RNA–Protein interactions for RNA: ENST00000566370.1

LINC00563-201, long intergenic non-protein coding RNA 563, humanhuman

BASIC

Gene LINC00563, Length 1,400 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00563-201ENST00000566370 DIS3Q9Y2L1 958 aaKnown RBP14.51□□□□□ -0.09
LINC00563-201ENST00000566370 CSADQ9Y600 493 aa14.51□□□□□ -0.09
LINC00563-201ENST00000566370 ZNF541Q9H0D2 1346 aa14.51□□□□□ -0.09
LINC00563-201ENST00000566370 IGSF9BQ9UPX0 1349 aa14.51□□□□□ -0.09
LINC00563-201ENST00000566370 TRIM49P0CI25 452 aa14.5□□□□□ -0.09
LINC00563-201ENST00000566370 TRIM49CP0CI26 452 aa14.5□□□□□ -0.09
LINC00563-201ENST00000566370 GTF2H1P32780 548 aa14.5□□□□□ -0.09
LINC00563-201ENST00000566370 COPB2P35606 906 aa14.5□□□□□ -0.09
LINC00563-201ENST00000566370 MFAP3P55082 362 aa14.5□□□□□ -0.09
LINC00563-201ENST00000566370 KIF22Q14807 665 aa14.5□□□□□ -0.09
LINC00563-201ENST00000566370 XKR3Q5GH77 459 aa14.5□□□□□ -0.09
LINC00563-201ENST00000566370 PEX26Q7Z412 305 aa14.5□□□□□ -0.09
LINC00563-201ENST00000566370 RDH13Q8NBN7 331 aa14.5□□□□□ -0.09
LINC00563-201ENST00000566370 FAM71BQ8TC56 605 aa14.5□□□□□ -0.09
LINC00563-201ENST00000566370 TMC2Q8TDI7 906 aa14.5□□□□□ -0.09
LINC00563-201ENST00000566370 CCDC102AQ96A19 550 aa14.5□□□□□ -0.09
LINC00563-201ENST00000566370 PCIF1Q9H4Z3 704 aa14.5□□□□□ -0.09
LINC00563-201ENST00000566370 PRDM10Q9NQV6 1147 aa14.5□□□□□ -0.09
LINC00563-201ENST00000566370 CYP39A1Q9NYL5 469 aa14.5□□□□□ -0.09
LINC00563-201ENST00000566370 TBX20Q9UMR3 447 aa14.5□□□□□ -0.09
LINC00563-201ENST00000566370 DICER1Q9UPY3 1922 aaKnown RBP14.5□□□□□ -0.09
LINC00563-201ENST00000566370 NCANO14594 1321 aa14.5□□□□□ -0.09
LINC00563-201ENST00000566370 TMCO5BA8MYB1 307 aa14.49□□□□□ -0.09
LINC00563-201ENST00000566370 SASH3O75995 380 aa14.49□□□□□ -0.09
LINC00563-201ENST00000566370 CLSTN1O94985 981 aa14.49□□□□□ -0.09
LINC00563-201ENST00000566370 FTCDO95954 541 aa14.49□□□□□ -0.09
LINC00563-201ENST00000566370 CCNE2O96020 404 aa14.49□□□□□ -0.09
LINC00563-201ENST00000566370 TNFRSF8P28908 595 aa14.49□□□□□ -0.09
LINC00563-201ENST00000566370 NF2P35240 595 aa14.49□□□□□ -0.09
LINC00563-201ENST00000566370 EPHB4P54760 987 aa14.49□□□□□ -0.09
LINC00563-201ENST00000566370 STRN3Q13033 797 aa14.49□□□□□ -0.09
LINC00563-201ENST00000566370 DGKZQ13574 1117 aa14.49□□□□□ -0.09
LINC00563-201ENST00000566370 UGCGQ16739 394 aa14.49□□□□□ -0.09
LINC00563-201ENST00000566370 ARHGAP44Q17R89 818 aa14.49□□□□□ -0.09
LINC00563-201ENST00000566370 RHOT2Q8IXI1 618 aa14.49□□□□□ -0.09
LINC00563-201ENST00000566370 ANKRD35Q8N283 1001 aa14.49□□□□□ -0.09
LINC00563-201ENST00000566370 COG1Q8WTW3 980 aa14.49□□□□□ -0.09
LINC00563-201ENST00000566370 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.49□□□□□ -0.09
LINC00563-201ENST00000566370 RFFLQ8WZ73 363 aa14.49□□□□□ -0.09
LINC00563-201ENST00000566370 DCPSQ96C86 337 aaKnown RBP14.49□□□□□ -0.09
LINC00563-201ENST00000566370 BICD1Q96G01 975 aa14.49□□□□□ -0.09
LINC00563-201ENST00000566370 NAP1L3Q99457 506 aaPredicted RBP14.49□□□□□ -0.09
LINC00563-201ENST00000566370 SEPT11Q9NVA2 429 aaKnown RBP14.49□□□□□ -0.09
LINC00563-201ENST00000566370 STIM2Q9P246 746 aa14.49□□□□□ -0.09
LINC00563-201ENST00000566370 SEPT9Q9UHD8 586 aaPredicted RBP14.49□□□□□ -0.09
LINC00563-201ENST00000566370 AMFRQ9UKV5 643 aa14.49□□□□□ -0.09
LINC00563-201ENST00000566370 MYH10P35580 1976 aa14.49□□□□□ -0.09
LINC00563-201ENST00000566370 ARID2Q68CP9 1835 aa14.49□□□□□ -0.09
LINC00563-201ENST00000566370 LOC285556D6RIA3 1793 aa14.49□□□□□ -0.09
LINC00563-201ENST00000566370 DENND3A2RUS2 1198 aa14.49□□□□□ -0.09
LINC00563-201ENST00000566370 SPATA31C2B4DYI2 1134 aa14.49□□□□□ -0.09
LINC00563-201ENST00000566370 CCDC188H7C350 402 aa14.49□□□□□ -0.09
LINC00563-201ENST00000566370 PDE2AO00408 941 aaPredicted RBP14.49□□□□□ -0.09
LINC00563-201ENST00000566370 NCK2O43639 380 aa14.49□□□□□ -0.09
LINC00563-201ENST00000566370 ATP9AO75110 1047 aa14.49□□□□□ -0.09
LINC00563-201ENST00000566370 KIF4AO95239 1232 aa14.49□□□□□ -0.09
LINC00563-201ENST00000566370 TFRCP02786 760 aaKnown RBP14.49□□□□□ -0.09
LINC00563-201ENST00000566370 KCNA2P16389 499 aa14.49□□□□□ -0.09
LINC00563-201ENST00000566370 GARTP22102 1010 aa14.49□□□□□ -0.09
LINC00563-201ENST00000566370 MATR3P43243 847 aaKnown RBP eCLIP14.49□□□□□ -0.09
LINC00563-201ENST00000566370 NPTX2P47972 431 aa14.49□□□□□ -0.09
LINC00563-201ENST00000566370 IREB2P48200 963 aaKnown RBP14.49□□□□□ -0.09
LINC00563-201ENST00000566370 PAK2Q13177 524 aa14.49□□□□□ -0.09
LINC00563-201ENST00000566370 TMEM132BQ14DG7 1078 aa14.49□□□□□ -0.09
LINC00563-201ENST00000566370 R3HDM1Q15032 1099 aaKnown RBP14.49□□□□□ -0.09
LINC00563-201ENST00000566370 PPP2R5EQ16537 467 aa14.49□□□□□ -0.09
LINC00563-201ENST00000566370 SNRNP35Q16560 246 aaKnown RBP14.49□□□□□ -0.09
LINC00563-201ENST00000566370 CBWD6Q4V339 395 aa14.49□□□□□ -0.09
LINC00563-201ENST00000566370 CBWD3Q5JTY5 395 aa14.49□□□□□ -0.09
LINC00563-201ENST00000566370 CBWD5Q5RIA9 395 aa14.49□□□□□ -0.09
LINC00563-201ENST00000566370 FAM160B1Q5W0V3 765 aa14.49□□□□□ -0.09
LINC00563-201ENST00000566370 KRT39Q6A163 491 aa14.49□□□□□ -0.09
LINC00563-201ENST00000566370 EMBQ6PCB8 327 aa14.49□□□□□ -0.09
LINC00563-201ENST00000566370 CCNI2Q6ZMN8 369 aaPredicted RBP14.49□□□□□ -0.09
LINC00563-201ENST00000566370 RUFY1Q96T51 708 aa14.49□□□□□ -0.09
LINC00563-201ENST00000566370 NTPCRQ9BSD7 190 aaKnown RBP14.49□□□□□ -0.09
LINC00563-201ENST00000566370 UBXN6Q9BZV1 441 aa14.49□□□□□ -0.09
LINC00563-201ENST00000566370 BCAS3Q9H6U6 928 aa14.49□□□□□ -0.09
LINC00563-201ENST00000566370 UBE2TQ9NPD8 197 aaPredicted RBP14.49□□□□□ -0.09
LINC00563-201ENST00000566370 A1CFQ9NQ94 594 aaKnown RBP14.49□□□□□ -0.09
LINC00563-201ENST00000566370 SUCLA2Q9P2R7 463 aaPredicted RBP14.49□□□□□ -0.09
LINC00563-201ENST00000566370 SALL4Q9UJQ4 1053 aa14.49□□□□□ -0.09
LINC00563-201ENST00000566370 USP20Q9Y2K6 914 aa14.49□□□□□ -0.09
LINC00563-201ENST00000566370 AFG3L2Q9Y4W6 797 aa14.49□□□□□ -0.09
LINC00563-201ENST00000566370 PPME1Q9Y570 386 aa14.49□□□□□ -0.09
LINC00563-201ENST00000566370 RIPK3Q9Y572 518 aa14.49□□□□□ -0.09
LINC00563-201ENST00000566370 ANKRD62A6NC57 917 aa14.48□□□□□ -0.09
LINC00563-201ENST00000566370 SPDYE16A6NNV3 312 aaPredicted RBP14.48□□□□□ -0.09
LINC00563-201ENST00000566370 PGRMC1O00264 195 aaKnown RBP14.48□□□□□ -0.09
LINC00563-201ENST00000566370 DDX3XO00571 662 aaKnown RBP eCLIP14.48□□□□□ -0.09
LINC00563-201ENST00000566370 KCNK3O14649 394 aa14.48□□□□□ -0.09
LINC00563-201ENST00000566370 POLR3GO15318 223 aaPredicted RBP14.48□□□□□ -0.09
LINC00563-201ENST00000566370 SUPT20HL2P0C7V6 817 aa14.48□□□□□ -0.09
LINC00563-201ENST00000566370 CXCR5P32302 372 aa14.48□□□□□ -0.09
LINC00563-201ENST00000566370 ICAM3P32942 547 aa14.48□□□□□ -0.09
LINC00563-201ENST00000566370 POLGP54098 1239 aaPredicted RBP14.48□□□□□ -0.09
LINC00563-201ENST00000566370 ACTR2P61160 394 aa14.48□□□□□ -0.09
LINC00563-201ENST00000566370 PRKCEQ02156 737 aa14.48□□□□□ -0.09
LINC00563-201ENST00000566370 NNTQ13423 1086 aa14.48□□□□□ -0.09
LINC00563-201ENST00000566370 EPC2Q52LR7 807 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms