RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 ASAP3Q8TDY4 903 aa10.59□□□□□ -0.71
SF3B3-211ENST00000568291 FOXD4L4Q8WXT5 416 aaPredicted RBP10.59□□□□□ -0.71
SF3B3-211ENST00000568291 POP1Q99575 1024 aaKnown RBP10.59□□□□□ -0.71
SF3B3-211ENST00000568291 PLVAPQ9BX97 442 aa10.59□□□□□ -0.71
SF3B3-211ENST00000568291 FTHL17Q9BXU8 183 aa10.59□□□□□ -0.71
SF3B3-211ENST00000568291 GCOM2Q9BZD3 368 aaPredicted RBP10.59□□□□□ -0.71
SF3B3-211ENST00000568291 IGFLR1Q9H665 355 aa10.59□□□□□ -0.71
SF3B3-211ENST00000568291 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.59□□□□□ -0.71
SF3B3-211ENST00000568291 RGS18Q9NS28 235 aa10.59□□□□□ -0.71
SF3B3-211ENST00000568291 LRWD1Q9UFC0 647 aa10.59□□□□□ -0.71
SF3B3-211ENST00000568291 CD207Q9UJ71 328 aa10.59□□□□□ -0.71
SF3B3-211ENST00000568291 LRFN2Q9ULH4 789 aa10.59□□□□□ -0.71
SF3B3-211ENST00000568291 USP20Q9Y2K6 914 aa10.59□□□□□ -0.71
SF3B3-211ENST00000568291 KIF3AQ9Y496 699 aa10.59□□□□□ -0.71
SF3B3-211ENST00000568291 PCDHB7Q9Y5E2 793 aa10.59□□□□□ -0.71
SF3B3-211ENST00000568291 COL4A3BPQ9Y5P4 624 aa10.59□□□□□ -0.71
SF3B3-211ENST00000568291 KMT2EQ8IZD2 1858 aa10.58□□□□□ -0.72
SF3B3-211ENST00000568291 C19orf67A6NJJ6 358 aa10.58□□□□□ -0.72
SF3B3-211ENST00000568291 TBKBP1A7MCY6 615 aa10.58□□□□□ -0.72
SF3B3-211ENST00000568291 MEIS3P2A8K0S8 358 aa10.58□□□□□ -0.72
SF3B3-211ENST00000568291 C9IYK1 514 aa10.58□□□□□ -0.72
SF3B3-211ENST00000568291 LINC01565O15544 149 aa10.58□□□□□ -0.72
SF3B3-211ENST00000568291 MBTPS2O43462 519 aa10.58□□□□□ -0.72
SF3B3-211ENST00000568291 ITGB1P05556 798 aa10.58□□□□□ -0.72
SF3B3-211ENST00000568291 STAG3L1P0CL83 205 aa10.58□□□□□ -0.72
SF3B3-211ENST00000568291 IRS1P35568 1242 aa10.58□□□□□ -0.72
SF3B3-211ENST00000568291 RFC5P40937 340 aa10.58□□□□□ -0.72
SF3B3-211ENST00000568291 TRAPPC10P48553 1259 aa10.58□□□□□ -0.72
SF3B3-211ENST00000568291 SARSP49591 514 aaKnown RBP10.58□□□□□ -0.72
SF3B3-211ENST00000568291 RARRES1P49788 294 aa10.58□□□□□ -0.72
SF3B3-211ENST00000568291 NDUFV1P49821 464 aa10.58□□□□□ -0.72
SF3B3-211ENST00000568291 SMAD2Q15796 467 aaKnown RBP10.58□□□□□ -0.72
SF3B3-211ENST00000568291 SLC24A5Q71RS6 500 aa10.58□□□□□ -0.72
SF3B3-211ENST00000568291 RNF149Q8NC42 400 aa10.58□□□□□ -0.72
SF3B3-211ENST00000568291 LPPQ93052 612 aa10.58□□□□□ -0.72
SF3B3-211ENST00000568291 P2RX5Q93086 422 aa10.58□□□□□ -0.72
SF3B3-211ENST00000568291 PPP2R3CQ969Q6 453 aa10.58□□□□□ -0.72
SF3B3-211ENST00000568291 CCDC43Q96MW1 224 aaKnown RBP10.58□□□□□ -0.72
SF3B3-211ENST00000568291 MTRQ99707 1265 aa10.58□□□□□ -0.72
SF3B3-211ENST00000568291 IFT122Q9HBG6 1241 aa10.58□□□□□ -0.72
SF3B3-211ENST00000568291 ALG13Q9NP73 1137 aaKnown RBP10.58□□□□□ -0.72
SF3B3-211ENST00000568291 PLAGL2Q9UPG8 496 aa10.58□□□□□ -0.72
SF3B3-211ENST00000568291 KIAA1024Q9UPX6 916 aa10.58□□□□□ -0.72
SF3B3-211ENST00000568291 ZDBF2Q9HCK1 2354 aa10.57□□□□□ -0.72
SF3B3-211ENST00000568291 VWA3AA6NCI4 1184 aa10.57□□□□□ -0.72
SF3B3-211ENST00000568291 E9PMD0 336 aa10.57□□□□□ -0.72
SF3B3-211ENST00000568291 K7ELQ4 463 aaPredicted RBP10.57□□□□□ -0.72
SF3B3-211ENST00000568291 LYPLA2O95372 231 aa10.57□□□□□ -0.72
SF3B3-211ENST00000568291 ZSCAN20P17040 1043 aaPredicted RBP10.57□□□□□ -0.72
SF3B3-211ENST00000568291 SYT1P21579 422 aa10.57□□□□□ -0.72
SF3B3-211ENST00000568291 DNAJB1P25685 340 aa10.57□□□□□ -0.72
SF3B3-211ENST00000568291 PBX3P40426 434 aa10.57□□□□□ -0.72
SF3B3-211ENST00000568291 FAM189BP81408 668 aa10.57□□□□□ -0.72
SF3B3-211ENST00000568291 CEBPZQ03701 1054 aaKnown RBP10.57□□□□□ -0.72
SF3B3-211ENST00000568291 GRIN1Q05586 938 aa10.57□□□□□ -0.72
SF3B3-211ENST00000568291 CAMK1Q14012 370 aa10.57□□□□□ -0.72
SF3B3-211ENST00000568291 CATSPER4Q7RTX7 472 aa10.57□□□□□ -0.72
SF3B3-211ENST00000568291 KCNK18Q7Z418 384 aa10.57□□□□□ -0.72
SF3B3-211ENST00000568291 ADGRD2Q7Z7M1 963 aa10.57□□□□□ -0.72
SF3B3-211ENST00000568291 CDR2LQ86X02 465 aaPredicted RBP10.57□□□□□ -0.72
SF3B3-211ENST00000568291 SNX29Q8TEQ0 813 aa10.57□□□□□ -0.72
SF3B3-211ENST00000568291 PSPC1Q8WXF1 523 aaKnown RBP10.57□□□□□ -0.72
SF3B3-211ENST00000568291 POLR3CQ9BUI4 534 aaPredicted RBP10.57□□□□□ -0.72
SF3B3-211ENST00000568291 POLR3FQ9H1D9 316 aaPredicted RBP10.57□□□□□ -0.72
SF3B3-211ENST00000568291 TUFT1Q9NNX1 390 aa10.57□□□□□ -0.72
SF3B3-211ENST00000568291 ANKEF1Q9NU02 776 aa10.57□□□□□ -0.72
SF3B3-211ENST00000568291 DDX19AQ9NUU7 478 aaKnown RBP10.57□□□□□ -0.72
SF3B3-211ENST00000568291 RNF19AQ9NV58 838 aa10.57□□□□□ -0.72
SF3B3-211ENST00000568291 PIN4Q9Y237 131 aaKnown RBP10.57□□□□□ -0.72
SF3B3-211ENST00000568291 CLIC4Q9Y696 253 aa10.57□□□□□ -0.72
SF3B3-211ENST00000568291 B4GALT5O43286 388 aa10.56□□□□□ -0.72
SF3B3-211ENST00000568291 LIG1P18858 919 aa10.56□□□□□ -0.72
SF3B3-211ENST00000568291 GLRA2P23416 452 aa10.56□□□□□ -0.72
SF3B3-211ENST00000568291 RPA1P27694 616 aa10.56□□□□□ -0.72
SF3B3-211ENST00000568291 ARL2P36404 184 aa10.56□□□□□ -0.72
SF3B3-211ENST00000568291 CAPSQ13938 189 aa10.56□□□□□ -0.72
SF3B3-211ENST00000568291 FOXD4L6Q3SYB3 417 aaPredicted RBP10.56□□□□□ -0.72
SF3B3-211ENST00000568291 NAALADL2Q58DX5 795 aa10.56□□□□□ -0.72
SF3B3-211ENST00000568291 RILPL1Q5EBL4 403 aa10.56□□□□□ -0.72
SF3B3-211ENST00000568291 SPECC1Q5M775 1068 aa10.56□□□□□ -0.72
SF3B3-211ENST00000568291 TWF2Q6IBS0 349 aaKnown RBP10.56□□□□□ -0.72
SF3B3-211ENST00000568291 PADI6Q6TGC4 694 aa10.56□□□□□ -0.72
SF3B3-211ENST00000568291 FOXD4L3Q6VB84 417 aaPredicted RBP10.56□□□□□ -0.72
SF3B3-211ENST00000568291 DTHD1Q6ZMT9 781 aa10.56□□□□□ -0.72
SF3B3-211ENST00000568291 LRRC55Q6ZSA7 311 aa10.56□□□□□ -0.72
SF3B3-211ENST00000568291 ECHDC2Q86YB7 292 aa10.56□□□□□ -0.72
SF3B3-211ENST00000568291 IGSF22Q8N9C0 903 aa10.56□□□□□ -0.72
SF3B3-211ENST00000568291 KLHL23Q8NBE8 558 aa10.56□□□□□ -0.72
SF3B3-211ENST00000568291 ERMNQ8TAM6 284 aa10.56□□□□□ -0.72
SF3B3-211ENST00000568291 SPPL3Q8TCT6 385 aa10.56□□□□□ -0.72
SF3B3-211ENST00000568291 HELQQ8TDG4 1101 aa10.56□□□□□ -0.72
SF3B3-211ENST00000568291 POF1BQ8WVV4 589 aa10.56□□□□□ -0.72
SF3B3-211ENST00000568291 BSNDQ8WZ55 320 aa10.56□□□□□ -0.72
SF3B3-211ENST00000568291 CPB2Q96IY4 423 aa10.56□□□□□ -0.72
SF3B3-211ENST00000568291 NACC1Q96RE7 527 aa10.56□□□□□ -0.72
SF3B3-211ENST00000568291 JPH2Q9BR39 696 aaPredicted RBP10.56□□□□□ -0.72
SF3B3-211ENST00000568291 MMTAG2Q9BU76 263 aaKnown RBP10.56□□□□□ -0.72
SF3B3-211ENST00000568291 BHMT2Q9H2M3 363 aa10.56□□□□□ -0.72
SF3B3-211ENST00000568291 ATP6V0A4Q9HBG4 840 aa10.56□□□□□ -0.72
SF3B3-211ENST00000568291 TYW1Q9NV66 732 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms