RNA–Protein interactions for RNA: ENST00000569702.1

SHCBP1-207, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-207ENST00000569702 LMCD1Q9NZU5 365 aa12.28□□□□□ -0.44
SHCBP1-207ENST00000569702 RWDD3Q9Y3V2 267 aa12.28□□□□□ -0.44
SHCBP1-207ENST00000569702 MRPL42Q9Y6G3 142 aaKnown RBP12.28□□□□□ -0.44
SHCBP1-207ENST00000569702 FNDC1Q4ZHG4 1894 aaPredicted RBP12.27□□□□□ -0.44
SHCBP1-207ENST00000569702 H3BNC9 293 aa12.27□□□□□ -0.45
SHCBP1-207ENST00000569702 INO80B-WBP1J3KQ70 363 aa12.27□□□□□ -0.45
SHCBP1-207ENST00000569702 HOXA2O43364 376 aa12.27□□□□□ -0.45
SHCBP1-207ENST00000569702 TSPAN1O60635 241 aa12.27□□□□□ -0.45
SHCBP1-207ENST00000569702 SKIP12755 728 aa12.27□□□□□ -0.45
SHCBP1-207ENST00000569702 IBSPP21815 317 aaPredicted RBP12.27□□□□□ -0.45
SHCBP1-207ENST00000569702 AXLP30530 894 aa12.27□□□□□ -0.45
SHCBP1-207ENST00000569702 NASPP49321 788 aaPredicted RBP12.27□□□□□ -0.45
SHCBP1-207ENST00000569702 PAN2Q504Q3 1202 aaKnown RBP12.27□□□□□ -0.45
SHCBP1-207ENST00000569702 UBXN11Q5T124 520 aa12.27□□□□□ -0.45
SHCBP1-207ENST00000569702 TWF2Q6IBS0 349 aaKnown RBP12.27□□□□□ -0.45
SHCBP1-207ENST00000569702 RINT1Q6NUQ1 792 aa12.27□□□□□ -0.45
SHCBP1-207ENST00000569702 C1orf186Q6ZWK4 172 aa12.27□□□□□ -0.45
SHCBP1-207ENST00000569702 CABP7Q86V35 215 aa12.27□□□□□ -0.45
SHCBP1-207ENST00000569702 CASD1Q96PB1 797 aa12.27□□□□□ -0.45
SHCBP1-207ENST00000569702 PLVAPQ9BX97 442 aa12.27□□□□□ -0.45
SHCBP1-207ENST00000569702 CCSER1Q9C0I3 900 aa12.27□□□□□ -0.45
SHCBP1-207ENST00000569702 TMEM117Q9H0C3 514 aa12.27□□□□□ -0.45
SHCBP1-207ENST00000569702 FAM105AQ9NUU6 356 aa12.27□□□□□ -0.45
SHCBP1-207ENST00000569702 FBXO2Q9UK22 296 aaPredicted RBP12.27□□□□□ -0.45
SHCBP1-207ENST00000569702 SRPRBQ9Y5M8 271 aaKnown RBP12.27□□□□□ -0.45
SHCBP1-207ENST00000569702 RALGAPA2Q2PPJ7 1873 aa12.27□□□□□ -0.45
SHCBP1-207ENST00000569702 XIRP2A4UGR9 3374 aa12.27□□□□□ -0.45
SHCBP1-207ENST00000569702 NLRC5Q86WI3 1866 aa12.26□□□□□ -0.45
SHCBP1-207ENST00000569702 LRRIQ4A6NIV6 560 aa12.26□□□□□ -0.45
SHCBP1-207ENST00000569702 TBKBP1A7MCY6 615 aa12.26□□□□□ -0.45
SHCBP1-207ENST00000569702 GTPBP6O43824 516 aaPredicted RBP12.26□□□□□ -0.45
SHCBP1-207ENST00000569702 ERLIN2O94905 339 aa12.26□□□□□ -0.45
SHCBP1-207ENST00000569702 ZSCAN22P10073 491 aaPredicted RBP12.26□□□□□ -0.45
SHCBP1-207ENST00000569702 GUCY2CP25092 1073 aa12.26□□□□□ -0.45
SHCBP1-207ENST00000569702 MARCKSP29966 332 aaPredicted RBP12.26□□□□□ -0.45
SHCBP1-207ENST00000569702 CTNNB1P35222 781 aa12.26□□□□□ -0.45
SHCBP1-207ENST00000569702 UBA7P41226 1012 aa12.26□□□□□ -0.45
SHCBP1-207ENST00000569702 NAMPTP43490 491 aa12.26□□□□□ -0.45
SHCBP1-207ENST00000569702 RAB27AP51159 221 aa12.26□□□□□ -0.45
SHCBP1-207ENST00000569702 SLC12A3P55017 1021 aa12.26□□□□□ -0.45
SHCBP1-207ENST00000569702 SLC39A14Q15043 492 aa12.26□□□□□ -0.45
SHCBP1-207ENST00000569702 ZRSR1Q15695 479 aaKnown RBP12.26□□□□□ -0.45
SHCBP1-207ENST00000569702 FAM187BQ17R55 369 aa12.26□□□□□ -0.45
SHCBP1-207ENST00000569702 CLLU1OSQ5K130 101 aa12.26□□□□□ -0.45
SHCBP1-207ENST00000569702 MRPL10Q7Z7H8 261 aaKnown RBP12.26□□□□□ -0.45
SHCBP1-207ENST00000569702 DAW1Q8N136 415 aa12.26□□□□□ -0.45
SHCBP1-207ENST00000569702 SYT2Q8N9I0 419 aaPredicted RBP12.26□□□□□ -0.45
SHCBP1-207ENST00000569702 LRRC15Q8TF66 581 aa12.26□□□□□ -0.45
SHCBP1-207ENST00000569702 KIFAP3Q92845 792 aa12.26□□□□□ -0.45
SHCBP1-207ENST00000569702 P2RX5Q93086 422 aa12.26□□□□□ -0.45
SHCBP1-207ENST00000569702 PLIN2Q99541 437 aa12.26□□□□□ -0.45
SHCBP1-207ENST00000569702 RUSC1Q9BVN2 902 aa12.26□□□□□ -0.45
SHCBP1-207ENST00000569702 CSRNP2Q9H175 543 aa12.26□□□□□ -0.45
SHCBP1-207ENST00000569702 FZD8Q9H461 694 aa12.26□□□□□ -0.45
SHCBP1-207ENST00000569702 POLD4Q9HCU8 107 aa12.26□□□□□ -0.45
SHCBP1-207ENST00000569702 COL4A4P53420 1690 aaPredicted RBP12.26□□□□□ -0.45
SHCBP1-207ENST00000569702 A0A1B0GUA9 196 aa12.25□□□□□ -0.45
SHCBP1-207ENST00000569702 PLA2G4BP0C869 781 aa12.25□□□□□ -0.45
SHCBP1-207ENST00000569702 ARF4P18085 180 aaPredicted RBP12.25□□□□□ -0.45
SHCBP1-207ENST00000569702 CEBPZQ03701 1054 aaKnown RBP12.25□□□□□ -0.45
SHCBP1-207ENST00000569702 NCBP1Q09161 790 aaKnown RBP12.25□□□□□ -0.45
SHCBP1-207ENST00000569702 MAPK7Q13164 816 aa12.25□□□□□ -0.45
SHCBP1-207ENST00000569702 GPM6BQ13491 265 aa12.25□□□□□ -0.45
SHCBP1-207ENST00000569702 PKP1Q13835 747 aa12.25□□□□□ -0.45
SHCBP1-207ENST00000569702 PPP2R5AQ15172 486 aa12.25□□□□□ -0.45
SHCBP1-207ENST00000569702 NAALADL2Q58DX5 795 aa12.25□□□□□ -0.45
SHCBP1-207ENST00000569702 NOTUMQ6P988 496 aa12.25□□□□□ -0.45
SHCBP1-207ENST00000569702 PPP4R3CPQ6ZMV5 832 aa12.25□□□□□ -0.45
SHCBP1-207ENST00000569702 LRRC55Q6ZSA7 311 aa12.25□□□□□ -0.45
SHCBP1-207ENST00000569702 USP49Q70CQ1 688 aa12.25□□□□□ -0.45
SHCBP1-207ENST00000569702 ZBTB8OSQ8IWT0 167 aa12.25□□□□□ -0.45
SHCBP1-207ENST00000569702 SPRYD3Q8NCJ5 442 aa12.25□□□□□ -0.45
SHCBP1-207ENST00000569702 LINC00301Q8NCQ3 95 aa12.25□□□□□ -0.45
SHCBP1-207ENST00000569702 RSPH1Q8WYR4 309 aa12.25□□□□□ -0.45
SHCBP1-207ENST00000569702 CCDC51Q96ER9 411 aa12.25□□□□□ -0.45
SHCBP1-207ENST00000569702 CALML4Q96GE6 196 aa12.25□□□□□ -0.45
SHCBP1-207ENST00000569702 CDK5RAP3Q96JB5 506 aa12.25□□□□□ -0.45
SHCBP1-207ENST00000569702 PRIMPOLQ96LW4 560 aa12.25□□□□□ -0.45
SHCBP1-207ENST00000569702 C11orf84Q9BUA3 381 aaPredicted RBP12.25□□□□□ -0.45
SHCBP1-207ENST00000569702 TIPINQ9BVW5 301 aa12.25□□□□□ -0.45
SHCBP1-207ENST00000569702 CCDC113Q9H0I3 377 aa12.25□□□□□ -0.45
SHCBP1-207ENST00000569702 C2orf40Q9H1Z8 148 aa12.25□□□□□ -0.45
SHCBP1-207ENST00000569702 CWH43Q9H720 699 aa12.25□□□□□ -0.45
SHCBP1-207ENST00000569702 BLOC1S4Q9NUP1 217 aa12.25□□□□□ -0.45
SHCBP1-207ENST00000569702 TYW1Q9NV66 732 aaKnown RBP12.25□□□□□ -0.45
SHCBP1-207ENST00000569702 PRMT7Q9NVM4 692 aaPredicted RBP12.25□□□□□ -0.45
SHCBP1-207ENST00000569702 KCND2Q9NZV8 630 aa12.25□□□□□ -0.45
SHCBP1-207ENST00000569702 PCDHB2Q9Y5E7 798 aa12.25□□□□□ -0.45
SHCBP1-207ENST00000569702 MEIS3P2A8K0S8 358 aa12.24□□□□□ -0.45
SHCBP1-207ENST00000569702 B4GALT5O43286 388 aa12.24□□□□□ -0.45
SHCBP1-207ENST00000569702 HIP1RO75146 1068 aa12.24□□□□□ -0.45
SHCBP1-207ENST00000569702 F13A1P00488 732 aa12.24□□□□□ -0.45
SHCBP1-207ENST00000569702 PLCG1P19174 1290 aa12.24□□□□□ -0.45
SHCBP1-207ENST00000569702 KARSQ15046 597 aaKnown RBP12.24□□□□□ -0.45
SHCBP1-207ENST00000569702 CCDC85BQ15834 202 aaPredicted RBP12.24□□□□□ -0.45
SHCBP1-207ENST00000569702 ARSHQ5FYA8 562 aa12.24□□□□□ -0.45
SHCBP1-207ENST00000569702 ABI1Q8IZP0 508 aa12.24□□□□□ -0.45
SHCBP1-207ENST00000569702 RNF169Q8NCN4 708 aa12.24□□□□□ -0.45
SHCBP1-207ENST00000569702 SMG8Q8ND04 991 aaKnown RBP12.24□□□□□ -0.45
SHCBP1-207ENST00000569702 CNNM3Q8NE01 707 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms