RNA–Protein interactions for RNA: ENST00000566808.2

CDH3-205, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-205ENST00000566808 MRPL17Q9NRX2 175 aaKnown RBP19.03■□□□□ 0.64
CDH3-205ENST00000566808 DNAJB4Q9UDY4 337 aa19.03■□□□□ 0.64
CDH3-205ENST00000566808 TCEAL9Q9UHQ7 104 aa19.03■□□□□ 0.64
CDH3-205ENST00000566808 FGFR4P22455 802 aa19.02■□□□□ 0.64
CDH3-205ENST00000566808 NAPAP54920 295 aa19.02■□□□□ 0.64
CDH3-205ENST00000566808 B4GALNT3Q6L9W6 998 aa19.02■□□□□ 0.64
CDH3-205ENST00000566808 NFXL1Q6ZNB6 911 aa19.02■□□□□ 0.64
CDH3-205ENST00000566808 TMTC3Q6ZXV5 915 aa19.02■□□□□ 0.64
CDH3-205ENST00000566808 TRMT1LQ7Z2T5 733 aaKnown RBP19.02■□□□□ 0.64
CDH3-205ENST00000566808 NLRP7Q8WX94 980 aa19.02■□□□□ 0.64
CDH3-205ENST00000566808 ZNF668Q96K58 619 aaPredicted RBP19.02■□□□□ 0.64
CDH3-205ENST00000566808 RTKNQ9BST9 563 aa19.02■□□□□ 0.64
CDH3-205ENST00000566808 FOXQ1Q9C009 403 aa19.02■□□□□ 0.64
CDH3-205ENST00000566808 FBXO4Q9UKT5 387 aa19.02■□□□□ 0.64
CDH3-205ENST00000566808 INPP5FQ9Y2H2 1132 aa19.02■□□□□ 0.64
CDH3-205ENST00000566808 PCDHGA2Q9Y5H1 932 aa19.02■□□□□ 0.64
CDH3-205ENST00000566808 CCDC195A0A1B0GUA6 201 aa19.01■□□□□ 0.63
CDH3-205ENST00000566808 CCDC69A6NI79 296 aa19.01■□□□□ 0.63
CDH3-205ENST00000566808 INPPL1O15357 1258 aa19.01■□□□□ 0.63
CDH3-205ENST00000566808 LILRB3O75022 631 aa19.01■□□□□ 0.63
CDH3-205ENST00000566808 SSBP05455 408 aaKnown RBP eCLIP19.01■□□□□ 0.63
CDH3-205ENST00000566808 ADH1AP07327 375 aa19.01■□□□□ 0.63
CDH3-205ENST00000566808 PSAPP07602 524 aa19.01■□□□□ 0.63
CDH3-205ENST00000566808 RXRAP19793 462 aa19.01■□□□□ 0.63
CDH3-205ENST00000566808 ADCY7P51828 1080 aa19.01■□□□□ 0.63
CDH3-205ENST00000566808 PTH1RQ03431 593 aa19.01■□□□□ 0.63
CDH3-205ENST00000566808 HTR4Q13639 388 aa19.01■□□□□ 0.63
CDH3-205ENST00000566808 WWC2Q6AWC2 1192 aa19.01■□□□□ 0.63
CDH3-205ENST00000566808 TWF2Q6IBS0 349 aaKnown RBP19.01■□□□□ 0.63
CDH3-205ENST00000566808 PLA2G4DQ86XP0 818 aa19.01■□□□□ 0.63
CDH3-205ENST00000566808 TMTC2Q8N394 836 aa19.01■□□□□ 0.63
CDH3-205ENST00000566808 LPPQ93052 612 aa19.01■□□□□ 0.63
CDH3-205ENST00000566808 SHDQ96IW2 340 aa19.01■□□□□ 0.63
CDH3-205ENST00000566808 GBP3Q9H0R5 595 aa19.01■□□□□ 0.63
CDH3-205ENST00000566808 CNOT1A5YKK6 2376 aaKnown RBP19.01■□□□□ 0.63
CDH3-205ENST00000566808 IGLV3-22A0A075B6J6 115 aa19■□□□□ 0.63
CDH3-205ENST00000566808 ANHXE9PGG2 379 aa19■□□□□ 0.63
CDH3-205ENST00000566808 FAM86B1E9PN63 330 aa19■□□□□ 0.63
CDH3-205ENST00000566808 GLUD1P00367 558 aa19■□□□□ 0.63
CDH3-205ENST00000566808 URODP06132 367 aa19■□□□□ 0.63
CDH3-205ENST00000566808 ADRB1P08588 477 aa19■□□□□ 0.63
CDH3-205ENST00000566808 FAM86B2P0C5J1 330 aa19■□□□□ 0.63
CDH3-205ENST00000566808 RAB27AP51159 221 aa19■□□□□ 0.63
CDH3-205ENST00000566808 STARD6P59095 220 aa19■□□□□ 0.63
CDH3-205ENST00000566808 SETQ01105 290 aaPredicted RBP19■□□□□ 0.63
CDH3-205ENST00000566808 NUCB1Q02818 461 aa19■□□□□ 0.63
CDH3-205ENST00000566808 CCDC82Q8N4S0 544 aa19■□□□□ 0.63
CDH3-205ENST00000566808 SMG7Q92540 1137 aaKnown RBP19■□□□□ 0.63
CDH3-205ENST00000566808 TBC1D22BQ9NU19 505 aa19■□□□□ 0.63
CDH3-205ENST00000566808 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19■□□□□ 0.63
CDH3-205ENST00000566808 GABBR1Q9UBS5 961 aa19■□□□□ 0.63
CDH3-205ENST00000566808 SMG5Q9UPR3 1016 aaKnown RBP19■□□□□ 0.63
CDH3-205ENST00000566808 PCDHA10Q9Y5I2 948 aa19■□□□□ 0.63
CDH3-205ENST00000566808 ANKRD11Q6UB99 2663 aaPredicted RBP18.99■□□□□ 0.63
CDH3-205ENST00000566808 SH2B2O14492 632 aaPredicted RBP18.99■□□□□ 0.63
CDH3-205ENST00000566808 LAMTOR5O43504 91 aa18.99■□□□□ 0.63
CDH3-205ENST00000566808 PRC1O43663 620 aa18.99■□□□□ 0.63
CDH3-205ENST00000566808 B4GALT3O60512 393 aa18.99■□□□□ 0.63
CDH3-205ENST00000566808 PAPLNO95428 1278 aa18.99■□□□□ 0.63
CDH3-205ENST00000566808 OATP04181 439 aa18.99■□□□□ 0.63
CDH3-205ENST00000566808 SFPQP23246 707 aaKnown RBP eCLIP18.99■□□□□ 0.63
CDH3-205ENST00000566808 TYW1BQ6NUM6 668 aa18.99■□□□□ 0.63
CDH3-205ENST00000566808 URGCPQ8TCY9 931 aa18.99■□□□□ 0.63
CDH3-205ENST00000566808 RUFY2Q8WXA3 655 aa18.99■□□□□ 0.63
CDH3-205ENST00000566808 TMEM87BQ96K49 555 aa18.99■□□□□ 0.63
CDH3-205ENST00000566808 ZNF577Q9BSK1 485 aa18.99■□□□□ 0.63
CDH3-205ENST00000566808 BCO2Q9BYV7 579 aa18.99■□□□□ 0.63
CDH3-205ENST00000566808 GCOM2Q9BZD3 368 aaPredicted RBP18.99■□□□□ 0.63
CDH3-205ENST00000566808 EPC1Q9H2F5 836 aa18.99■□□□□ 0.63
CDH3-205ENST00000566808 FAM105AQ9NUU6 356 aa18.99■□□□□ 0.63
CDH3-205ENST00000566808 SPATA6Q9NWH7 488 aaPredicted RBP18.99■□□□□ 0.63
CDH3-205ENST00000566808 SSX2IPQ9Y2D8 614 aa18.99■□□□□ 0.63
CDH3-205ENST00000566808 CNTNAP5Q8WYK1 1306 aa18.99■□□□□ 0.63
CDH3-205ENST00000566808 MEIS3P2A8K0S8 358 aa18.98■□□□□ 0.63
CDH3-205ENST00000566808 OFD1O75665 1012 aa18.98■□□□□ 0.63
CDH3-205ENST00000566808 SOD2P04179 222 aa18.98■□□□□ 0.63
CDH3-205ENST00000566808 LAMP2P13473 410 aa18.98■□□□□ 0.63
CDH3-205ENST00000566808 LIFRP42702 1097 aa18.98■□□□□ 0.63
CDH3-205ENST00000566808 AK2P54819 239 aa18.98■□□□□ 0.63
CDH3-205ENST00000566808 LONRF3Q496Y0 759 aa18.98■□□□□ 0.63
CDH3-205ENST00000566808 GET4Q7L5D6 327 aaPredicted RBP18.98■□□□□ 0.63
CDH3-205ENST00000566808 ATRIPQ8WXE1 791 aa18.98■□□□□ 0.63
CDH3-205ENST00000566808 RPS6KC1Q96S38 1066 aa18.98■□□□□ 0.63
CDH3-205ENST00000566808 TMEM175Q9BSA9 504 aa18.98■□□□□ 0.63
CDH3-205ENST00000566808 HERC2P3Q9BVR0 1158 aa18.98■□□□□ 0.63
CDH3-205ENST00000566808 GLT8D2Q9H1C3 349 aa18.98■□□□□ 0.63
CDH3-205ENST00000566808 PIN4Q9Y237 131 aaKnown RBP18.98■□□□□ 0.63
CDH3-205ENST00000566808 NUMBLQ9Y6R0 609 aa18.98■□□□□ 0.63
CDH3-205ENST00000566808 hCG_1984214I3L0E3 225 aa18.97■□□□□ 0.63
CDH3-205ENST00000566808 C2CD2LO14523 706 aa18.97■□□□□ 0.63
CDH3-205ENST00000566808 TEX28O15482 410 aa18.97■□□□□ 0.63
CDH3-205ENST00000566808 ZNF623O75123 536 aa18.97■□□□□ 0.63
CDH3-205ENST00000566808 LRRN2O75325 713 aa18.97■□□□□ 0.63
CDH3-205ENST00000566808 CSDE1O75534 798 aaKnown RBP18.97■□□□□ 0.63
CDH3-205ENST00000566808 RFPL2O75678 378 aa18.97■□□□□ 0.63
CDH3-205ENST00000566808 MCM5P33992 734 aa18.97■□□□□ 0.63
CDH3-205ENST00000566808 MAGEA9P43362 315 aa18.97■□□□□ 0.63
CDH3-205ENST00000566808 CLK2P49760 499 aaKnown RBP18.97■□□□□ 0.63
CDH3-205ENST00000566808 CDC42EP1Q00587 391 aa18.97■□□□□ 0.63
CDH3-205ENST00000566808 PRKCEQ02156 737 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms