RNA–Protein interactions for RNA: ENST00000567947.1

CBFB-208, Transcript of core-binding factor subunit beta, human

TSL 3

Gene CBFB, Length 610 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBFB-208	ENST00000567947	TRPM1	Q7Z4N2	1603 aa		6.15	□□□□□ -1.42
CBFB-208	ENST00000567947	USP32	Q8NFA0	1604 aa		6.15	□□□□□ -1.42
CBFB-208	ENST00000567947	ESYT3	A0FGR9	886 aa		6.15	□□□□□ -1.42
CBFB-208	ENST00000567947	ZNF623	O75123	536 aa		6.15	□□□□□ -1.42
CBFB-208	ENST00000567947	APP	P05067	770 aa		6.15	□□□□□ -1.42
CBFB-208	ENST00000567947	MC4R	P32245	332 aa		6.15	□□□□□ -1.42
CBFB-208	ENST00000567947	NFYC	Q13952	458 aa		6.15	□□□□□ -1.42
CBFB-208	ENST00000567947	EIF4H	Q15056	248 aa	Known RBP	6.15	□□□□□ -1.42
CBFB-208	ENST00000567947	ZMAT1	Q5H9K5	638 aa		6.15	□□□□□ -1.42
CBFB-208	ENST00000567947	FSTL4	Q6MZW2	842 aa		6.15	□□□□□ -1.42
CBFB-208	ENST00000567947	BRINP3	Q76B58	766 aa		6.15	□□□□□ -1.42
CBFB-208	ENST00000567947	OTOP1	Q7RTM1	612 aa		6.15	□□□□□ -1.42
CBFB-208	ENST00000567947		Q8TCH9	128 aa		6.15	□□□□□ -1.42
CBFB-208	ENST00000567947	NEIL1	Q96FI4	390 aa	Predicted RBP	6.15	□□□□□ -1.42
CBFB-208	ENST00000567947	OSBPL2	Q9H1P3	480 aa		6.15	□□□□□ -1.42
CBFB-208	ENST00000567947	TESMIN	Q9Y4I5	508 aa		6.15	□□□□□ -1.42
CBFB-208	ENST00000567947	TRPM3	Q9HCF6	1732 aa	Predicted RBP	6.15	□□□□□ -1.42
CBFB-208	ENST00000567947	NWD2	Q9ULI1	1742 aa		6.15	□□□□□ -1.42
CBFB-208	ENST00000567947	RNF123	Q5XPI4	1314 aa		6.15	□□□□□ -1.43
CBFB-208	ENST00000567947	ALS2	Q96Q42	1657 aa		6.14	□□□□□ -1.43
CBFB-208	ENST00000567947	CRYBG1	Q9Y4K1	1723 aa		6.14	□□□□□ -1.43
CBFB-208	ENST00000567947	KCNK3	O14649	394 aa		6.14	□□□□□ -1.43
CBFB-208	ENST00000567947	TCERG1	O14776	1098 aa	Known RBP	6.14	□□□□□ -1.43
CBFB-208	ENST00000567947	PLD2	O14939	933 aa		6.14	□□□□□ -1.43
CBFB-208	ENST00000567947	NCL	P19338	710 aa	Known RBP	6.14	□□□□□ -1.43
CBFB-208	ENST00000567947	WDR72	Q3MJ13	1102 aa		6.14	□□□□□ -1.43
CBFB-208	ENST00000567947	ZNF568	Q3ZCX4	644 aa		6.14	□□□□□ -1.43
CBFB-208	ENST00000567947	TMEM200B	Q69YZ2	307 aa		6.14	□□□□□ -1.43
CBFB-208	ENST00000567947	TCTN3	Q6NUS6	607 aa		6.14	□□□□□ -1.43
CBFB-208	ENST00000567947	ABHD17C	Q6PCB6	329 aa		6.14	□□□□□ -1.43
CBFB-208	ENST00000567947	LILRB2	Q8N423	598 aa		6.14	□□□□□ -1.43
CBFB-208	ENST00000567947	SREK1	Q8WXA9	508 aa	Known RBP	6.14	□□□□□ -1.43
CBFB-208	ENST00000567947	ASB15	Q8WXK1	588 aa		6.14	□□□□□ -1.43
CBFB-208	ENST00000567947	LRRC59	Q96AG4	307 aa	Known RBP	6.14	□□□□□ -1.43
CBFB-208	ENST00000567947	ASB1	Q9Y576	335 aa		6.14	□□□□□ -1.43
CBFB-208	ENST00000567947	NPHP3	Q7Z494	1330 aa		6.14	□□□□□ -1.43
CBFB-208	ENST00000567947	SBNO1	A3KN83	1393 aa		6.14	□□□□□ -1.43
CBFB-208	ENST00000567947	USP54	Q70EL1	1684 aa		6.14	□□□□□ -1.43
CBFB-208	ENST00000567947	RGPD8	O14715	1765 aa	Predicted RBP	6.13	□□□□□ -1.43
CBFB-208	ENST00000567947	SLC12A8	A0AV02	714 aa		6.13	□□□□□ -1.43
CBFB-208	ENST00000567947	RASSF10	A6NK89	507 aa		6.13	□□□□□ -1.43
CBFB-208	ENST00000567947	FOXS1	O43638	330 aa		6.13	□□□□□ -1.43
CBFB-208	ENST00000567947	MME	P08473	750 aa		6.13	□□□□□ -1.43
CBFB-208	ENST00000567947	ECE1	P42892	770 aa		6.13	□□□□□ -1.43
CBFB-208	ENST00000567947	MECP2	P51608	486 aa	Known RBP	6.13	□□□□□ -1.43
CBFB-208	ENST00000567947	DUSP8	Q13202	625 aa		6.13	□□□□□ -1.43
CBFB-208	ENST00000567947	RNF151	Q2KHN1	245 aa		6.13	□□□□□ -1.43
CBFB-208	ENST00000567947	TMEM177	Q53S58	311 aa		6.13	□□□□□ -1.43
CBFB-208	ENST00000567947	TRIM68	Q6AZZ1	485 aa		6.13	□□□□□ -1.43
CBFB-208	ENST00000567947	FGD2	Q7Z6J4	655 aa		6.13	□□□□□ -1.43
CBFB-208	ENST00000567947	PMFBP1	Q8TBY8	1022 aa		6.13	□□□□□ -1.43
CBFB-208	ENST00000567947	PUS7	Q96PZ0	661 aa	Known RBP	6.13	□□□□□ -1.43
CBFB-208	ENST00000567947	OR10A5	Q9H207	317 aa		6.13	□□□□□ -1.43
CBFB-208	ENST00000567947	TMPRSS5	Q9H3S3	457 aa		6.13	□□□□□ -1.43
CBFB-208	ENST00000567947	TCAF1	Q9Y4C2	921 aa		6.13	□□□□□ -1.43
CBFB-208	ENST00000567947	ZBED9	Q6R2W3	1325 aa		6.13	□□□□□ -1.43
CBFB-208	ENST00000567947	PNPLA6	Q8IY17	1366 aa		6.13	□□□□□ -1.43
CBFB-208	ENST00000567947	EP400	Q96L91	3159 aa		6.13	□□□□□ -1.43
CBFB-208	ENST00000567947	ABCA3	Q99758	1704 aa		6.13	□□□□□ -1.43
CBFB-208	ENST00000567947	SCD	O00767	359 aa		6.12	□□□□□ -1.43
CBFB-208	ENST00000567947	FOXP2	O15409	715 aa		6.12	□□□□□ -1.43
CBFB-208	ENST00000567947	HMGCR	P04035	888 aa		6.12	□□□□□ -1.43
CBFB-208	ENST00000567947	RAC3	P60763	192 aa		6.12	□□□□□ -1.43
CBFB-208	ENST00000567947	ZXDA	P98168	799 aa		6.12	□□□□□ -1.43
CBFB-208	ENST00000567947	CALD1	Q05682	793 aa	Known RBP	6.12	□□□□□ -1.43
CBFB-208	ENST00000567947	NFE2L2	Q16236	605 aa		6.12	□□□□□ -1.43
CBFB-208	ENST00000567947	GNRHR2	Q96P88	292 aa		6.12	□□□□□ -1.43
CBFB-208	ENST00000567947	OAZ3	Q9UMX2	235 aa		6.12	□□□□□ -1.43
CBFB-208	ENST00000567947	SLC30A1	Q9Y6M5	507 aa		6.12	□□□□□ -1.43
CBFB-208	ENST00000567947	ABCC6	O95255	1503 aa		6.11	□□□□□ -1.43
CBFB-208	ENST00000567947	ATP7B	P35670	1465 aa		6.11	□□□□□ -1.43
CBFB-208	ENST00000567947	RALGAPB	Q86X10	1494 aa		6.11	□□□□□ -1.43
CBFB-208	ENST00000567947	POLR3A	O14802	1390 aa	Predicted RBP	6.11	□□□□□ -1.43
CBFB-208	ENST00000567947	MATN2	O00339	956 aa		6.11	□□□□□ -1.43
CBFB-208	ENST00000567947	MUSK	O15146	869 aa		6.11	□□□□□ -1.43
CBFB-208	ENST00000567947	ZBTB48	P10074	688 aa	Predicted RBP	6.11	□□□□□ -1.43
CBFB-208	ENST00000567947	FNDC3B	Q53EP0	1204 aa	Known RBP	6.11	□□□□□ -1.43
CBFB-208	ENST00000567947	CATSPERE	Q5SY80	951 aa		6.11	□□□□□ -1.43
CBFB-208	ENST00000567947	L1TD1	Q5T7N2	865 aa	Known RBP	6.11	□□□□□ -1.43
CBFB-208	ENST00000567947	ZNF585A	Q6P3V2	769 aa		6.11	□□□□□ -1.43
CBFB-208	ENST00000567947	LRSAM1	Q6UWE0	723 aa		6.11	□□□□□ -1.43
CBFB-208	ENST00000567947	LARP4	Q71RC2	724 aa	Known RBP eCLIP	6.11	□□□□□ -1.43
CBFB-208	ENST00000567947	IGSF22	Q8N9C0	903 aa		6.11	□□□□□ -1.43
CBFB-208	ENST00000567947	CFHR4	Q92496	578 aa		6.11	□□□□□ -1.43
CBFB-208	ENST00000567947	GBP4	Q96PP9	640 aa		6.11	□□□□□ -1.43
CBFB-208	ENST00000567947	LRRC37B	Q96QE4	947 aa		6.11	□□□□□ -1.43
CBFB-208	ENST00000567947	MAP7D2	Q96T17	732 aa		6.11	□□□□□ -1.43
CBFB-208	ENST00000567947	DEF6	Q9H4E7	631 aa		6.11	□□□□□ -1.43
CBFB-208	ENST00000567947	UCKL1	Q9NWZ5	548 aa		6.11	□□□□□ -1.43
CBFB-208	ENST00000567947	ZFR2	Q9UPR6	939 aa	Known RBP	6.11	□□□□□ -1.43
CBFB-208	ENST00000567947	LRP6	O75581	1613 aa		6.1	□□□□□ -1.43
CBFB-208	ENST00000567947	SMG6	Q86US8	1419 aa	Known RBP	6.1	□□□□□ -1.43
CBFB-208	ENST00000567947	ARHGEF10	O15013	1369 aa		6.1	□□□□□ -1.43
CBFB-208	ENST00000567947	DISP3	Q9P2K9	1392 aa		6.1	□□□□□ -1.43
CBFB-208	ENST00000567947		A0A0G2JNJ9	132 aa		6.1	□□□□□ -1.43
CBFB-208	ENST00000567947		B4E1Z4	1266 aa		6.1	□□□□□ -1.43
CBFB-208	ENST00000567947	GOLGA6L22	H0YM25	854 aa		6.1	□□□□□ -1.43
CBFB-208	ENST00000567947	ARHGAP6	O43182	974 aa		6.1	□□□□□ -1.43
CBFB-208	ENST00000567947	RAD17	O75943	681 aa		6.1	□□□□□ -1.43
CBFB-208	ENST00000567947	HSP90AA1	P07900	732 aa	Known RBP	6.1	□□□□□ -1.43

Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms