833 aa8.21□□□□□ -1.1
SMG6-205ENST00000570659 CHAMP1Q96JM3 812 aa8.21□□□□□ -1.1
SMG6-205ENST00000570659 CEP89Q96ST8 783 aa8.21□□□□□ -1.1
SMG6-205ENST00000570659 KXD1Q9BQD3 176 aa8.21□□□□□ -1.1
SMG6-205ENST00000570659 RTKNQ9BST9 563 aa8.21□□□□□ -1.1
SMG6-205ENST00000570659 TMEM121BQ9BXQ6 578 aaPredicted RBP8.21□□□□□ -1.1
SMG6-205ENST00000570659 LNPKQ9C0E8 428 aa8.21□□□□□ -1.1
SMG6-205ENST00000570659 AZI2Q9H6S1 392 aa8.21□□□□□ -1.1
SMG6-205ENST00000570659 NCANO14594 1321 aa8.21□□□□□ -1.1
SMG6-205ENST00000570659 NFASCO94856 1347 aa8.21□□□□□ -1.1
SMG6-205ENST00000570659 SDK1Q7Z5N4 2213 aa8.21□□□□□ -1.1
SMG6-205ENST00000570659 LAMA1P25391 3075 aa8.2□□□□□ -1.1
SMG6-205ENST00000570659 IGLV3-22A0A075B6J6 115 aa8.2□□□□□ -1.1
SMG6-205ENST00000570659 KANSL1LA0AUZ9 987 aa8.2□□□□□ -1.1
SMG6-205ENST00000570659 FAM170BA6NMN3 283 aa8.2□□□□□ -1.1
SMG6-205ENST00000570659 MEIS1O00470 390 aa8.2□□□□□ -1.1
SMG6-205ENST00000570659 IFIT3O14879 490 aaKnown RBP8.2□□□□□ -1.1
SMG6-205ENST00000570659 TM4SF5O14894 197 aa8.2□□□□□ -1.1
SMG6-205ENST00000570659 ADAM12O43184 909 aa8.2□□□□□ -1.1
SMG6-205ENST00000570659 HBP1O60381 514 aa8.2□□□□□ -1.1
SMG6-205ENST00000570659 STBD1O95210 358 aa8.2□□□□□ -1.1
SMG6-205ENST00000570659 PAPLNO95428 1278 aa8.2□□□□□ -1.1
SMG6-205ENST00000570659 EIF4BP23588 611 aaKnown RBP8.2□□□□□ -1.1
SMG6-205ENST00000570659 ALDH7A1P49419 539 aaKnown RBP8.2□□□□□ -1.1
SMG6-205ENST00000570659 POLGP54098 1239 aaPredicted RBP8.2□□□□□ -1.1
SMG6-205ENST00000570659 MTAPQ13126 283 aa8.2□□□□□ -1.1
SMG6-205ENST00000570659 GAS6Q14393 721 aa8.2□□□□□ -1.1
SMG6-205ENST00000570659 UBXN2BQ14CS0 331 aa8.2□□□□□ -1.1
SMG6-205ENST00000570659 ZNF528Q3MIS6 628 aa8.2□□□□□ -1.1
SMG6-205ENST00000570659 CCDC178Q5BJE1 867 aa8.2□□□□□ -1.1
SMG6-205ENST00000570659 WWC2Q6AWC2 1192 aa8.2□□□□□ -1.1
SMG6-205ENST00000570659 PDXDC2PQ6P474 469 aa8.2□□□□□ -1.1
SMG6-205ENST00000570659 ZC3H14Q6PJT7 736 aaKnown RBP8.2□□□□□ -1.1
SMG6-205ENST00000570659 C15orf39Q6ZRI6 1047 aa8.2□□□□□ -1.1
SMG6-205ENST00000570659 PALB2Q86YC2 1186 aa8.2□□□□□ -1.1
SMG6-205ENST00000570659 PLEKHM2Q8IWE5 1019 aa8.2□□□□□ -1.1
SMG6-205ENST00000570659 MB21D2Q8IYB1 491 aaPredicted RBP8.2□□□□□ -1.1
SMG6-205ENST00000570659 ABI1Q8IZP0 508 aa8.2□□□□□ -1.1
SMG6-205ENST00000570659 CMASQ8NFW8 434 aaPredicted RBP8.2□□□□□ -1.1
SMG6-205ENST00000570659 ITFG1Q8TB96 612 aa8.2□□□□□ -1.1
SMG6-205ENST00000570659 CRYGNQ8WXF5 182 aa8.2□□□□□ -1.1
SMG6-205ENST00000570659 SMG7Q92540 1137 aaKnown RBP8.2□□□□□ -1.1
SMG6-205ENST00000570659 DSCC1Q9BVC3 393 aa8.2□□□□□ -1.1
SMG6-205ENST00000570659 SPZ1Q9BXG8 430 aa8.2□□□□□ -1.1
SMG6-205ENST00000570659 KRT23Q9C075 422 aa8.2□□□□□ -1.1
SMG6-205ENST00000570659 CXCL16Q9H2A7 254 aa8.2□□□□□ -1.1
SMG6-205ENST00000570659 RNF39Q9H2S5 420 aa8.2□□□□□ -1.1
SMG6-205ENST00000570659 PSTPIP2Q9H939 334 aa8.2□□□□□ -1.1
SMG6-205ENST00000570659 LY9Q9HBG7 655 aa8.2□□□□□ -1.1
SMG6-205ENST00000570659 LTB4R2Q9NPC1 389 aa8.2□□□□□ -1.1
SMG6-205ENST00000570659 ZNF302Q9NR11 478 aa8.2□□□□□ -1.1
SMG6-205ENST00000570659 PRMT8Q9NR22 394 aaPredicted RBP8.2□□□□□ -1.1
SMG6-205ENST00000570659 MIOSQ9NXC5 875 aa8.2□□□□□ -1.1
SMG6-205ENST00000570659 LOC400499M0QZD8 3231 aa8.2□□□□□ -1.1
SMG6-205ENST00000570659 GCN1Q92616 2671 aaKnown RBP8.2□□□□□ -1.1
SMG6-205ENST00000570659 COL1A2P08123 1366 aa8.2□□□□□ -1.1
SMG6-205ENST00000570659 ITPR1Q14643 2758 aa8.2□□□□□ -1.1
SMG6-205ENST00000570659 RALGAPA1Q6GYQ0 2036 aa8.19□□□□□ -1.1
SMG6-205ENST00000570659 DSPP15924 2871 aaKnown RBP8.19□□□□□ -1.1
SMG6-205ENST00000570659 NRP1O14786 923 aa8.19□□□□□ -1.1
SMG6-205ENST00000570659 BACH1O14867 736 aa8.19□□□□□ -1.1
SMG6-205ENST00000570659 SPTLC1O15269 473 aa8.19□□□□□ -1.1
SMG6-205ENST00000570659 POMCP01189 267 aa8.19□□□□□ -1.1
SMG6-205ENST00000570659 LMNB2Q03252 620 aa8.19□□□□□ -1.1
SMG6-205ENST00000570659 MLF2Q15773 248 aaPredicted RBP8.19□□□□□ -1.1
SMG6-205ENST00000570659 IMMTQ16891 758 aaKnown RBP8.19□□□□□ -1.1
SMG6-205ENST00000570659 SLC44A4Q53GD3 710 aa8.19□□□□□ -1.1
SMG6-205ENST00000570659 NOMO2Q5JPE7 1267 aa8.19□□□□□ -1.1
SMG6-205ENST00000570659 ZNF484Q5JVG2 852 aa8.19□□□□□ -1.1
SMG6-205ENST00000570659 UBXN11Q5T124 520 aa8.19□□□□□ -1.1
SMG6-205ENST00000570659 EFCAB12Q6NXP0 572 aa8.19□□□□□ -1.1
SMG6-205ENST00000570659 LILRA6Q6PI73 481 aa8.19□□□□□ -1.1
SMG6-205ENST00000570659 ZNF654Q8IZM8 581 aa8.19□□□□□ -1.1
SMG6-205ENST00000570659 NT5C3AQ9H0P0 336 aa8.19□□□□□ -1.1
SMG6-205ENST00000570659 SMOC1Q9H4F8 434 aa8.19□□□□□ -1.1
SMG6-205ENST00000570659 SH2B1Q9NRF2 756 aaPredicted RBP8.19□□□□□ -1.1
SMG6-205ENST00000570659 HCFC1R1Q9NWW0 138 aa8.19□□□□□ -1.1
SMG6-205ENST00000570659 ZSCAN32Q9NX65 697 aa8.19□□□□□ -1.1
SMG6-205ENST00000570659 FBXO4Q9UKT5 387 aa8.19□□□□□ -1.1
SMG6-205ENST00000570659 AKT3Q9Y243 479 aa8.19□□□□□ -1.1
SMG6-205ENST00000570659 PRG3Q9Y2Y8 225 aaPredicted RBP8.19□□□□□ -1.1
SMG6-205ENST00000570659 PCDHGA2Q9Y5H1 932 aa8.19□□□□□ -1.1
SMG6-205ENST00000570659 MAFBQ9Y5Q3 323 aaPredicted RBP8.19□□□□□ -1.1
SMG6-205ENST00000570659 DMXL2Q8TDJ6 3036 aa8.19□□□□□ -1.1
SMG6-205ENST00000570659 E7EWF7 191 aa8.18□□□□□ -1.1
SMG6-205ENST00000570659 GIPC1O14908 333 aa8.18□□□□□ -1.1
SMG6-205ENST00000570659 HOXA2O43364 376 aa8.18□□□□□ -1.1
SMG6-205ENST00000570659 LAMTOR5O43504 91 aa8.18□□□□□ -1.1
SMG6-205ENST00000570659 TGM5O43548 720 aa8.18□□□□□ -1.1
SMG6-205ENST00000570659 HRO43593 1189 aa8.18□□□□□ -1.1
SMG6-205ENST00000570659 RFX1P22670 979 aa8.18□□□□□ -1.1
SMG6-205ENST00000570659 AK2P54819 239 aa8.18□□□□□ -1.1
SMG6-205ENST00000570659 SF3A2Q15428 464 aaKnown RBP8.18□□□□□ -1.1
SMG6-205ENST00000570659 CEP55Q53EZ4 464 aa8.18□□□□□ -1.1
SMG6-205ENST00000570659 PRSS55Q6UWB4 352 aaPredicted RBP8.18□□□□□ -1.1
SMG6-205ENST00000570659 GRASPQ7Z6J2 395 aaPredicted RBP8.18□□□□□ -1.1
SMG6-205ENST00000570659 ING5Q8WYH8 240 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms