RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 PCDH8O95206 1070 aa4.92□□□□□ -1.62
CDH1-211ENST00000567320 TGM1P22735 817 aa4.92□□□□□ -1.62
CDH1-211ENST00000567320 RABGGTBP53611 331 aa4.92□□□□□ -1.62
CDH1-211ENST00000567320 SPIDRQ14159 915 aa4.92□□□□□ -1.62
CDH1-211ENST00000567320 NFE2L2Q16236 605 aa4.92□□□□□ -1.62
CDH1-211ENST00000567320 KRTAP15-1Q3LI76 137 aa4.92□□□□□ -1.62
CDH1-211ENST00000567320 CDCA2Q69YH5 1023 aaPredicted RBP4.92□□□□□ -1.62
CDH1-211ENST00000567320 ZNF575Q86XF7 245 aa4.92□□□□□ -1.62
CDH1-211ENST00000567320 RPUSD2Q8IZ73 545 aaKnown RBP4.92□□□□□ -1.62
CDH1-211ENST00000567320 CPT1CQ8TCG5 803 aa4.92□□□□□ -1.62
CDH1-211ENST00000567320 MRFAP1L1Q96HT8 127 aa4.92□□□□□ -1.62
CDH1-211ENST00000567320 HIST1H2AHQ96KK5 128 aa4.92□□□□□ -1.62
CDH1-211ENST00000567320 HIST1H2AJQ99878 128 aa4.92□□□□□ -1.62
CDH1-211ENST00000567320 CPPED1Q9BRF8 314 aaPredicted RBP4.92□□□□□ -1.62
CDH1-211ENST00000567320 IFT57Q9NWB7 429 aa4.92□□□□□ -1.62
CDH1-211ENST00000567320 CDK11AQ9UQ88 783 aaPredicted RBP4.92□□□□□ -1.62
CDH1-211ENST00000567320 CBX4O00257 560 aa4.91□□□□□ -1.62
CDH1-211ENST00000567320 PPP1R12AO14974 1030 aaPredicted RBP4.91□□□□□ -1.62
CDH1-211ENST00000567320 GAS7O60861 476 aa4.91□□□□□ -1.62
CDH1-211ENST00000567320 OPHN1O60890 802 aa4.91□□□□□ -1.62
CDH1-211ENST00000567320 STC2O76061 302 aa4.91□□□□□ -1.62
CDH1-211ENST00000567320 SCAF4O95104 1147 aaKnown RBP4.91□□□□□ -1.62
CDH1-211ENST00000567320 NEK4P51957 841 aa4.91□□□□□ -1.62
CDH1-211ENST00000567320 PTPAQ15257 358 aa4.91□□□□□ -1.62
CDH1-211ENST00000567320 FAM214AQ32MH5 1076 aa4.91□□□□□ -1.62
CDH1-211ENST00000567320 LY6G5CQ5SRR4 150 aa4.91□□□□□ -1.62
CDH1-211ENST00000567320 KIAA1841Q6NSI8 718 aa4.91□□□□□ -1.62
CDH1-211ENST00000567320 ESRP1Q6NXG1 681 aaKnown RBP4.91□□□□□ -1.62
CDH1-211ENST00000567320 KCNV1Q6PIU1 500 aa4.91□□□□□ -1.62
CDH1-211ENST00000567320 UNQ6494/PRO21346Q6UXR6 183 aa4.91□□□□□ -1.62
CDH1-211ENST00000567320 MRGPREQ86SM8 312 aa4.91□□□□□ -1.62
CDH1-211ENST00000567320 VRK3Q8IV63 474 aa4.91□□□□□ -1.62
CDH1-211ENST00000567320 MDGA1Q8NFP4 955 aa4.91□□□□□ -1.62
CDH1-211ENST00000567320 OR5M3Q8NGP4 307 aa4.91□□□□□ -1.62
CDH1-211ENST00000567320 PROKR1Q8TCW9 393 aa4.91□□□□□ -1.62
CDH1-211ENST00000567320 OXSMQ9NWU1 459 aa4.91□□□□□ -1.62
CDH1-211ENST00000567320 ING3Q9NXR8 418 aa4.91□□□□□ -1.62
CDH1-211ENST00000567320 PODXL2Q9NZ53 605 aa4.91□□□□□ -1.62
CDH1-211ENST00000567320 EIF2B4Q9UI10 523 aaKnown RBP4.91□□□□□ -1.62
CDH1-211ENST00000567320 HDAC5Q9UQL6 1122 aa4.91□□□□□ -1.62
CDH1-211ENST00000567320 SPO11Q9Y5K1 396 aa4.91□□□□□ -1.62
CDH1-211ENST00000567320 A0A0A6YYJ9 748 aa4.9□□□□□ -1.63
CDH1-211ENST00000567320 ST20-MTHFSA0A0A6YYL1 179 aa4.9□□□□□ -1.63
CDH1-211ENST00000567320 ASMTLO95671 621 aa4.9□□□□□ -1.63
CDH1-211ENST00000567320 ABHD16AO95870 558 aa4.9□□□□□ -1.63
CDH1-211ENST00000567320 KRT4P19013 534 aa4.9□□□□□ -1.63
CDH1-211ENST00000567320 SDSP20132 328 aa4.9□□□□□ -1.63
CDH1-211ENST00000567320 DPY19L2P1Q6NXN4 242 aa4.9□□□□□ -1.63
CDH1-211ENST00000567320 PASD1Q8IV76 773 aa4.9□□□□□ -1.63
CDH1-211ENST00000567320 ZZZ3Q8IYH5 903 aa4.9□□□□□ -1.63
CDH1-211ENST00000567320 FERMT2Q96AC1 680 aa4.9□□□□□ -1.63
CDH1-211ENST00000567320 USP18Q9UMW8 372 aa4.9□□□□□ -1.63
CDH1-211ENST00000567320 NRP1O14786 923 aa4.89□□□□□ -1.63
CDH1-211ENST00000567320 KPNA6O60684 536 aa4.89□□□□□ -1.63
CDH1-211ENST00000567320 ALDH1A2O94788 518 aa4.89□□□□□ -1.63
CDH1-211ENST00000567320 NUDT3O95989 172 aa4.89□□□□□ -1.63
CDH1-211ENST00000567320 GCP02774 474 aa4.89□□□□□ -1.63
CDH1-211ENST00000567320 GYPEP15421 78 aa4.89□□□□□ -1.63
CDH1-211ENST00000567320 CD40P25942 277 aa4.89□□□□□ -1.63
CDH1-211ENST00000567320 TIGD2Q4W5G0 525 aa4.89□□□□□ -1.63
CDH1-211ENST00000567320 MBNL2Q5VZF2 373 aaKnown RBP4.89□□□□□ -1.63
CDH1-211ENST00000567320 SH3TC2Q8TF17 1288 aa4.89□□□□□ -1.63
CDH1-211ENST00000567320 OSBPL6Q9BZF3 934 aa4.89□□□□□ -1.63
CDH1-211ENST00000567320 PITHD1Q9GZP4 211 aaPredicted RBP4.89□□□□□ -1.63
CDH1-211ENST00000567320 H2AFY2Q9P0M6 372 aaPredicted RBP4.89□□□□□ -1.63
CDH1-211ENST00000567320 TRPS1Q9UHF7 1281 aa4.89□□□□□ -1.63
CDH1-211ENST00000567320 HOXA3O43365 443 aaPredicted RBP4.88□□□□□ -1.63
CDH1-211ENST00000567320 PPFIA4O75335 1185 aa4.88□□□□□ -1.63
CDH1-211ENST00000567320 RHOBTB3O94955 611 aa4.88□□□□□ -1.63
CDH1-211ENST00000567320 XPAP23025 273 aaPredicted RBP4.88□□□□□ -1.63
CDH1-211ENST00000567320 CASRP41180 1078 aa4.88□□□□□ -1.63
CDH1-211ENST00000567320 PABPC4Q13310 644 aaKnown RBP eCLIP4.88□□□□□ -1.63
CDH1-211ENST00000567320 SQSTM1Q13501 440 aa4.88□□□□□ -1.63
CDH1-211ENST00000567320 Q6ZPA2 131 aa4.88□□□□□ -1.63
CDH1-211ENST00000567320 KANSL1Q7Z3B3 1105 aa4.88□□□□□ -1.63
CDH1-211ENST00000567320 APBB1IPQ7Z5R6 666 aaPredicted RBP4.88□□□□□ -1.63
CDH1-211ENST00000567320 MLST8Q9BVC4 326 aa4.88□□□□□ -1.63
CDH1-211ENST00000567320 HAPLN2Q9GZV7 340 aa4.88□□□□□ -1.63
CDH1-211ENST00000567320 ZSWIM4Q9H7M6 989 aa4.88□□□□□ -1.63
CDH1-211ENST00000567320 MYPNQ86TC9 1320 aa4.88□□□□□ -1.63
CDH1-211ENST00000567320 MTSS1O43312 755 aa4.87□□□□□ -1.63
CDH1-211ENST00000567320 ITGB1P05556 798 aa4.87□□□□□ -1.63
CDH1-211ENST00000567320 GAAP10253 952 aa4.87□□□□□ -1.63
CDH1-211ENST00000567320 ATP2A2P16615 1042 aaKnown RBP4.87□□□□□ -1.63
CDH1-211ENST00000567320 CD69Q07108 199 aa4.87□□□□□ -1.63
CDH1-211ENST00000567320 SART3Q15020 963 aaKnown RBP4.87□□□□□ -1.63
CDH1-211ENST00000567320 C21orf62-AS1Q17RA5 79 aa4.87□□□□□ -1.63
CDH1-211ENST00000567320 DCAF17Q5H9S7 520 aaPredicted RBP4.87□□□□□ -1.63
CDH1-211ENST00000567320 C1QL3Q5VWW1 255 aa4.87□□□□□ -1.63
CDH1-211ENST00000567320 PCSK4Q6UW60 755 aa4.87□□□□□ -1.63
CDH1-211ENST00000567320 ESPNLQ6ZVH7 1005 aa4.87□□□□□ -1.63
CDH1-211ENST00000567320 FAM83AQ86UY5 434 aa4.87□□□□□ -1.63
CDH1-211ENST00000567320 NXPE1Q8N323 547 aa4.87□□□□□ -1.63
CDH1-211ENST00000567320 GLB1L3Q8NCI6 653 aaPredicted RBP4.87□□□□□ -1.63
CDH1-211ENST00000567320 GPR150Q8NGU9 434 aa4.87□□□□□ -1.63
CDH1-211ENST00000567320 LENG9Q96B70 501 aa4.87□□□□□ -1.63
CDH1-211ENST00000567320 RIOX1Q9H6W3 641 aa4.87□□□□□ -1.63
CDH1-211ENST00000567320 CYP4F11Q9HBI6 524 aa4.87□□□□□ -1.63
CDH1-211ENST00000567320 THG1LQ9NWX6 298 aaKnown RBP4.87□□□□□ -1.63
CDH1-211ENST00000567320 MAGEC2Q9UBF1 373 aaPredicted RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms