RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 MTUS1Q9ULD2 1270 aa14.89□□□□□ -0.03
CLK3-218ENST00000566926 TRANK1O15050 2925 aa14.89□□□□□ -0.03
CLK3-218ENST00000566926 RFXAPO00287 272 aa14.88□□□□□ -0.03
CLK3-218ENST00000566926 USO1O60763 962 aaKnown RBP14.88□□□□□ -0.03
CLK3-218ENST00000566926 CUTAO60888 179 aa14.88□□□□□ -0.03
CLK3-218ENST00000566926 EOMESO95936 686 aa14.88□□□□□ -0.03
CLK3-218ENST00000566926 IBSPP21815 317 aaPredicted RBP14.88□□□□□ -0.03
CLK3-218ENST00000566926 GRB10Q13322 594 aa14.88□□□□□ -0.03
CLK3-218ENST00000566926 EPC2Q52LR7 807 aa14.88□□□□□ -0.03
CLK3-218ENST00000566926 RSPH1Q8WYR4 309 aa14.88□□□□□ -0.03
CLK3-218ENST00000566926 CLP1Q92989 425 aaKnown RBP14.88□□□□□ -0.03
CLK3-218ENST00000566926 C17orf80Q9BSJ5 609 aa14.88□□□□□ -0.03
CLK3-218ENST00000566926 TRAIPQ9BWF2 469 aa14.88□□□□□ -0.03
CLK3-218ENST00000566926 IFT122Q9HBG6 1241 aa14.88□□□□□ -0.03
CLK3-218ENST00000566926 XPNPEP1Q9NQW7 623 aa14.88□□□□□ -0.03
CLK3-218ENST00000566926 KIAA1024Q9UPX6 916 aa14.88□□□□□ -0.03
CLK3-218ENST00000566926 DNM3Q9UQ16 869 aa14.88□□□□□ -0.03
CLK3-218ENST00000566926 MYH15Q9Y2K3 1946 aa14.88□□□□□ -0.03
CLK3-218ENST00000566926 A0A0U1RQF3 1178 aa14.87□□□□□ -0.03
CLK3-218ENST00000566926 EPOPA6NHQ4 379 aa14.87□□□□□ -0.03
CLK3-218ENST00000566926 RBAK-RBAKDNI3L0D1 243 aa14.87□□□□□ -0.03
CLK3-218ENST00000566926 CSDE1O75534 798 aaKnown RBP14.87□□□□□ -0.03
CLK3-218ENST00000566926 ERLIN2O94905 339 aa14.87□□□□□ -0.03
CLK3-218ENST00000566926 FGFR4P22455 802 aa14.87□□□□□ -0.03
CLK3-218ENST00000566926 CMA1P23946 247 aa14.87□□□□□ -0.03
CLK3-218ENST00000566926 AXLP30530 894 aa14.87□□□□□ -0.03
CLK3-218ENST00000566926 CTNNB1P35222 781 aa14.87□□□□□ -0.03
CLK3-218ENST00000566926 ARL2P36404 184 aa14.87□□□□□ -0.03
CLK3-218ENST00000566926 BMPR1AP36894 532 aa14.87□□□□□ -0.03
CLK3-218ENST00000566926 PTPROQ16827 1216 aa14.87□□□□□ -0.03
CLK3-218ENST00000566926 NAALADL2Q58DX5 795 aa14.87□□□□□ -0.03
CLK3-218ENST00000566926 TWF2Q6IBS0 349 aaKnown RBP14.87□□□□□ -0.03
CLK3-218ENST00000566926 CCDC73Q6ZRK6 1079 aa14.87□□□□□ -0.03
CLK3-218ENST00000566926 ECHDC2Q86YB7 292 aa14.87□□□□□ -0.03
CLK3-218ENST00000566926 IFNLR1Q8IU57 520 aaPredicted RBP14.87□□□□□ -0.03
CLK3-218ENST00000566926 ABI1Q8IZP0 508 aa14.87□□□□□ -0.03
CLK3-218ENST00000566926 GPT2Q8TD30 523 aa14.87□□□□□ -0.03
CLK3-218ENST00000566926 GDPD5Q8WTR4 605 aa14.87□□□□□ -0.03
CLK3-218ENST00000566926 MRPS27Q92552 414 aaKnown RBP14.87□□□□□ -0.03
CLK3-218ENST00000566926 AK8Q96MA6 479 aa14.87□□□□□ -0.03
CLK3-218ENST00000566926 PLVAPQ9BX97 442 aa14.87□□□□□ -0.03
CLK3-218ENST00000566926 NT5C3AQ9H0P0 336 aa14.87□□□□□ -0.03
CLK3-218ENST00000566926 AAASQ9NRG9 546 aa14.87□□□□□ -0.03
CLK3-218ENST00000566926 DDX19AQ9NUU7 478 aaKnown RBP14.87□□□□□ -0.03
CLK3-218ENST00000566926 PCDHA7Q9UN72 937 aa14.87□□□□□ -0.03
CLK3-218ENST00000566926 PIN4Q9Y237 131 aaKnown RBP14.87□□□□□ -0.03
CLK3-218ENST00000566926 SRPRBQ9Y5M8 271 aaKnown RBP14.87□□□□□ -0.03
CLK3-218ENST00000566926 MTCH2Q9Y6C9 303 aa14.87□□□□□ -0.03
CLK3-218ENST00000566926 VWA3AA6NCI4 1184 aa14.86□□□□□ -0.03
CLK3-218ENST00000566926 C5orf67F2Z3F1 127 aa14.86□□□□□ -0.03
CLK3-218ENST00000566926 H3BNC9 293 aa14.86□□□□□ -0.03
