RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 BMS1Q14692 1282 aaKnown RBP17.43■□□□□ 0.38
PALB2-205ENST00000567003 PTPN14Q15678 1187 aa17.43■□□□□ 0.38
PALB2-205ENST00000567003 NOMO2Q5JPE7 1267 aa17.43■□□□□ 0.38
PALB2-205ENST00000567003 MCTP2Q6DN12 878 aa17.43■□□□□ 0.38
PALB2-205ENST00000567003 MIER3Q7Z3K6 550 aa17.43■□□□□ 0.38
PALB2-205ENST00000567003 DDX53Q86TM3 631 aaKnown RBP17.43■□□□□ 0.38
PALB2-205ENST00000567003 ZNF280BQ86YH2 543 aa17.43■□□□□ 0.38
PALB2-205ENST00000567003 RHPN2Q8IUC4 686 aa17.43■□□□□ 0.38
PALB2-205ENST00000567003 ZNF710Q8N1W2 664 aa17.43■□□□□ 0.38
PALB2-205ENST00000567003 SLC26A6Q9BXS9 759 aa17.43■□□□□ 0.38
PALB2-205ENST00000567003 FAM105AQ9NUU6 356 aa17.43■□□□□ 0.38
PALB2-205ENST00000567003 NID2Q14112 1375 aa17.42■□□□□ 0.38
PALB2-205ENST00000567003 CCDC196A0A1B0GTZ2 297 aa17.42■□□□□ 0.38
PALB2-205ENST00000567003 SPDYE4A6NLX3 237 aa17.42■□□□□ 0.38
PALB2-205ENST00000567003 PI15O43692 258 aa17.42■□□□□ 0.38
PALB2-205ENST00000567003 OFD1O75665 1012 aa17.42■□□□□ 0.38
PALB2-205ENST00000567003 TDP2O95551 362 aa17.42■□□□□ 0.38
PALB2-205ENST00000567003 SFPQP23246 707 aaKnown RBP eCLIP17.42■□□□□ 0.38
PALB2-205ENST00000567003 AFF1P51825 1210 aaKnown RBP17.42■□□□□ 0.38
PALB2-205ENST00000567003 POLGP54098 1239 aaPredicted RBP17.42■□□□□ 0.38
PALB2-205ENST00000567003 RNASELQ05823 741 aaKnown RBP17.42■□□□□ 0.38
PALB2-205ENST00000567003 KRT32Q14532 448 aa17.42■□□□□ 0.38
PALB2-205ENST00000567003 GLB1LQ6UWU2 654 aa17.42■□□□□ 0.38
PALB2-205ENST00000567003 NLRP4Q96MN2 994 aa17.42■□□□□ 0.38
PALB2-205ENST00000567003 JAKMIP1Q96N16 626 aaKnown RBP17.42■□□□□ 0.38
PALB2-205ENST00000567003 RIT2Q99578 217 aa17.42■□□□□ 0.38
PALB2-205ENST00000567003 CYP26B1Q9NR63 512 aa17.42■□□□□ 0.38
PALB2-205ENST00000567003 CHST12Q9NRB3 414 aa17.42■□□□□ 0.38
PALB2-205ENST00000567003 SUCLA2Q9P2R7 463 aaPredicted RBP17.42■□□□□ 0.38
PALB2-205ENST00000567003 IRAK3Q9Y616 596 aa17.42■□□□□ 0.38
PALB2-205ENST00000567003 IGKV6-21A0A0C4DH24 114 aa17.41■□□□□ 0.38
PALB2-205ENST00000567003 PSMD10O75832 226 aa17.41■□□□□ 0.38
PALB2-205ENST00000567003 MYBP10242 640 aa17.41■□□□□ 0.38
PALB2-205ENST00000567003 NPR3P17342 541 aa17.41■□□□□ 0.38
PALB2-205ENST00000567003 SFNP31947 248 aa17.41■□□□□ 0.38
PALB2-205ENST00000567003 AKAP17AQ02040 695 aaKnown RBP17.41■□□□□ 0.38
PALB2-205ENST00000567003 NTRK3Q16288 839 aa17.41■□□□□ 0.38
PALB2-205ENST00000567003 BMP2KLQ5H9B9 411 aa17.41■□□□□ 0.38
PALB2-205ENST00000567003 PLA2G4FQ68DD2 849 aa17.41■□□□□ 0.38
PALB2-205ENST00000567003 CATSPER4Q7RTX7 472 aa17.41■□□□□ 0.38
PALB2-205ENST00000567003 GPR149Q86SP6 731 aa17.41■□□□□ 0.38
PALB2-205ENST00000567003 PLCD3Q8N3E9 789 aa17.41■□□□□ 0.38
PALB2-205ENST00000567003 BICD2Q8TD16 824 aa17.41■□□□□ 0.38
PALB2-205ENST00000567003 NIFKQ9BYG3 293 aaKnown RBP17.41■□□□□ 0.38
PALB2-205ENST00000567003 NCOA5Q9HCD5 579 aaKnown RBP17.41■□□□□ 0.38
PALB2-205ENST00000567003 USTQ9Y2C2 406 aa17.41■□□□□ 0.38
PALB2-205ENST00000567003 ZNF292O60281 2723 aa17.4■□□□□ 0.38
PALB2-205ENST00000567003 DDX11L8A8MPP1 907 aa17.4■□□□□ 0.38
PALB2-205ENST00000567003 DDHD2O94830 711 aa17.4■□□□□ 0.38
PALB2-205ENST00000567003 CLCN5P51795 746 aa17.4■□□□□ 0.38
PALB2-205ENST00000567003 XKR3Q5GH77 459 aa17.4■□□□□ 0.38
PALB2-205ENST00000567003 CCDC149Q6ZUS6 474 aa17.4■□□□□ 0.38
PALB2-205ENST00000567003 CCDC148Q8NFR7 591 aa17.4■□□□□ 0.38
PALB2-205ENST00000567003 TBCKQ8TEA7 893 aa17.4■□□□□ 0.38
PALB2-205ENST00000567003 KLHL5Q96PQ7 755 aa17.4■□□□□ 0.38
PALB2-205ENST00000567003 TRAIPQ9BWF2 469 aa17.4■□□□□ 0.38
PALB2-205ENST00000567003 SFXN1Q9H9B4 322 aa17.4■□□□□ 0.38
PALB2-205ENST00000567003 DMXL1Q9Y485 3027 aa17.4■□□□□ 0.38
PALB2-205ENST00000567003 EP300Q09472 2414 aaPredicted RBP17.39■□□□□ 0.37
PALB2-205ENST00000567003 C2CD2LO14523 706 aa17.39■□□□□ 0.37
PALB2-205ENST00000567003 NARSO43776 548 aaKnown RBP17.39■□□□□ 0.37
PALB2-205ENST00000567003 HMGB1P09429 215 aaKnown RBP17.39■□□□□ 0.37
PALB2-205ENST00000567003 CNPP09543 421 aaKnown RBP17.39■□□□□ 0.37
PALB2-205ENST00000567003 KLRC2P26717 231 aa17.39■□□□□ 0.37
PALB2-205ENST00000567003 CLCN4P51793 760 aa17.39■□□□□ 0.37
PALB2-205ENST00000567003 CCT2P78371 535 aaKnown RBP17.39■□□□□ 0.37
PALB2-205ENST00000567003 GIT2Q14161 759 aa17.39■□□□□ 0.37
PALB2-205ENST00000567003 B3GNT9Q6UX72 402 aa17.39■□□□□ 0.37
PALB2-205ENST00000567003 AGMOQ6ZNB7 445 aa17.39■□□□□ 0.37
PALB2-205ENST00000567003 NKD2Q969F2 451 aaPredicted RBP17.39■□□□□ 0.37
PALB2-205ENST00000567003 ACSF2Q96CM8 615 aaPredicted RBP17.39■□□□□ 0.37
PALB2-205ENST00000567003 BMP2KQ9NSY1 1161 aaPredicted RBP17.39■□□□□ 0.37
PALB2-205ENST00000567003 PCDHB2Q9Y5E7 798 aa17.39■□□□□ 0.37
PALB2-205ENST00000567003 FRYLO94915 3013 aa17.38■□□□□ 0.37
PALB2-205ENST00000567003 N4BP1O75113 896 aaKnown RBP17.38■□□□□ 0.37
PALB2-205ENST00000567003 MAFO75444 373 aaPredicted RBP17.38■□□□□ 0.37
PALB2-205ENST00000567003 DNM2P50570 870 aa17.38■□□□□ 0.37
PALB2-205ENST00000567003 USP11P51784 963 aa17.38■□□□□ 0.37
PALB2-205ENST00000567003 NLRP5P59047 1200 aa17.38■□□□□ 0.37
PALB2-205ENST00000567003 TDGQ13569 410 aa17.38■□□□□ 0.37
PALB2-205ENST00000567003 Q4G0T1 1027 aa17.38■□□□□ 0.37
PALB2-205ENST00000567003 ANO5Q75V66 913 aa17.38■□□□□ 0.37
PALB2-205ENST00000567003 OTOP3Q7RTS5 596 aa17.38■□□□□ 0.37
PALB2-205ENST00000567003 ZNF410Q86VK4 478 aa17.38■□□□□ 0.37
PALB2-205ENST00000567003 ADSSL1Q8N142 457 aa17.38■□□□□ 0.37
PALB2-205ENST00000567003 SIX5Q8N196 739 aa17.38■□□□□ 0.37
PALB2-205ENST00000567003 ZNF579Q8NAF0 562 aaKnown RBP17.38■□□□□ 0.37
PALB2-205ENST00000567003 RSAD2Q8WXG1 361 aa17.38■□□□□ 0.37
PALB2-205ENST00000567003 RNF26Q9BY78 433 aaPredicted RBP17.38■□□□□ 0.37
PALB2-205ENST00000567003 KCNK12Q9HB15 430 aa17.38■□□□□ 0.37
PALB2-205ENST00000567003 FBXL21Q9UKT6 434 aa17.38■□□□□ 0.37
PALB2-205ENST00000567003 DUSP12Q9UNI6 340 aa17.38■□□□□ 0.37
PALB2-205ENST00000567003 SNX14Q9Y5W7 946 aa17.38■□□□□ 0.37
PALB2-205ENST00000567003 EML1O00423 815 aa17.37■□□□□ 0.37
PALB2-205ENST00000567003 LILRB3O75022 631 aa17.37■□□□□ 0.37
PALB2-205ENST00000567003 ZNF623O75123 536 aa17.37■□□□□ 0.37
PALB2-205ENST00000567003 CDC45O75419 566 aa17.37■□□□□ 0.37
PALB2-205ENST00000567003 POMCP01189 267 aa17.37■□□□□ 0.37
PALB2-205ENST00000567003 SKIP12755 728 aa17.37■□□□□ 0.37
PALB2-205ENST00000567003 AOC1P19801 751 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms