RNA–Protein interactions for RNA: ENST00000566482.5

CNEP1R1-208, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CNEP1R1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-208ENST00000566482 NFKBIZQ9BYH8 718 aa14.28□□□□□ -0.12
CNEP1R1-208ENST00000566482 POLD4Q9HCU8 107 aa14.28□□□□□ -0.12
CNEP1R1-208ENST00000566482 FBXO2Q9UK22 296 aaPredicted RBP14.28□□□□□ -0.12
CNEP1R1-208ENST00000566482 MRPL42Q9Y6G3 142 aaKnown RBP14.28□□□□□ -0.12
CNEP1R1-208ENST00000566482 MYH15Q9Y2K3 1946 aa14.27□□□□□ -0.12
CNEP1R1-208ENST00000566482 TRANK1O15050 2925 aa14.27□□□□□ -0.12
CNEP1R1-208ENST00000566482 TBKBP1A7MCY6 615 aa14.27□□□□□ -0.13
CNEP1R1-208ENST00000566482 LPXNO60711 386 aa14.27□□□□□ -0.13
CNEP1R1-208ENST00000566482 ERLIN2O94905 339 aa14.27□□□□□ -0.13
CNEP1R1-208ENST00000566482 F13A1P00488 732 aa14.27□□□□□ -0.13
CNEP1R1-208ENST00000566482 HOXA11P31270 313 aaPredicted RBP14.27□□□□□ -0.13
CNEP1R1-208ENST00000566482 CTNNB1P35222 781 aa14.27□□□□□ -0.13
CNEP1R1-208ENST00000566482 NASPP49321 788 aaPredicted RBP14.27□□□□□ -0.13
CNEP1R1-208ENST00000566482 PKP1Q13835 747 aa14.27□□□□□ -0.13
CNEP1R1-208ENST00000566482 SPECC1Q5M775 1068 aa14.27□□□□□ -0.13
CNEP1R1-208ENST00000566482 ZNF598Q86UK7 904 aaKnown RBP14.27□□□□□ -0.13
CNEP1R1-208ENST00000566482 KCTD17Q8N5Z5 321 aa14.27□□□□□ -0.13
CNEP1R1-208ENST00000566482 KIFAP3Q92845 792 aa14.27□□□□□ -0.13
CNEP1R1-208ENST00000566482 CLP1Q92989 425 aaKnown RBP14.27□□□□□ -0.13
CNEP1R1-208ENST00000566482 CALML4Q96GE6 196 aa14.27□□□□□ -0.13
CNEP1R1-208ENST00000566482 CLIC6Q96NY7 704 aa14.27□□□□□ -0.13
CNEP1R1-208ENST00000566482 TRAIPQ9BWF2 469 aa14.27□□□□□ -0.13
CNEP1R1-208ENST00000566482 CSRNP2Q9H175 543 aa14.27□□□□□ -0.13
CNEP1R1-208ENST00000566482 SRPRBQ9Y5M8 271 aaKnown RBP14.27□□□□□ -0.13
CNEP1R1-208ENST00000566482 MORC2Q9Y6X9 1032 aaPredicted RBP14.27□□□□□ -0.13
CNEP1R1-208ENST00000566482 RALGAPA2Q2PPJ7 1873 aa14.27□□□□□ -0.13
CNEP1R1-208ENST00000566482 NLRC5Q86WI3 1866 aa14.27□□□□□ -0.13
CNEP1R1-208ENST00000566482 MYO9BQ13459 2157 aa14.26□□□□□ -0.13
CNEP1R1-208ENST00000566482 HOXA2O43364 376 aa14.26□□□□□ -0.13
CNEP1R1-208ENST00000566482 TSPAN1O60635 241 aa14.26□□□□□ -0.13
CNEP1R1-208ENST00000566482 HIP1RO75146 1068 aa14.26□□□□□ -0.13
CNEP1R1-208ENST00000566482 EOMESO95936 686 aa14.26□□□□□ -0.13
CNEP1R1-208ENST00000566482 SSBP05455 408 aaKnown RBP eCLIP14.26□□□□□ -0.13
CNEP1R1-208ENST00000566482 PLA2G4BP0C869 781 aa14.26□□□□□ -0.13
CNEP1R1-208ENST00000566482 PLCG1P19174 1290 aa14.26□□□□□ -0.13
CNEP1R1-208ENST00000566482 BMPR1AP36894 532 aa14.26□□□□□ -0.13
CNEP1R1-208ENST00000566482 NAMPTP43490 491 aa14.26□□□□□ -0.13
CNEP1R1-208ENST00000566482 SLC39A14Q15043 492 aa14.26□□□□□ -0.13
CNEP1R1-208ENST00000566482 KARSQ15046 597 aaKnown RBP14.26□□□□□ -0.13
CNEP1R1-208ENST00000566482 PPP2R5AQ15172 486 aa14.26□□□□□ -0.13
CNEP1R1-208ENST00000566482 PCBP1Q15365 356 aaKnown RBP eCLIP14.26□□□□□ -0.13
CNEP1R1-208ENST00000566482 AMHR2Q16671 573 aa14.26□□□□□ -0.13
CNEP1R1-208ENST00000566482 CLLU1OSQ5K130 101 aa14.26□□□□□ -0.13
CNEP1R1-208ENST00000566482 CDCA2Q69YH5 1023 aaPredicted RBP14.26□□□□□ -0.13
CNEP1R1-208ENST00000566482 RINT1Q6NUQ1 792 aa14.26□□□□□ -0.13
CNEP1R1-208ENST00000566482 C1orf186Q6ZWK4 172 aa14.26□□□□□ -0.13
CNEP1R1-208ENST00000566482 USP49Q70CQ1 688 aa14.26□□□□□ -0.13
CNEP1R1-208ENST00000566482 ZBTB8OSQ8IWT0 167 aa14.26□□□□□ -0.13
CNEP1R1-208ENST00000566482 SYT2Q8N9I0 419 aaPredicted RBP14.26□□□□□ -0.13
CNEP1R1-208ENST00000566482 LRRC15Q8TF66 581 aa14.26□□□□□ -0.13
CNEP1R1-208ENST00000566482 CPB2Q96IY4 423 aa14.26□□□□□ -0.13
CNEP1R1-208ENST00000566482 IFT74Q96LB3 600 aa14.26□□□□□ -0.13
CNEP1R1-208ENST00000566482 ZNF396Q96N95 335 aaPredicted RBP14.26□□□□□ -0.13
CNEP1R1-208ENST00000566482 CASD1Q96PB1 797 aa14.26□□□□□ -0.13
CNEP1R1-208ENST00000566482 TMEM117Q9H0C3 514 aa14.26□□□□□ -0.13
CNEP1R1-208ENST00000566482 FAM105AQ9NUU6 356 aa14.26□□□□□ -0.13
CNEP1R1-208ENST00000566482 TFIP11Q9UBB9 837 aaKnown RBP14.26□□□□□ -0.13
CNEP1R1-208ENST00000566482 MTCH2Q9Y6C9 303 aa14.26□□□□□ -0.13
CNEP1R1-208ENST00000566482 FNDC1Q4ZHG4 1894 aaPredicted RBP14.26□□□□□ -0.13
CNEP1R1-208ENST00000566482 EYSQ5T1H1 3165 aa14.26□□□□□ -0.13
CNEP1R1-208ENST00000566482 KIAA1671Q9BY89 1806 aa14.25□□□□□ -0.13
CNEP1R1-208ENST00000566482 C5orf67F2Z3F1 127 aa14.25□□□□□ -0.13
CNEP1R1-208ENST00000566482 B4GALT5O43286 388 aa14.25□□□□□ -0.13
CNEP1R1-208ENST00000566482 GTPBP6O43824 516 aaPredicted RBP14.25□□□□□ -0.13
CNEP1R1-208ENST00000566482 SKIP12755 728 aa14.25□□□□□ -0.13
CNEP1R1-208ENST00000566482 POU3F3P20264 500 aaPredicted RBP14.25□□□□□ -0.13
CNEP1R1-208ENST00000566482 GUCY2CP25092 1073 aa14.25□□□□□ -0.13
CNEP1R1-208ENST00000566482 AXLP30530 894 aa14.25□□□□□ -0.13
CNEP1R1-208ENST00000566482 RAB27AP51159 221 aa14.25□□□□□ -0.13
CNEP1R1-208ENST00000566482 SLC12A3P55017 1021 aa14.25□□□□□ -0.13
CNEP1R1-208ENST00000566482 MAPK7Q13164 816 aa14.25□□□□□ -0.13
CNEP1R1-208ENST00000566482 STK38Q15208 465 aa14.25□□□□□ -0.13
CNEP1R1-208ENST00000566482 FOXD4L6Q3SYB3 417 aaPredicted RBP14.25□□□□□ -0.13
CNEP1R1-208ENST00000566482 LONRF3Q496Y0 759 aa14.25□□□□□ -0.13
CNEP1R1-208ENST00000566482 UBXN11Q5T124 520 aa14.25□□□□□ -0.13
CNEP1R1-208ENST00000566482 NOTUMQ6P988 496 aa14.25□□□□□ -0.13
CNEP1R1-208ENST00000566482 FOXD4L3Q6VB84 417 aaPredicted RBP14.25□□□□□ -0.13
CNEP1R1-208ENST00000566482 DAW1Q8N136 415 aa14.25□□□□□ -0.13
CNEP1R1-208ENST00000566482 MICALL1Q8N3F8 863 aa14.25□□□□□ -0.13
CNEP1R1-208ENST00000566482 LINC00301Q8NCQ3 95 aa14.25□□□□□ -0.13
CNEP1R1-208ENST00000566482 RASSF8Q8NHQ8 419 aa14.25□□□□□ -0.13
CNEP1R1-208ENST00000566482 DEPTORQ8TB45 409 aa14.25□□□□□ -0.13
CNEP1R1-208ENST00000566482 LPPQ93052 612 aa14.25□□□□□ -0.13
CNEP1R1-208ENST00000566482 EPSTI1Q96J88 318 aa14.25□□□□□ -0.13
CNEP1R1-208ENST00000566482 KIFC3Q9BVG8 833 aa14.25□□□□□ -0.13
CNEP1R1-208ENST00000566482 CCSER1Q9C0I3 900 aa14.25□□□□□ -0.13
CNEP1R1-208ENST00000566482 C2orf40Q9H1Z8 148 aa14.25□□□□□ -0.13
CNEP1R1-208ENST00000566482 HCSTQ9UBK5 93 aa14.25□□□□□ -0.13
CNEP1R1-208ENST00000566482 RWDD3Q9Y3V2 267 aa14.25□□□□□ -0.13
CNEP1R1-208ENST00000566482 PCDHB2Q9Y5E7 798 aa14.25□□□□□ -0.13
CNEP1R1-208ENST00000566482 H3BNC9 293 aa14.24□□□□□ -0.13
CNEP1R1-208ENST00000566482 ZNF623O75123 536 aa14.24□□□□□ -0.13
CNEP1R1-208ENST00000566482 RB1P06400 928 aa14.24□□□□□ -0.13
CNEP1R1-208ENST00000566482 ARF4P18085 180 aaPredicted RBP14.24□□□□□ -0.13
CNEP1R1-208ENST00000566482 NCBP1Q09161 790 aaKnown RBP14.24□□□□□ -0.13
CNEP1R1-208ENST00000566482 RAD51AP2Q09MP3 1159 aa14.24□□□□□ -0.13
CNEP1R1-208ENST00000566482 GPM6BQ13491 265 aa14.24□□□□□ -0.13
CNEP1R1-208ENST00000566482 CCDC85BQ15834 202 aaPredicted RBP14.24□□□□□ -0.13
CNEP1R1-208ENST00000566482 ABI1Q8IZP0 508 aa14.24□□□□□ -0.13
CNEP1R1-208ENST00000566482 KRI1Q8N9T8 703 aaKnown RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms