RNA–Protein interactions for RNA: ENST00000566269.6

MSLN-206, Transcript of mesothelin, humanhuman

TSL 3

Gene MSLN, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-206ENST00000566269 SKIV2LQ15477 1246 aaKnown RBP19.58■□□□□ 0.72
MSLN-206ENST00000566269 LONRF3Q496Y0 759 aa19.58■□□□□ 0.72
MSLN-206ENST00000566269 PLIN2Q99541 437 aa19.58■□□□□ 0.72
MSLN-206ENST00000566269 TMEM117Q9H0C3 514 aa19.58■□□□□ 0.72
MSLN-206ENST00000566269 FAM105AQ9NUU6 356 aa19.58■□□□□ 0.72
MSLN-206ENST00000566269 CLIC4Q9Y696 253 aa19.58■□□□□ 0.72
MSLN-206ENST00000566269 TSPAN1O60635 241 aa19.57■□□□□ 0.72
MSLN-206ENST00000566269 CSPG5O95196 566 aa19.57■□□□□ 0.72
MSLN-206ENST00000566269 SSBP05455 408 aaKnown RBP eCLIP19.57■□□□□ 0.72
MSLN-206ENST00000566269 RB1P06400 928 aa19.57■□□□□ 0.72
MSLN-206ENST00000566269 ATF7P17544 494 aaPredicted RBP19.57■□□□□ 0.72
MSLN-206ENST00000566269 POU5F1BQ06416 359 aa19.57■□□□□ 0.72
MSLN-206ENST00000566269 PTPROQ16827 1216 aa19.57■□□□□ 0.72
MSLN-206ENST00000566269 KCNK18Q7Z418 384 aa19.57■□□□□ 0.72
MSLN-206ENST00000566269 ZNF598Q86UK7 904 aaKnown RBP19.57■□□□□ 0.72
MSLN-206ENST00000566269 CABP7Q86V35 215 aa19.57■□□□□ 0.72
MSLN-206ENST00000566269 IFNLR1Q8IU57 520 aaPredicted RBP19.57■□□□□ 0.72
MSLN-206ENST00000566269 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.57■□□□□ 0.72
MSLN-206ENST00000566269 ZBTB8OSQ8IWT0 167 aa19.57■□□□□ 0.72
MSLN-206ENST00000566269 RASSF8Q8NHQ8 419 aa19.57■□□□□ 0.72
MSLN-206ENST00000566269 HELQQ8TDG4 1101 aa19.57■□□□□ 0.72
MSLN-206ENST00000566269 BSNDQ8WZ55 320 aa19.57■□□□□ 0.72
MSLN-206ENST00000566269 LPPQ93052 612 aa19.57■□□□□ 0.72
MSLN-206ENST00000566269 AK8Q96MA6 479 aa19.57■□□□□ 0.72
MSLN-206ENST00000566269 NT5C3AQ9H0P0 336 aa19.57■□□□□ 0.72
MSLN-206ENST00000566269 ZSCAN16Q9H4T2 348 aaPredicted RBP19.57■□□□□ 0.72
MSLN-206ENST00000566269 POLD4Q9HCU8 107 aa19.57■□□□□ 0.72
MSLN-206ENST00000566269 RNF19AQ9NV58 838 aa19.57■□□□□ 0.72
MSLN-206ENST00000566269 LMCD1Q9NZU5 365 aa19.57■□□□□ 0.72
MSLN-206ENST00000566269 HCSTQ9UBK5 93 aa19.57■□□□□ 0.72
MSLN-206ENST00000566269 XIRP2A4UGR9 3374 aa19.56■□□□□ 0.72
MSLN-206ENST00000566269 C5orf67F2Z3F1 127 aa19.56■□□□□ 0.72
MSLN-206ENST00000566269 EOMESO95936 686 aa19.56■□□□□ 0.72
MSLN-206ENST00000566269 SKIP12755 728 aa19.56■□□□□ 0.72
MSLN-206ENST00000566269 HOXA11P31270 313 aaPredicted RBP19.56■□□□□ 0.72
MSLN-206ENST00000566269 UBA7P41226 1012 aa19.56■□□□□ 0.72
MSLN-206ENST00000566269 GRIN1Q05586 938 aa19.56■□□□□ 0.72
MSLN-206ENST00000566269 NCBP1Q09161 790 aaKnown RBP19.56■□□□□ 0.72
MSLN-206ENST00000566269 PCBP1Q15365 356 aaKnown RBP eCLIP19.56■□□□□ 0.72
MSLN-206ENST00000566269 CLLU1OSQ5K130 101 aa19.56■□□□□ 0.72
MSLN-206ENST00000566269 FOXD4L5Q5VV16 416 aaPredicted RBP19.56■□□□□ 0.72
MSLN-206ENST00000566269 LRRC43Q8N309 656 aa19.56■□□□□ 0.72
MSLN-206ENST00000566269 FOXD4L4Q8WXT5 416 aaPredicted RBP19.56■□□□□ 0.72
MSLN-206ENST00000566269 CPB2Q96IY4 423 aa19.56■□□□□ 0.72
MSLN-206ENST00000566269 CASD1Q96PB1 797 aa19.56■□□□□ 0.72
MSLN-206ENST00000566269 PNMA5Q96PV4 448 aa19.56■□□□□ 0.72
MSLN-206ENST00000566269 TRAIPQ9BWF2 469 aa19.56■□□□□ 0.72
MSLN-206ENST00000566269 PLVAPQ9BX97 442 aa19.56■□□□□ 0.72
MSLN-206ENST00000566269 NFKBIZQ9BYH8 718 aa19.56■□□□□ 0.72
MSLN-206ENST00000566269 PRDM6Q9NQX0 595 aa19.56■□□□□ 0.72
MSLN-206ENST00000566269 PCDHB2Q9Y5E7 798 aa19.56■□□□□ 0.72
MSLN-206ENST00000566269 MYO7AQ13402 2215 aa19.56■□□□□ 0.72
MSLN-206ENST00000566269 MARCKSP29966 332 aaPredicted RBP19.55■□□□□ 0.72
MSLN-206ENST00000566269 LONP1P36776 959 aaKnown RBP19.55■□□□□ 0.72
MSLN-206ENST00000566269 PPP2R5AQ15172 486 aa19.55■□□□□ 0.72
MSLN-206ENST00000566269 HYIQ5T013 277 aa19.55■□□□□ 0.72
MSLN-206ENST00000566269 CDCA2Q69YH5 1023 aaPredicted RBP19.55■□□□□ 0.72
MSLN-206ENST00000566269 NOTUMQ6P988 496 aa19.55■□□□□ 0.72
MSLN-206ENST00000566269 DEPTORQ8TB45 409 aa19.55■□□□□ 0.72
MSLN-206ENST00000566269 KIFAP3Q92845 792 aa19.55■□□□□ 0.72
MSLN-206ENST00000566269 MRPL38Q96DV4 380 aaKnown RBP19.55■□□□□ 0.72
MSLN-206ENST00000566269 CALML4Q96GE6 196 aa19.55■□□□□ 0.72
MSLN-206ENST00000566269 IFT74Q96LB3 600 aa19.55■□□□□ 0.72
MSLN-206ENST00000566269 RUSC1Q9BVN2 902 aa19.55■□□□□ 0.72
MSLN-206ENST00000566269 C2orf40Q9H1Z8 148 aa19.55■□□□□ 0.72
MSLN-206ENST00000566269 AAASQ9NRG9 546 aa19.55■□□□□ 0.72
MSLN-206ENST00000566269 TYW1Q9NV66 732 aaKnown RBP19.55■□□□□ 0.72
MSLN-206ENST00000566269 MYH15Q9Y2K3 1946 aa19.55■□□□□ 0.72
MSLN-206ENST00000566269 BRWD1Q9NSI6 2320 aa19.54■□□□□ 0.72
MSLN-206ENST00000566269 GRM6O15303 877 aa19.54■□□□□ 0.72
MSLN-206ENST00000566269 B4GALT5O43286 388 aa19.54■□□□□ 0.72
MSLN-206ENST00000566269 LIG1P18858 919 aa19.54■□□□□ 0.72
MSLN-206ENST00000566269 AXLP30530 894 aa19.54■□□□□ 0.72
MSLN-206ENST00000566269 NAMPTP43490 491 aa19.54■□□□□ 0.72
MSLN-206ENST00000566269 PTPAQ15257 358 aa19.54■□□□□ 0.72
MSLN-206ENST00000566269 AMHR2Q16671 573 aa19.54■□□□□ 0.72
MSLN-206ENST00000566269 TMEM132AQ24JP5 1023 aa19.54■□□□□ 0.72
MSLN-206ENST00000566269 TMEM119Q4V9L6 283 aa19.54■□□□□ 0.72
MSLN-206ENST00000566269 PGBD4Q96DM1 585 aa19.54■□□□□ 0.72
MSLN-206ENST00000566269 USP28Q96RU2 1077 aa19.54■□□□□ 0.72
MSLN-206ENST00000566269 KIFC3Q9BVG8 833 aa19.54■□□□□ 0.72
MSLN-206ENST00000566269 MRPL9Q9BYD2 267 aaKnown RBP19.54■□□□□ 0.72
MSLN-206ENST00000566269 ALG13Q9NP73 1137 aaKnown RBP19.54■□□□□ 0.72
MSLN-206ENST00000566269 INPP5FQ9Y2H2 1132 aa19.54■□□□□ 0.72
MSLN-206ENST00000566269 PCDHB12Q9Y5F1 795 aa19.54■□□□□ 0.72
MSLN-206ENST00000566269 VCANP13611 3396 aa19.54■□□□□ 0.72
MSLN-206ENST00000566269 MEIS3P2A8K0S8 358 aa19.53■□□□□ 0.72
MSLN-206ENST00000566269 HIP1RO75146 1068 aa19.53■□□□□ 0.72
MSLN-206ENST00000566269 ARF4P18085 180 aaPredicted RBP19.53■□□□□ 0.72
MSLN-206ENST00000566269 LAG3P18627 525 aa19.53■□□□□ 0.72
MSLN-206ENST00000566269 RAD51AP2Q09MP3 1159 aa19.53■□□□□ 0.72
MSLN-206ENST00000566269 TIGD5Q53EQ6 642 aa19.53■□□□□ 0.72
MSLN-206ENST00000566269 UBXN11Q5T124 520 aa19.53■□□□□ 0.72
MSLN-206ENST00000566269 RINT1Q6NUQ1 792 aa19.53■□□□□ 0.72
MSLN-206ENST00000566269 GLB1LQ6UWU2 654 aa19.53■□□□□ 0.72
MSLN-206ENST00000566269 KLHL23Q8NBE8 558 aa19.53■□□□□ 0.72
MSLN-206ENST00000566269 COLGALT1Q8NBJ5 622 aa19.53■□□□□ 0.72
MSLN-206ENST00000566269 P2RX5Q93086 422 aa19.53■□□□□ 0.72
MSLN-206ENST00000566269 CCDC51Q96ER9 411 aa19.53■□□□□ 0.72
MSLN-206ENST00000566269 EIF2AQ9BY44 585 aaKnown RBP19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms