RNA–Protein interactions for RNA: ENST00000569001.1

BBS4-215, Transcript of Bardet-Biedl syndrome 4, human

TSL 3

Gene BBS4, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-215	ENST00000569001	MFSD3	Q96ES6	412 aa		4.39	□□□□□ -1.71
BBS4-215	ENST00000569001	FEZ1	Q99689	392 aa		4.39	□□□□□ -1.71
BBS4-215	ENST00000569001	TCF25	Q9BQ70	676 aa		4.39	□□□□□ -1.71
BBS4-215	ENST00000569001	USP35	Q9P2H5	1018 aa		4.39	□□□□□ -1.71
BBS4-215	ENST00000569001	PPP2R3B	Q9Y5P8	575 aa		4.39	□□□□□ -1.71
BBS4-215	ENST00000569001	MYPN	Q86TC9	1320 aa		4.39	□□□□□ -1.71
BBS4-215	ENST00000569001		A0A087X0B3	334 aa		4.38	□□□□□ -1.71
BBS4-215	ENST00000569001	PDE8A	O60658	829 aa		4.38	□□□□□ -1.71
BBS4-215	ENST00000569001	FAM20B	O75063	409 aa		4.38	□□□□□ -1.71
BBS4-215	ENST00000569001	RPS6KA4	O75676	772 aa		4.38	□□□□□ -1.71
BBS4-215	ENST00000569001	FKBP9	O95302	570 aa		4.38	□□□□□ -1.71
BBS4-215	ENST00000569001	KIR2DL3	P43628	341 aa		4.38	□□□□□ -1.71
BBS4-215	ENST00000569001	FHL2	Q14192	279 aa		4.38	□□□□□ -1.71
BBS4-215	ENST00000569001	LRRC32	Q14392	662 aa		4.38	□□□□□ -1.71
BBS4-215	ENST00000569001	SART3	Q15020	963 aa	Known RBP	4.38	□□□□□ -1.71
BBS4-215	ENST00000569001	FKBP15	Q5T1M5	1219 aa		4.38	□□□□□ -1.71
BBS4-215	ENST00000569001	FKBP9P1	Q75LS8	142 aa		4.38	□□□□□ -1.71
BBS4-215	ENST00000569001	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	4.38	□□□□□ -1.71
BBS4-215	ENST00000569001	KIF18B	Q86Y91	864 aa		4.38	□□□□□ -1.71
BBS4-215	ENST00000569001	ZZZ3	Q8IYH5	903 aa		4.38	□□□□□ -1.71
BBS4-215	ENST00000569001	MSL3	Q8N5Y2	521 aa	Known RBP	4.38	□□□□□ -1.71
BBS4-215	ENST00000569001	LPP	Q93052	612 aa		4.38	□□□□□ -1.71
BBS4-215	ENST00000569001	ARL8A	Q96BM9	186 aa		4.38	□□□□□ -1.71
BBS4-215	ENST00000569001	UIMC1	Q96RL1	719 aa		4.38	□□□□□ -1.71
BBS4-215	ENST00000569001	MMRN2	Q9H8L6	949 aa		4.38	□□□□□ -1.71
BBS4-215	ENST00000569001	C14orf93	Q9H972	538 aa	Known RBP	4.38	□□□□□ -1.71
BBS4-215	ENST00000569001	EMC7	Q9NPA0	242 aa		4.38	□□□□□ -1.71
BBS4-215	ENST00000569001	PMS2P1	A4D2B8	440 aa		4.37	□□□□□ -1.71
BBS4-215	ENST00000569001	CYR61	O00622	381 aa		4.37	□□□□□ -1.71
BBS4-215	ENST00000569001	DAPK3	O43293	454 aa		4.37	□□□□□ -1.71
BBS4-215	ENST00000569001	KDM1A	O60341	852 aa		4.37	□□□□□ -1.71
BBS4-215	ENST00000569001	ALDH1A2	O94788	518 aa		4.37	□□□□□ -1.71
BBS4-215	ENST00000569001	LY86	O95711	162 aa		4.37	□□□□□ -1.71
BBS4-215	ENST00000569001	LPL	P06858	475 aa		4.37	□□□□□ -1.71
BBS4-215	ENST00000569001	PFKM	P08237	780 aa		4.37	□□□□□ -1.71
BBS4-215	ENST00000569001	HK1	P19367	917 aa		4.37	□□□□□ -1.71
BBS4-215	ENST00000569001	CASR	P41180	1078 aa		4.37	□□□□□ -1.71
BBS4-215	ENST00000569001	PPARA	Q07869	468 aa		4.37	□□□□□ -1.71
BBS4-215	ENST00000569001	TUBA3C	Q13748	450 aa		4.37	□□□□□ -1.71
BBS4-215	ENST00000569001	TRIM25	Q14258	630 aa	Known RBP	4.37	□□□□□ -1.71
BBS4-215	ENST00000569001	TERF2	Q15554	542 aa		4.37	□□□□□ -1.71
BBS4-215	ENST00000569001	BROX	Q5VW32	411 aa		4.37	□□□□□ -1.71
BBS4-215	ENST00000569001	C1QL3	Q5VWW1	255 aa		4.37	□□□□□ -1.71
BBS4-215	ENST00000569001	CCDC62	Q6P9F0	684 aa		4.37	□□□□□ -1.71
BBS4-215	ENST00000569001	TUBA3E	Q6PEY2	450 aa		4.37	□□□□□ -1.71
BBS4-215	ENST00000569001	ESPNL	Q6ZVH7	1005 aa		4.37	□□□□□ -1.71
BBS4-215	ENST00000569001	CXorf67	Q86X51	503 aa	Predicted RBP	4.37	□□□□□ -1.71
BBS4-215	ENST00000569001	TMPRSS6	Q8IU80	811 aa		4.37	□□□□□ -1.71
BBS4-215	ENST00000569001	PASD1	Q8IV76	773 aa		4.37	□□□□□ -1.71
BBS4-215	ENST00000569001	PPM1K	Q8N3J5	372 aa		4.37	□□□□□ -1.71
BBS4-215	ENST00000569001	OR2W6P	Q8NHA6	318 aa		4.37	□□□□□ -1.71
BBS4-215	ENST00000569001	NEU4	Q8WWR8	484 aa	Predicted RBP	4.37	□□□□□ -1.71
BBS4-215	ENST00000569001	HIST1H2AH	Q96KK5	128 aa		4.37	□□□□□ -1.71
BBS4-215	ENST00000569001	ZNF512	Q96ME7	567 aa	Predicted RBP	4.37	□□□□□ -1.71
BBS4-215	ENST00000569001	HIST1H2AJ	Q99878	128 aa		4.37	□□□□□ -1.71
BBS4-215	ENST00000569001	GPR87	Q9BY21	358 aa		4.37	□□□□□ -1.71
BBS4-215	ENST00000569001	SYNPO2	Q9UMS6	1093 aa		4.37	□□□□□ -1.71
BBS4-215	ENST00000569001	REXO2	Q9Y3B8	237 aa	Known RBP	4.37	□□□□□ -1.71
BBS4-215	ENST00000569001	TBX22	Q9Y458	520 aa		4.37	□□□□□ -1.71
BBS4-215	ENST00000569001	PCDHB6	Q9Y5E3	794 aa		4.37	□□□□□ -1.71
BBS4-215	ENST00000569001	ST20-MTHFS	A0A0A6YYL1	179 aa		4.36	□□□□□ -1.71
BBS4-215	ENST00000569001	KRTAP23-1	A1A580	65 aa		4.36	□□□□□ -1.71
BBS4-215	ENST00000569001	KLRG2	A4D1S0	409 aa	Predicted RBP	4.36	□□□□□ -1.71
BBS4-215	ENST00000569001	JUN	P05412	331 aa	Known RBP	4.36	□□□□□ -1.71
BBS4-215	ENST00000569001	CANX	P27824	592 aa	Known RBP	4.36	□□□□□ -1.71
BBS4-215	ENST00000569001	LSS	P48449	732 aa		4.36	□□□□□ -1.71
BBS4-215	ENST00000569001	RABGGTB	P53611	331 aa		4.36	□□□□□ -1.71
BBS4-215	ENST00000569001	GYS2	P54840	703 aa		4.36	□□□□□ -1.71
BBS4-215	ENST00000569001	NPEPPS	P55786	919 aa		4.36	□□□□□ -1.71
BBS4-215	ENST00000569001	MGAT5	Q09328	741 aa		4.36	□□□□□ -1.71
BBS4-215	ENST00000569001	ABHD18	Q0P651	414 aa		4.36	□□□□□ -1.71
BBS4-215	ENST00000569001	CNGB1	Q14028	1251 aa	Predicted RBP	4.36	□□□□□ -1.71
BBS4-215	ENST00000569001	DDB1	Q16531	1140 aa		4.36	□□□□□ -1.71
BBS4-215	ENST00000569001	GAGE13	Q4V321	117 aa		4.36	□□□□□ -1.71
BBS4-215	ENST00000569001	CT83	Q5H943	113 aa		4.36	□□□□□ -1.71
BBS4-215	ENST00000569001	USP51	Q70EK9	711 aa		4.36	□□□□□ -1.71
BBS4-215	ENST00000569001	STRA8	Q7Z7C7	330 aa		4.36	□□□□□ -1.71
BBS4-215	ENST00000569001	LYSMD2	Q8IV50	215 aa		4.36	□□□□□ -1.71
BBS4-215	ENST00000569001	CMTM4	Q8IZR5	234 aa		4.36	□□□□□ -1.71
BBS4-215	ENST00000569001	THEMIS	Q8N1K5	641 aa	Predicted RBP	4.36	□□□□□ -1.71
BBS4-215	ENST00000569001	CDYL2	Q8N8U2	506 aa		4.36	□□□□□ -1.71
BBS4-215	ENST00000569001	ATXN2L	Q8WWM7	1075 aa	Known RBP	4.36	□□□□□ -1.71
BBS4-215	ENST00000569001	GAB3	Q8WWW8	586 aa		4.36	□□□□□ -1.71
BBS4-215	ENST00000569001	MIEF2	Q96C03	454 aa		4.36	□□□□□ -1.71
BBS4-215	ENST00000569001	MPHOSPH9	Q99550	1183 aa		4.36	□□□□□ -1.71
BBS4-215	ENST00000569001	EVL	Q9UI08	416 aa	Predicted RBP	4.36	□□□□□ -1.71
BBS4-215	ENST00000569001	TMPRSS11E	Q9UL52	423 aa		4.36	□□□□□ -1.71
BBS4-215	ENST00000569001	PLAA	Q9Y263	795 aa		4.36	□□□□□ -1.71
BBS4-215	ENST00000569001	NEMP1	O14524	444 aa		4.35	□□□□□ -1.71
BBS4-215	ENST00000569001	FSBP	O95073	299 aa		4.35	□□□□□ -1.71
BBS4-215	ENST00000569001	LSP1	P33241	339 aa		4.35	□□□□□ -1.71
BBS4-215	ENST00000569001	MAN2A2	P49641	1150 aa		4.35	□□□□□ -1.71
BBS4-215	ENST00000569001	MANF	P55145	182 aa	Known RBP	4.35	□□□□□ -1.71
BBS4-215	ENST00000569001	TOB2	Q14106	344 aa	Predicted RBP	4.35	□□□□□ -1.71
BBS4-215	ENST00000569001	SPIDR	Q14159	915 aa		4.35	□□□□□ -1.71
BBS4-215	ENST00000569001	PDCD1	Q15116	288 aa		4.35	□□□□□ -1.71
BBS4-215	ENST00000569001	ATP13A4	Q4VNC1	1196 aa		4.35	□□□□□ -1.71
BBS4-215	ENST00000569001	GIMAP6	Q6P9H5	292 aa		4.35	□□□□□ -1.71
BBS4-215	ENST00000569001	ZNF627	Q7L945	461 aa		4.35	□□□□□ -1.71
BBS4-215	ENST00000569001	XYLT1	Q86Y38	959 aa		4.35	□□□□□ -1.71

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