CLK3-218ENST00000566926 SLC26A4O43511 780 aa14.86□□□□□ -0.03
CLK3-218ENST00000566926 GADD45BO75293 160 aaPredicted RBP14.86□□□□□ -0.03
CLK3-218ENST00000566926 LETM1O95202 739 aaPredicted RBP14.86□□□□□ -0.03
CLK3-218ENST00000566926 CYP11B2P19099 503 aa14.86□□□□□ -0.03
CLK3-218ENST00000566926 RAB27AP51159 221 aa14.86□□□□□ -0.03
CLK3-218ENST00000566926 PTENP60484 403 aa14.86□□□□□ -0.03
CLK3-218ENST00000566926 GPM6BQ13491 265 aa14.86□□□□□ -0.03
CLK3-218ENST00000566926 PADI6Q6TGC4 694 aa14.86□□□□□ -0.03
CLK3-218ENST00000566926 SPRED2Q7Z698 418 aa14.86□□□□□ -0.03
CLK3-218ENST00000566926 PPM1EQ8WY54 764 aa14.86□□□□□ -0.03
CLK3-218ENST00000566926 PYM1Q9BRP8 204 aaKnown RBP14.86□□□□□ -0.03
CLK3-218ENST00000566926 C11orf84Q9BUA3 381 aaPredicted RBP14.86□□□□□ -0.03
CLK3-218ENST00000566926 NFKBIZQ9BYH8 718 aa14.86□□□□□ -0.03
CLK3-218ENST00000566926 TMEM117Q9H0C3 514 aa14.86□□□□□ -0.03
CLK3-218ENST00000566926 POLR3FQ9H1D9 316 aaPredicted RBP14.86□□□□□ -0.03
CLK3-218ENST00000566926 AGPAT5Q9NUQ2 364 aa14.86□□□□□ -0.03
CLK3-218ENST00000566926 MYO7AQ13402 2215 aa14.86□□□□□ -0.03
CLK3-218ENST00000566926 A0A087WWV3 80 aa14.85□□□□□ -0.03
CLK3-218ENST00000566926 FAM237AA0A1B0GTK4 181 aa14.85□□□□□ -0.03
CLK3-218ENST00000566926 TBKBP1A7MCY6 615 aa14.85□□□□□ -0.03
CLK3-218ENST00000566926 LPXNO60711 386 aa14.85□□□□□ -0.03
CLK3-218ENST00000566926 EYA4O95677 639 aa14.85□□□□□ -0.03
CLK3-218ENST00000566926 FAM160A1Q05DH4 1040 aa14.85□□□□□ -0.03
CLK3-218ENST00000566926 CAPSQ13938 189 aa14.85□□□□□ -0.03
CLK3-218ENST00000566926 PPP2R5AQ15172 486 aa14.85□□□□□ -0.03
CLK3-218ENST00000566926 CCDC85BQ15834 202 aaPredicted RBP14.85□□□□□ -0.03
CLK3-218ENST00000566926 IL17AQ16552 155 aa14.85□□□□□ -0.03
CLK3-218ENST00000566926 PAN2Q504Q3 1202 aaKnown RBP14.85□□□□□ -0.03
CLK3-218ENST00000566926 AXDND1Q5T1B0 1012 aaPredicted RBP14.85□□□□□ -0.03
CLK3-218ENST00000566926 SPOUT1Q5T280 376 aaKnown RBP14.85□□□□□ -0.03
CLK3-218ENST00000566926 FAM102BQ5T8I3 360 aa14.85□□□□□ -0.03
CLK3-218ENST00000566926 ZBTB8OSQ8IWT0 167 aa14.85□□□□□ -0.03
CLK3-218ENST00000566926 MICALL1Q8N3F8 863 aa14.85□□□□□ -0.03
CLK3-218ENST00000566926 P2RX5Q93086 422 aa14.85□□□□□ -0.03
CLK3-218ENST00000566926 PGBD4Q96DM1 585 aa14.85□□□□□ -0.03
CLK3-218ENST00000566926 CDK5RAP3Q96JB5 506 aa14.85□□□□□ -0.03
CLK3-218ENST00000566926 LMAN2LQ9H0V9 348 aa14.85□□□□□ -0.03
CLK3-218ENST00000566926 BHMT2Q9H2M3 363 aa14.85□□□□□ -0.03
CLK3-218ENST00000566926 FAM13BQ9NYF5 915 aa14.85□□□□□ -0.03
CLK3-218ENST00000566926 FBXO2Q9UK22 296 aaPredicted RBP14.85□□□□□ -0.03
CLK3-218ENST00000566926 CARNS1A5YM72 827 aa14.84□□□□□ -0.03
CLK3-218ENST00000566926 INO80B-WBP1J3KQ70 363 aa14.84□□□□□ -0.03
CLK3-218ENST00000566926 ZNF623O75123 536 aa14.84□□□□□ -0.03
CLK3-218ENST00000566926 GLRA2P23416 452 aa14.84□□□□□ -0.03
CLK3-218ENST00000566926 MARCKSP29966 332 aaPredicted RBP14.84□□□□□ -0.03
CLK3-218ENST00000566926 ECM1Q16610 540 aa14.84□□□□□ -0.03
CLK3-218ENST00000566926 HYIQ5T013 277 aa14.84□□□□□ -0.03
CLK3-218ENST00000566926 CCDC183Q5T5S1 534 aa14.84□□□□□ -0.03
CLK3-218ENST00000566926 MAEAQ7L5Y9 396 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms