RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 INO80BQ9C086 356 aaPredicted RBP5.25□□□□□ -1.57
HERPUD1-213ENST00000568358 SLKQ9H2G2 1235 aaPredicted RBP5.25□□□□□ -1.57
HERPUD1-213ENST00000568358 AGO3Q9H9G7 860 aaKnown RBP5.25□□□□□ -1.57
HERPUD1-213ENST00000568358 ATP6V0A4Q9HBG4 840 aa5.25□□□□□ -1.57
HERPUD1-213ENST00000568358 ALG13Q9NP73 1137 aaKnown RBP5.25□□□□□ -1.57
HERPUD1-213ENST00000568358 DISC1Q9NRI5 854 aa5.25□□□□□ -1.57
HERPUD1-213ENST00000568358 RGS18Q9NS28 235 aa5.25□□□□□ -1.57
HERPUD1-213ENST00000568358 PDRG1Q9NUG6 133 aa5.25□□□□□ -1.57
HERPUD1-213ENST00000568358 VPS54Q9P1Q0 977 aa5.25□□□□□ -1.57
HERPUD1-213ENST00000568358 CHD7Q9P2D1 2997 aa5.25□□□□□ -1.57
HERPUD1-213ENST00000568358 MAGEC2Q9UBF1 373 aaPredicted RBP5.25□□□□□ -1.57
HERPUD1-213ENST00000568358 PRKAG3Q9UGI9 489 aa5.25□□□□□ -1.57
HERPUD1-213ENST00000568358 PCDHA4Q9UN74 947 aa5.25□□□□□ -1.57
HERPUD1-213ENST00000568358 ST3GAL5Q9UNP4 418 aa5.25□□□□□ -1.57
HERPUD1-213ENST00000568358 PLAGL2Q9UPG8 496 aa5.25□□□□□ -1.57
HERPUD1-213ENST00000568358 TTC28Q96AY4 2481 aa5.25□□□□□ -1.57
HERPUD1-213ENST00000568358 VCANP13611 3396 aa5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 IGLV3-22A0A075B6J6 115 aa5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 CCDC194A0A1B0GVG4 234 aa5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 PI4K2BG5E9Z4 385 aa5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 GRM6O15303 877 aa5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 DHX15O43143 795 aaKnown RBP5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 CHMP2AO43633 222 aa5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 DKC1O60832 514 aaKnown RBP eCLIP5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 CSPG5O95196 566 aa5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 BAG4O95429 457 aaKnown RBP5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 MMP1P03956 469 aa5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 VTNP04004 478 aa5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 SKIP12755 728 aa5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 NPR3P17342 541 aa5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 ATP2B1P20020 1258 aa5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 MAPK1P28482 360 aa5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 NDUFV1P49821 464 aa5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 EVCP57679 992 aa5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 NLRP11P59045 1033 aaKnown RBP5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 UBE3AQ05086 875 aa5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 STK3Q13188 491 aa5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 TCEAL1Q15170 157 aa5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 NONOQ15233 471 aaKnown RBP eCLIP5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 ANKRD1Q15327 319 aa5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 KIZQ2M2Z5 673 aa5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 Q4G0T1 1027 aa5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 PDE12Q6L8Q7 609 aaKnown RBP5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 MIER3Q7Z3K6 550 aa5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 RTN4RL1Q86UN2 441 aaPredicted RBP5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 CCDC60Q8IWA6 550 aaPredicted RBP5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 THNSL1Q8IYQ7 743 aa5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 BLIDQ8IZY5 108 aa5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 PHTF2Q8N3S3 785 aa5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 KLHL23Q8NBE8 558 aa5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 RDM1Q8NG50 284 aa5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 NEK9Q8TD19 979 aa5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 TBCKQ8TEA7 893 aa5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 POF1BQ8WVV4 589 aa5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 WASF1Q92558 559 aa5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 FAM122AQ96E09 287 aa5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 PPP1R16BQ96T49 567 aa5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 OSMRQ99650 979 aa5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 NAP1L4Q99733 375 aaKnown RBP5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 JPH2Q9BR39 696 aaPredicted RBP5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 AGXT2Q9BYV1 514 aa5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 GCOM2Q9BZD3 368 aaPredicted RBP5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 TM6SF1Q9BZW5 370 aa5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 EPHX3Q9H6B9 360 aa5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 TMEM134Q9H6X4 195 aa5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 ELAC1Q9H777 363 aaKnown RBP5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 TLE6Q9H808 572 aa5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 NCOA5Q9HCD5 579 aaKnown RBP5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 BRMS1Q9HCU9 246 aa5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 DACT1Q9NYF0 836 aa5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 KLHL42Q9P2K6 505 aa5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 CD207Q9UJ71 328 aa5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 NOC2LQ9Y3T9 749 aaKnown RBP5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 MRPL42Q9Y6G3 142 aaKnown RBP5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 CHD9Q3L8U1 2897 aa5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 MYO10Q9HD67 2058 aa5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 TRANK1O15050 2925 aa5.24□□□□□ -1.57
HERPUD1-213ENST00000568358 KIAA1671Q9BY89 1806 aa5.23□□□□□ -1.57
HERPUD1-213ENST00000568358 DDX11L8A8MPP1 907 aa5.23□□□□□ -1.57
HERPUD1-213ENST00000568358 MSH4O15457 936 aa5.23□□□□□ -1.57
HERPUD1-213ENST00000568358 GPR32O75388 356 aa5.23□□□□□ -1.57
HERPUD1-213ENST00000568358 C22orf31O95567 290 aa5.23□□□□□ -1.57
HERPUD1-213ENST00000568358 EOMESO95936 686 aa5.23□□□□□ -1.57
HERPUD1-213ENST00000568358 ITGB1P05556 798 aa5.23□□□□□ -1.57
HERPUD1-213ENST00000568358 P4HBP07237 508 aaKnown RBP5.23□□□□□ -1.57
HERPUD1-213ENST00000568358 IL9P15248 144 aa5.23□□□□□ -1.57
HERPUD1-213ENST00000568358 LAG3P18627 525 aa5.23□□□□□ -1.57
HERPUD1-213ENST00000568358 ATP4AP20648 1035 aa5.23□□□□□ -1.57
HERPUD1-213ENST00000568358 EIF4BP23588 611 aaKnown RBP5.23□□□□□ -1.57
HERPUD1-213ENST00000568358 HSD3B2P26439 372 aa5.23□□□□□ -1.57
HERPUD1-213ENST00000568358 PPM1AP35813 382 aa5.23□□□□□ -1.57
HERPUD1-213ENST00000568358 GCGRP47871 477 aa5.23□□□□□ -1.57
HERPUD1-213ENST00000568358 ALDH7A1P49419 539 aaKnown RBP5.23□□□□□ -1.57
HERPUD1-213ENST00000568358 CLCN3P51790 818 aa5.23□□□□□ -1.57
HERPUD1-213ENST00000568358 PSMC5P62195 406 aa5.23□□□□□ -1.57
HERPUD1-213ENST00000568358 NCBP1Q09161 790 aaKnown RBP5.23□□□□□ -1.57
HERPUD1-213ENST00000568358 ADAM15Q13444 863 aa5.23□□□□□ -1.57
HERPUD1-213ENST00000568358 CLUL1Q15846 466 aa5.23□□□□□ -1.57
HERPUD1-213ENST00000568358 NTRK3Q16288 839 aa5.23□□□□□ -1.57
HERPUD1-213ENST00000568358 PROX2Q3B8N5 592 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms