RNA–Protein interactions for RNA: ENST00000567271.1

NME3-210, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-210ENST00000567271 LRRC15Q8TF66 581 aa23.96■■□□□ 1.43
NME3-210ENST00000567271 MYLIPQ8WY64 445 aa23.96■■□□□ 1.43
NME3-210ENST00000567271 TGS1Q96RS0 853 aaKnown RBP23.96■■□□□ 1.43
NME3-210ENST00000567271 DAXXQ9UER7 740 aaPredicted RBP23.96■■□□□ 1.43
NME3-210ENST00000567271 LRRIQ4A6NIV6 560 aa23.95■■□□□ 1.42
NME3-210ENST00000567271 PPP6R2O75170 966 aa23.95■■□□□ 1.42
NME3-210ENST00000567271 SSBP05455 408 aaKnown RBP eCLIP23.95■■□□□ 1.42
NME3-210ENST00000567271 PLCG1P19174 1290 aa23.95■■□□□ 1.42
NME3-210ENST00000567271 NAMPTP43490 491 aa23.95■■□□□ 1.42
NME3-210ENST00000567271 CDCA2Q69YH5 1023 aaPredicted RBP23.95■■□□□ 1.42
NME3-210ENST00000567271 ECHDC2Q86YB7 292 aa23.95■■□□□ 1.42
NME3-210ENST00000567271 DAW1Q8N136 415 aa23.95■■□□□ 1.42
NME3-210ENST00000567271 FIBCD1Q8N539 461 aa23.95■■□□□ 1.42
NME3-210ENST00000567271 RASSF8Q8NHQ8 419 aa23.95■■□□□ 1.42
NME3-210ENST00000567271 ARNTL2Q8WYA1 636 aa23.95■■□□□ 1.42
NME3-210ENST00000567271 SYMPKQ92797 1274 aaKnown RBP23.95■■□□□ 1.42
NME3-210ENST00000567271 BLOC1S4Q9NUP1 217 aa23.95■■□□□ 1.42
NME3-210ENST00000567271 STXBP5LQ9Y2K9 1186 aa23.95■■□□□ 1.42
NME3-210ENST00000567271 TSPAN1O60635 241 aa23.94■■□□□ 1.42
NME3-210ENST00000567271 HIP1RO75146 1068 aa23.94■■□□□ 1.42
NME3-210ENST00000567271 ERLIN2O94905 339 aa23.94■■□□□ 1.42
NME3-210ENST00000567271 GUCY2CP25092 1073 aa23.94■■□□□ 1.42
NME3-210ENST00000567271 BTG3Q14201 252 aaPredicted RBP23.94■■□□□ 1.42
NME3-210ENST00000567271 PPP2R5AQ15172 486 aa23.94■■□□□ 1.42
NME3-210ENST00000567271 AMHR2Q16671 573 aa23.94■■□□□ 1.42
NME3-210ENST00000567271 TWF2Q6IBS0 349 aaKnown RBP23.94■■□□□ 1.42
NME3-210ENST00000567271 ZNF598Q86UK7 904 aaKnown RBP23.94■■□□□ 1.42
NME3-210ENST00000567271 CMTR2Q8IYT2 770 aaKnown RBP23.94■■□□□ 1.42
NME3-210ENST00000567271 IFT74Q96LB3 600 aa23.94■■□□□ 1.42
NME3-210ENST00000567271 TIPINQ9BVW5 301 aa23.94■■□□□ 1.42
NME3-210ENST00000567271 MYO9BQ13459 2157 aa23.93■■□□□ 1.42
NME3-210ENST00000567271 EPOPA6NHQ4 379 aa23.93■■□□□ 1.42
NME3-210ENST00000567271 EOMESO95936 686 aa23.93■■□□□ 1.42
NME3-210ENST00000567271 AXLP30530 894 aa23.93■■□□□ 1.42
NME3-210ENST00000567271 GATMP50440 423 aa23.93■■□□□ 1.42
NME3-210ENST00000567271 ZBTB8OSQ8IWT0 167 aa23.93■■□□□ 1.42
NME3-210ENST00000567271 RAD54LQ92698 747 aa23.93■■□□□ 1.42
NME3-210ENST00000567271 C17orf80Q9BSJ5 609 aa23.93■■□□□ 1.42
NME3-210ENST00000567271 C2orf40Q9H1Z8 148 aa23.93■■□□□ 1.42
NME3-210ENST00000567271 KCND2Q9NZV8 630 aa23.93■■□□□ 1.42
NME3-210ENST00000567271 CCDC39Q9UFE4 941 aa23.93■■□□□ 1.42
NME3-210ENST00000567271 CFAP45Q9UL16 551 aa23.93■■□□□ 1.42
NME3-210ENST00000567271 MTUS1Q9ULD2 1270 aa23.93■■□□□ 1.42
NME3-210ENST00000567271 RFXAPO00287 272 aa23.92■■□□□ 1.42
NME3-210ENST00000567271 FGFR1P11362 822 aa23.92■■□□□ 1.42
NME3-210ENST00000567271 SKIP12755 728 aa23.92■■□□□ 1.42
NME3-210ENST00000567271 TXLNAP40222 546 aa23.92■■□□□ 1.42
NME3-210ENST00000567271 DNM1Q05193 864 aaKnown RBP23.92■■□□□ 1.42
NME3-210ENST00000567271 NCBP1Q09161 790 aaKnown RBP23.92■■□□□ 1.42
NME3-210ENST00000567271 MAPK7Q13164 816 aa23.92■■□□□ 1.42
NME3-210ENST00000567271 ADGRE1Q14246 886 aa23.92■■□□□ 1.42
NME3-210ENST00000567271 ARSHQ5FYA8 562 aa23.92■■□□□ 1.42
NME3-210ENST00000567271 DEPTORQ8TB45 409 aa23.92■■□□□ 1.42
NME3-210ENST00000567271 DRC1Q96MC2 740 aa23.92■■□□□ 1.42
NME3-210ENST00000567271 SAMD11Q96NU1 681 aa23.92■■□□□ 1.42
NME3-210ENST00000567271 GAS2L1Q99501 681 aaPredicted RBP23.92■■□□□ 1.42
NME3-210ENST00000567271 FZD8Q9H461 694 aa23.92■■□□□ 1.42
NME3-210ENST00000567271 ZNF623O75123 536 aa23.91■■□□□ 1.42
NME3-210ENST00000567271 LINC00271P0C7V0 271 aa23.91■■□□□ 1.42
NME3-210ENST00000567271 FOSL2P15408 326 aa23.91■■□□□ 1.42
NME3-210ENST00000567271 ATF7P17544 494 aaPredicted RBP23.91■■□□□ 1.42
NME3-210ENST00000567271 DDIT3P35638 169 aa23.91■■□□□ 1.42
NME3-210ENST00000567271 RAB27AP51159 221 aa23.91■■□□□ 1.42
NME3-210ENST00000567271 MCM6Q14566 821 aa23.91■■□□□ 1.42
NME3-210ENST00000567271 PAN2Q504Q3 1202 aaKnown RBP23.91■■□□□ 1.42
NME3-210ENST00000567271 UBXN11Q5T124 520 aa23.91■■□□□ 1.42
NME3-210ENST00000567271 PPP4R3CPQ6ZMV5 832 aa23.91■■□□□ 1.42
NME3-210ENST00000567271 RNF169Q8NCN4 708 aa23.91■■□□□ 1.42
NME3-210ENST00000567271 CLP1Q92989 425 aaKnown RBP23.91■■□□□ 1.42
NME3-210ENST00000567271 C17orf75Q9HAS0 396 aa23.91■■□□□ 1.42
NME3-210ENST00000567271 FAM105AQ9NUU6 356 aa23.91■■□□□ 1.42
NME3-210ENST00000567271 RNF19AQ9NV58 838 aa23.91■■□□□ 1.42
NME3-210ENST00000567271 PRMT7Q9NVM4 692 aaPredicted RBP23.91■■□□□ 1.42
NME3-210ENST00000567271 TBKBP1A7MCY6 615 aa23.9■■□□□ 1.42
NME3-210ENST00000567271 HOXA2O43364 376 aa23.9■■□□□ 1.42
NME3-210ENST00000567271 CUTAO60888 179 aa23.9■■□□□ 1.42
NME3-210ENST00000567271 ARF4P18085 180 aaPredicted RBP23.9■■□□□ 1.42
NME3-210ENST00000567271 PEX3P56589 373 aa23.9■■□□□ 1.42
NME3-210ENST00000567271 RAD51AP2Q09MP3 1159 aa23.9■■□□□ 1.42
NME3-210ENST00000567271 FAM187BQ17R55 369 aa23.9■■□□□ 1.42
NME3-210ENST00000567271 EPC2Q52LR7 807 aa23.9■■□□□ 1.42
NME3-210ENST00000567271 TMEM192Q8IY95 271 aa23.9■■□□□ 1.42
NME3-210ENST00000567271 KCNG4Q8TDN1 519 aa23.9■■□□□ 1.42
NME3-210ENST00000567271 LARP4BQ92615 738 aaKnown RBP23.9■■□□□ 1.42
NME3-210ENST00000567271 CCDC51Q96ER9 411 aa23.9■■□□□ 1.42
NME3-210ENST00000567271 CPB2Q96IY4 423 aa23.9■■□□□ 1.42
NME3-210ENST00000567271 PRIMPOLQ96LW4 560 aa23.9■■□□□ 1.42
NME3-210ENST00000567271 KIFC3Q9BVG8 833 aa23.9■■□□□ 1.42
NME3-210ENST00000567271 CCDC113Q9H0I3 377 aa23.9■■□□□ 1.42
NME3-210ENST00000567271 MRPL42Q9Y6G3 142 aaKnown RBP23.9■■□□□ 1.42
NME3-210ENST00000567271 NPHP3-ACAD11A0A0J9YXS1 232 aa23.89■■□□□ 1.41
NME3-210ENST00000567271 SFI1A8K8P3 1242 aa23.89■■□□□ 1.41
NME3-210ENST00000567271 B4GALT5O43286 388 aa23.89■■□□□ 1.41
NME3-210ENST00000567271 NPTX2P47972 431 aa23.89■■□□□ 1.41
NME3-210ENST00000567271 EFNA5P52803 228 aa23.89■■□□□ 1.41
NME3-210ENST00000567271 DHX8Q14562 1220 aaKnown RBP23.89■■□□□ 1.41
NME3-210ENST00000567271 RRAGBQ5VZM2 374 aa23.89■■□□□ 1.41
NME3-210ENST00000567271 NOTUMQ6P988 496 aa23.89■■□□□ 1.41
NME3-210ENST00000567271 MRPL10Q7Z7H8 261 aaKnown RBP23.89■■□□□ 1.41
NME3-210ENST00000567271 GPBP1Q86WP2 473 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms