RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 CITO14578 2027 aa9.1□□□□□ -0.95
HDGFL3-205ENST00000568129 MTCL1Q9Y4B5 1905 aaKnown RBP9.09□□□□□ -0.95
HDGFL3-205ENST00000568129 XIRP2A4UGR9 3374 aa9.09□□□□□ -0.95
HDGFL3-205ENST00000568129 PDCD11Q14690 1871 aaKnown RBP9.09□□□□□ -0.95
HDGFL3-205ENST00000568129 A0A087WWV3 80 aa9.09□□□□□ -0.95
HDGFL3-205ENST00000568129 A0A1B0GUA9 196 aa9.09□□□□□ -0.95
HDGFL3-205ENST00000568129 EYA4O95677 639 aa9.09□□□□□ -0.95
HDGFL3-205ENST00000568129 BMP15O95972 392 aa9.09□□□□□ -0.95
HDGFL3-205ENST00000568129 ITGB1P05556 798 aa9.09□□□□□ -0.95
HDGFL3-205ENST00000568129 SRGAP2CP0DJJ0 459 aa9.09□□□□□ -0.95
HDGFL3-205ENST00000568129 CCT6AP40227 531 aaKnown RBP9.09□□□□□ -0.95
HDGFL3-205ENST00000568129 GATMP50440 423 aa9.09□□□□□ -0.95
HDGFL3-205ENST00000568129 RAB27AP51159 221 aa9.09□□□□□ -0.95
HDGFL3-205ENST00000568129 PLCB3Q01970 1234 aa9.09□□□□□ -0.95
HDGFL3-205ENST00000568129 UBE3AQ05086 875 aa9.09□□□□□ -0.95
HDGFL3-205ENST00000568129 MBTD1Q05BQ5 628 aa9.09□□□□□ -0.95
HDGFL3-205ENST00000568129 CAPSQ13938 189 aa9.09□□□□□ -0.95
HDGFL3-205ENST00000568129 TFDP1Q14186 410 aa9.09□□□□□ -0.95
HDGFL3-205ENST00000568129 PTPAQ15257 358 aa9.09□□□□□ -0.95
HDGFL3-205ENST00000568129 PTPROQ16827 1216 aa9.09□□□□□ -0.95
HDGFL3-205ENST00000568129 CSPP1Q1MSJ5 1256 aa9.09□□□□□ -0.95
HDGFL3-205ENST00000568129 PADI6Q6TGC4 694 aa9.09□□□□□ -0.95
HDGFL3-205ENST00000568129 C1orf186Q6ZWK4 172 aa9.09□□□□□ -0.95
HDGFL3-205ENST00000568129 CCDC51Q96ER9 411 aa9.09□□□□□ -0.95
HDGFL3-205ENST00000568129 NLRP4Q96MN2 994 aa9.09□□□□□ -0.95
HDGFL3-205ENST00000568129 PNMA5Q96PV4 448 aa9.09□□□□□ -0.95
HDGFL3-205ENST00000568129 NTPCRQ9BSD7 190 aaKnown RBP9.09□□□□□ -0.95
HDGFL3-205ENST00000568129 FAM105AQ9NUU6 356 aa9.09□□□□□ -0.95
HDGFL3-205ENST00000568129 TYW1Q9NV66 732 aaKnown RBP9.09□□□□□ -0.95
HDGFL3-205ENST00000568129 COG5Q9UP83 839 aa9.09□□□□□ -0.95
HDGFL3-205ENST00000568129 KIAA1024Q9UPX6 916 aa9.09□□□□□ -0.95
HDGFL3-205ENST00000568129 MTMR6Q9Y217 621 aa9.09□□□□□ -0.95
HDGFL3-205ENST00000568129 LZTS1Q9Y250 596 aa9.09□□□□□ -0.95
HDGFL3-205ENST00000568129 ZMYM2Q9UBW7 1377 aa9.09□□□□□ -0.95
HDGFL3-205ENST00000568129 CARNS1A5YM72 827 aa9.08□□□□□ -0.96
HDGFL3-205ENST00000568129 TBKBP1A7MCY6 615 aa9.08□□□□□ -0.96
HDGFL3-205ENST00000568129 GRM6O15303 877 aa9.08□□□□□ -0.96
HDGFL3-205ENST00000568129 TSPAN1O60635 241 aa9.08□□□□□ -0.96
HDGFL3-205ENST00000568129 OFD1O75665 1012 aa9.08□□□□□ -0.96
HDGFL3-205ENST00000568129 FGFR1P11362 822 aa9.08□□□□□ -0.96
HDGFL3-205ENST00000568129 NCLP19338 710 aaKnown RBP9.08□□□□□ -0.96
HDGFL3-205ENST00000568129 CTNNB1P35222 781 aa9.08□□□□□ -0.96
HDGFL3-205ENST00000568129 NAMPTP43490 491 aa9.08□□□□□ -0.96
HDGFL3-205ENST00000568129 RESTQ13127 1097 aa9.08□□□□□ -0.96
HDGFL3-205ENST00000568129 CTC1Q2NKJ3 1217 aa9.08□□□□□ -0.96
HDGFL3-205ENST00000568129 TMEM119Q4V9L6 283 aa9.08□□□□□ -0.96
HDGFL3-205ENST00000568129 KRT79Q5XKE5 535 aa9.08□□□□□ -0.96
HDGFL3-205ENST00000568129 CATSPER4Q7RTX7 472 aa9.08□□□□□ -0.96
HDGFL3-205ENST00000568129 DAW1Q8N136 415 aa9.08□□□□□ -0.96
HDGFL3-205ENST00000568129 SYT2Q8N9I0 419 aaPredicted RBP9.08□□□□□ -0.96
HDGFL3-205ENST00000568129 SMG8Q8ND04 991 aaKnown RBP9.08□□□□□ -0.96
HDGFL3-205ENST00000568129 CNNM3Q8NE01 707 aa9.08□□□□□ -0.96
HDGFL3-205ENST00000568129 BSNDQ8WZ55 320 aa9.08□□□□□ -0.96
HDGFL3-205ENST00000568129 PRIMPOLQ96LW4 560 aa9.08□□□□□ -0.96
HDGFL3-205ENST00000568129 SCLT1Q96NL6 688 aa9.08□□□□□ -0.96
HDGFL3-205ENST00000568129 ASB2Q96Q27 587 aa9.08□□□□□ -0.96
HDGFL3-205ENST00000568129 TIPINQ9BVW5 301 aa9.08□□□□□ -0.96
HDGFL3-205ENST00000568129 CCSER1Q9C0I3 900 aa9.08□□□□□ -0.96
HDGFL3-205ENST00000568129 CCDC113Q9H0I3 377 aa9.08□□□□□ -0.96
HDGFL3-205ENST00000568129 POLR3FQ9H1D9 316 aaPredicted RBP9.08□□□□□ -0.96
HDGFL3-205ENST00000568129 ZSCAN16Q9H4T2 348 aaPredicted RBP9.08□□□□□ -0.96
HDGFL3-205ENST00000568129 C17orf75Q9HAS0 396 aa9.08□□□□□ -0.96
HDGFL3-205ENST00000568129 GPRC5CQ9NQ84 441 aa9.08□□□□□ -0.96
HDGFL3-205ENST00000568129 PRDM6Q9NQX0 595 aa9.08□□□□□ -0.96
HDGFL3-205ENST00000568129 DDX19AQ9NUU7 478 aaKnown RBP9.08□□□□□ -0.96
HDGFL3-205ENST00000568129 KCND2Q9NZV8 630 aa9.08□□□□□ -0.96
HDGFL3-205ENST00000568129 MTUS1Q9ULD2 1270 aa9.08□□□□□ -0.96
HDGFL3-205ENST00000568129 DNM3Q9UQ16 869 aa9.08□□□□□ -0.96
HDGFL3-205ENST00000568129 PCDHB2Q9Y5E7 798 aa9.08□□□□□ -0.96
HDGFL3-205ENST00000568129 VCANP13611 3396 aa9.08□□□□□ -0.96
HDGFL3-205ENST00000568129 CNTNAP2Q9UHC6 1331 aa9.07□□□□□ -0.96
HDGFL3-205ENST00000568129 ARHGEF35A5YM69 484 aa9.07□□□□□ -0.96
HDGFL3-205ENST00000568129 PP2D1A8MPX8 630 aa9.07□□□□□ -0.96
HDGFL3-205ENST00000568129 E9PMD0 336 aa9.07□□□□□ -0.96
HDGFL3-205ENST00000568129 FSCN2O14926 492 aa9.07□□□□□ -0.96
HDGFL3-205ENST00000568129 NCK2O43639 380 aa9.07□□□□□ -0.96
HDGFL3-205ENST00000568129 USO1O60763 962 aaKnown RBP9.07□□□□□ -0.96
HDGFL3-205ENST00000568129 BMP1P13497 986 aa9.07□□□□□ -0.96
HDGFL3-205ENST00000568129 ARF4P18085 180 aaPredicted RBP9.07□□□□□ -0.96
HDGFL3-205ENST00000568129 LAG3P18627 525 aa9.07□□□□□ -0.96
HDGFL3-205ENST00000568129 GUCY2CP25092 1073 aa9.07□□□□□ -0.96
HDGFL3-205ENST00000568129 DNAJB1P25685 340 aa9.07□□□□□ -0.96
HDGFL3-205ENST00000568129 CDC25AP30304 524 aa9.07□□□□□ -0.96
HDGFL3-205ENST00000568129 LONP1P36776 959 aaKnown RBP9.07□□□□□ -0.96
HDGFL3-205ENST00000568129 SLC12A3P55017 1021 aa9.07□□□□□ -0.96
HDGFL3-205ENST00000568129 MRPS5P82675 430 aaKnown RBP9.07□□□□□ -0.96
HDGFL3-205ENST00000568129 MAPK7Q13164 816 aa9.07□□□□□ -0.96
HDGFL3-205ENST00000568129 SF3A1Q15459 793 aaKnown RBP9.07□□□□□ -0.96
HDGFL3-205ENST00000568129 CCDC85BQ15834 202 aaPredicted RBP9.07□□□□□ -0.96
HDGFL3-205ENST00000568129 TIGD5Q53EQ6 642 aa9.07□□□□□ -0.96
HDGFL3-205ENST00000568129 TWF2Q6IBS0 349 aaKnown RBP9.07□□□□□ -0.96
HDGFL3-205ENST00000568129 PDE12Q6L8Q7 609 aaKnown RBP9.07□□□□□ -0.96
HDGFL3-205ENST00000568129 RINT1Q6NUQ1 792 aa9.07□□□□□ -0.96
HDGFL3-205ENST00000568129 NOTUMQ6P988 496 aa9.07□□□□□ -0.96
HDGFL3-205ENST00000568129 AGMOQ6ZNB7 445 aa9.07□□□□□ -0.96
HDGFL3-205ENST00000568129 KCNK18Q7Z418 384 aa9.07□□□□□ -0.96
HDGFL3-205ENST00000568129 KLHL23Q8NBE8 558 aa9.07□□□□□ -0.96
HDGFL3-205ENST00000568129 COLGALT1Q8NBJ5 622 aa9.07□□□□□ -0.96
HDGFL3-205ENST00000568129 SNX29Q8TEQ0 813 aa9.07□□□□□ -0.96
HDGFL3-205ENST00000568129 KIFAP3Q92845 792 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms