RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 PITPNM2Q9BZ72 1349 aa6.45□□□□□ -1.38
SF3B3-210ENST00000567654 UNCXA6NJT0 531 aa6.44□□□□□ -1.38
SF3B3-210ENST00000567654 C9orf172C9J069 976 aa6.44□□□□□ -1.38
SF3B3-210ENST00000567654 F8W735 103 aaPredicted RBP6.44□□□□□ -1.38
SF3B3-210ENST00000567654 LAD1O00515 517 aa6.44□□□□□ -1.38
SF3B3-210ENST00000567654 ENC1O14682 589 aa6.44□□□□□ -1.38
SF3B3-210ENST00000567654 WDR46O15213 610 aaKnown RBP6.44□□□□□ -1.38
SF3B3-210ENST00000567654 PLA2G6O60733 806 aa6.44□□□□□ -1.38
SF3B3-210ENST00000567654 SLFN14P0C7P3 912 aa6.44□□□□□ -1.38
SF3B3-210ENST00000567654 XRCC5P13010 732 aaKnown RBP6.44□□□□□ -1.38
SF3B3-210ENST00000567654 PLCG1P19174 1290 aa6.44□□□□□ -1.38
SF3B3-210ENST00000567654 STAT3P40763 770 aa6.44□□□□□ -1.38
SF3B3-210ENST00000567654 UBXN2AP68543 259 aa6.44□□□□□ -1.38
SF3B3-210ENST00000567654 GRB10Q13322 594 aa6.44□□□□□ -1.38
SF3B3-210ENST00000567654 ADGRE1Q14246 886 aa6.44□□□□□ -1.38
SF3B3-210ENST00000567654 CALCRLQ16602 461 aa6.44□□□□□ -1.38
SF3B3-210ENST00000567654 MUM1L1Q5H9M0 696 aa6.44□□□□□ -1.38
SF3B3-210ENST00000567654 NOL9Q5SY16 702 aaKnown RBP6.44□□□□□ -1.38
SF3B3-210ENST00000567654 RASIP1Q5U651 963 aa6.44□□□□□ -1.38
SF3B3-210ENST00000567654 DCAF15Q66K64 600 aa6.44□□□□□ -1.38
SF3B3-210ENST00000567654 GPAT2Q6NUI2 795 aa6.44□□□□□ -1.38
SF3B3-210ENST00000567654 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.44□□□□□ -1.38
SF3B3-210ENST00000567654 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.44□□□□□ -1.38
SF3B3-210ENST00000567654 KCNK18Q7Z418 384 aa6.44□□□□□ -1.38
SF3B3-210ENST00000567654 CABP7Q86V35 215 aa6.44□□□□□ -1.38
SF3B3-210ENST00000567654 ALYREFQ86V81 257 aaKnown RBP6.44□□□□□ -1.38
SF3B3-210ENST00000567654 FAM160B2Q86V87 743 aa6.44□□□□□ -1.38
SF3B3-210ENST00000567654 LDHDQ86WU2 507 aa6.44□□□□□ -1.38
SF3B3-210ENST00000567654 PLA2G4DQ86XP0 818 aa6.44□□□□□ -1.38
SF3B3-210ENST00000567654 SMYD4Q8IYR2 804 aaPredicted RBP6.44□□□□□ -1.38
SF3B3-210ENST00000567654 IGSF22Q8N9C0 903 aa6.44□□□□□ -1.38
SF3B3-210ENST00000567654 REPS2Q8NFH8 660 aa6.44□□□□□ -1.38
SF3B3-210ENST00000567654 WFDC12Q8WWY7 111 aa6.44□□□□□ -1.38
SF3B3-210ENST00000567654 CLEC4DQ8WXI8 215 aa6.44□□□□□ -1.38
SF3B3-210ENST00000567654 WNT8BQ93098 351 aa6.44□□□□□ -1.38
SF3B3-210ENST00000567654 HOOK2Q96ED9 719 aa6.44□□□□□ -1.38
SF3B3-210ENST00000567654 FRMD6Q96NE9 622 aa6.44□□□□□ -1.38
SF3B3-210ENST00000567654 NACC1Q96RE7 527 aa6.44□□□□□ -1.38
SF3B3-210ENST00000567654 WDR18Q9BV38 432 aa6.44□□□□□ -1.38
SF3B3-210ENST00000567654 CCSER1Q9C0I3 900 aa6.44□□□□□ -1.38
SF3B3-210ENST00000567654 MRPL18Q9H0U6 180 aaKnown RBP6.44□□□□□ -1.38
SF3B3-210ENST00000567654 RPAP3Q9H6T3 665 aaPredicted RBP6.44□□□□□ -1.38
SF3B3-210ENST00000567654 SH2D4AQ9H788 454 aa6.44□□□□□ -1.38
SF3B3-210ENST00000567654 RRAGDQ9NQL2 400 aaPredicted RBP6.44□□□□□ -1.38
SF3B3-210ENST00000567654 DISC1Q9NRI5 854 aa6.44□□□□□ -1.38
SF3B3-210ENST00000567654 DDX25Q9UHL0 483 aaKnown RBP6.44□□□□□ -1.38
SF3B3-210ENST00000567654 FEM1BQ9UK73 627 aa6.44□□□□□ -1.38
SF3B3-210ENST00000567654 MGAMO43451 1857 aa6.43□□□□□ -1.38
SF3B3-210ENST00000567654 IGLV3-22A0A075B6J6 115 aa6.43□□□□□ -1.38
SF3B3-210ENST00000567654 CYP3A7-CYP3A51PA0A087WV96 503 aa6.43□□□□□ -1.38
SF3B3-210ENST00000567654 RBM47A0AV96 593 aaKnown RBP6.43□□□□□ -1.38
SF3B3-210ENST00000567654 FAM86B1E9PN63 330 aa6.43□□□□□ -1.38
SF3B3-210ENST00000567654 NFIBO00712 420 aa6.43□□□□□ -1.38
SF3B3-210ENST00000567654 KLRC4O43908 158 aa6.43□□□□□ -1.38
SF3B3-210ENST00000567654 PEX10O60683 326 aa6.43□□□□□ -1.38
SF3B3-210ENST00000567654 COBLO75128 1261 aa6.43□□□□□ -1.38
SF3B3-210ENST00000567654 CFBP00751 764 aa6.43□□□□□ -1.38
SF3B3-210ENST00000567654 FAM86B2P0C5J1 330 aa6.43□□□□□ -1.38
SF3B3-210ENST00000567654 CYP3A7P24462 503 aa6.43□□□□□ -1.38
SF3B3-210ENST00000567654 SREBF1P36956 1147 aa6.43□□□□□ -1.38
SF3B3-210ENST00000567654 STAT6P42226 847 aa6.43□□□□□ -1.38
SF3B3-210ENST00000567654 ZNF75DP51815 510 aa6.43□□□□□ -1.38
SF3B3-210ENST00000567654 HMGCS2P54868 508 aa6.43□□□□□ -1.38
SF3B3-210ENST00000567654 BACE1P56817 501 aa6.43□□□□□ -1.38
SF3B3-210ENST00000567654 AP3B2Q13367 1082 aa6.43□□□□□ -1.38
SF3B3-210ENST00000567654 ORC2Q13416 577 aaPredicted RBP6.43□□□□□ -1.38
SF3B3-210ENST00000567654 VGLL4Q14135 290 aa6.43□□□□□ -1.38
SF3B3-210ENST00000567654 POU4F3Q15319 338 aa6.43□□□□□ -1.38
SF3B3-210ENST00000567654 ZRSR1Q15695 479 aaKnown RBP6.43□□□□□ -1.38
SF3B3-210ENST00000567654 RPS26P11Q5JNZ5 115 aaPredicted RBP6.43□□□□□ -1.38
SF3B3-210ENST00000567654 PPP4R3AQ6IN85 833 aa6.43□□□□□ -1.38
SF3B3-210ENST00000567654 CEP57L1Q8IYX8 460 aa6.43□□□□□ -1.38
SF3B3-210ENST00000567654 CYP2W1Q8TAV3 490 aa6.43□□□□□ -1.38
SF3B3-210ENST00000567654 ETNPPLQ8TBG4 499 aa6.43□□□□□ -1.38
SF3B3-210ENST00000567654 CHURC1Q8WUH1 139 aa6.43□□□□□ -1.38
SF3B3-210ENST00000567654 SMARCE1Q969G3 411 aa6.43□□□□□ -1.38
SF3B3-210ENST00000567654 ATG4CQ96DT6 458 aa6.43□□□□□ -1.38
SF3B3-210ENST00000567654 CLMNQ96JQ2 1002 aa6.43□□□□□ -1.38
SF3B3-210ENST00000567654 MEGF10Q96KG7 1140 aa6.43□□□□□ -1.38
SF3B3-210ENST00000567654 C12orf42Q96LP6 360 aa6.43□□□□□ -1.38
SF3B3-210ENST00000567654 NECAB3Q96P71 396 aaPredicted RBP6.43□□□□□ -1.38
SF3B3-210ENST00000567654 SLF1Q9BQI6 1058 aa6.43□□□□□ -1.38
SF3B3-210ENST00000567654 BPIFA3Q9BQP9 254 aa6.43□□□□□ -1.38
SF3B3-210ENST00000567654 TANGO6Q9C0B7 1094 aa6.43□□□□□ -1.38
SF3B3-210ENST00000567654 SOX17Q9H6I2 414 aaPredicted RBP6.43□□□□□ -1.38
SF3B3-210ENST00000567654 AKTIPQ9H8T0 292 aa6.43□□□□□ -1.38
SF3B3-210ENST00000567654 SLC38A10Q9HBR0 1119 aa6.43□□□□□ -1.38
SF3B3-210ENST00000567654 RAVER2Q9HCJ3 691 aaKnown RBP6.43□□□□□ -1.38
SF3B3-210ENST00000567654 KCNMB3Q9NPA1 279 aa6.43□□□□□ -1.38
SF3B3-210ENST00000567654 GINM1Q9NU53 330 aa6.43□□□□□ -1.38
SF3B3-210ENST00000567654 BLOC1S4Q9NUP1 217 aa6.43□□□□□ -1.38
SF3B3-210ENST00000567654 TMEM39AQ9NV64 488 aa6.43□□□□□ -1.38
SF3B3-210ENST00000567654 PPP1R9AQ9ULJ8 1098 aa6.43□□□□□ -1.38
SF3B3-210ENST00000567654 RIPK3Q9Y572 518 aa6.43□□□□□ -1.38
SF3B3-210ENST00000567654 PPP2R3BQ9Y5P8 575 aa6.43□□□□□ -1.38
SF3B3-210ENST00000567654 ZHX2Q9Y6X8 837 aa6.43□□□□□ -1.38
SF3B3-210ENST00000567654 ABCB11O95342 1321 aa6.43□□□□□ -1.38
SF3B3-210ENST00000567654 SIP14410 1827 aa6.43□□□□□ -1.38
SF3B3-210ENST00000567654 ZSWIM8A7E2V4 1837 aa6.42□□□□□ -1.38
SF3B3-210ENST00000567654 MSH4O15457 936 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms