RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 MRPL43Q8N983 215 aaKnown RBP16.95■□□□□ 0.3
CMTM3-212ENST00000566121 SUSD6Q92537 303 aa16.95■□□□□ 0.3
CMTM3-212ENST00000566121 CCDC51Q96ER9 411 aa16.95■□□□□ 0.3
CMTM3-212ENST00000566121 IGFLR1Q9H665 355 aa16.95■□□□□ 0.3
CMTM3-212ENST00000566121 UBN1Q9NPG3 1134 aa16.95■□□□□ 0.3
CMTM3-212ENST00000566121 FAM105AQ9NUU6 356 aa16.95■□□□□ 0.3
CMTM3-212ENST00000566121 KANSL3Q9P2N6 904 aa16.95■□□□□ 0.3
CMTM3-212ENST00000566121 CNTNAP2Q9UHC6 1331 aa16.95■□□□□ 0.3
CMTM3-212ENST00000566121 LINC01565O15544 149 aa16.94■□□□□ 0.3
CMTM3-212ENST00000566121 DCXO43602 365 aa16.94■□□□□ 0.3
CMTM3-212ENST00000566121 DGAT1O75907 488 aa16.94■□□□□ 0.3
CMTM3-212ENST00000566121 LARGE1O95461 756 aa16.94■□□□□ 0.3
CMTM3-212ENST00000566121 SRGAP2BP0DMP2 458 aa16.94■□□□□ 0.3
CMTM3-212ENST00000566121 MUTP22033 750 aa16.94■□□□□ 0.3
CMTM3-212ENST00000566121 HOXA11P31270 313 aaPredicted RBP16.94■□□□□ 0.3
CMTM3-212ENST00000566121 LAMTOR4Q0VGL1 99 aa16.94■□□□□ 0.3
CMTM3-212ENST00000566121 TRIM29Q14134 588 aa16.94■□□□□ 0.3
CMTM3-212ENST00000566121 BMS1Q14692 1282 aaKnown RBP16.94■□□□□ 0.3
CMTM3-212ENST00000566121 CALCRLQ16602 461 aa16.94■□□□□ 0.3
CMTM3-212ENST00000566121 PLA2G4FQ68DD2 849 aa16.94■□□□□ 0.3
CMTM3-212ENST00000566121 TWF2Q6IBS0 349 aaKnown RBP16.94■□□□□ 0.3
CMTM3-212ENST00000566121 GLB1LQ6UWU2 654 aa16.94■□□□□ 0.3
CMTM3-212ENST00000566121 CATSPER4Q7RTX7 472 aa16.94■□□□□ 0.3
CMTM3-212ENST00000566121 ZNF579Q8NAF0 562 aaKnown RBP16.94■□□□□ 0.3
CMTM3-212ENST00000566121 MICAL1Q8TDZ2 1067 aa16.94■□□□□ 0.3
CMTM3-212ENST00000566121 DYDC2Q96IM9 177 aa16.94■□□□□ 0.3
CMTM3-212ENST00000566121 ZSCAN31Q96LW9 406 aaPredicted RBP16.94■□□□□ 0.3
CMTM3-212ENST00000566121 EIF2AK1Q9BQI3 630 aaKnown RBP16.94■□□□□ 0.3
CMTM3-212ENST00000566121 FOXP1Q9H334 677 aaPredicted RBP16.94■□□□□ 0.3
CMTM3-212ENST00000566121 RGL1Q9NZL6 768 aa16.94■□□□□ 0.3
CMTM3-212ENST00000566121 PLXNA4Q9HCM2 1894 aa16.93■□□□□ 0.3
CMTM3-212ENST00000566121 LOC730098B7Z3J9 87 aa16.93■□□□□ 0.3
CMTM3-212ENST00000566121 NEMFO60524 1076 aa16.93■□□□□ 0.3
CMTM3-212ENST00000566121 OFD1O75665 1012 aa16.93■□□□□ 0.3
CMTM3-212ENST00000566121 FGFR4P22455 802 aa16.93■□□□□ 0.3
CMTM3-212ENST00000566121 SSTR3P32745 418 aaPredicted RBP16.93■□□□□ 0.3
CMTM3-212ENST00000566121 PTENP60484 403 aa16.93■□□□□ 0.3
CMTM3-212ENST00000566121 SAFBQ15424 915 aaKnown RBP eCLIP16.93■□□□□ 0.3
CMTM3-212ENST00000566121 HELQQ8TDG4 1101 aa16.93■□□□□ 0.3
CMTM3-212ENST00000566121 SH2D3AQ9BRG2 576 aa16.93■□□□□ 0.3
CMTM3-212ENST00000566121 S1PR5Q9H228 398 aa16.93■□□□□ 0.3
CMTM3-212ENST00000566121 KCNH6Q9H252 994 aa16.93■□□□□ 0.3
CMTM3-212ENST00000566121 TTC12Q9H892 705 aaPredicted RBP16.93■□□□□ 0.3
CMTM3-212ENST00000566121 PIN4Q9Y237 131 aaKnown RBP16.93■□□□□ 0.3
CMTM3-212ENST00000566121 MUC6Q6W4X9 2439 aa16.93■□□□□ 0.3
CMTM3-212ENST00000566121 ZMYM2Q9UBW7 1377 aa16.92■□□□□ 0.3
CMTM3-212ENST00000566121 CSDE1O75534 798 aaKnown RBP16.92■□□□□ 0.3
CMTM3-212ENST00000566121 SEC24BO95487 1268 aa16.92■□□□□ 0.3
CMTM3-212ENST00000566121 ARL2P36404 184 aa16.92■□□□□ 0.3
CMTM3-212ENST00000566121 TRAPPC10P48553 1259 aa16.92■□□□□ 0.3
CMTM3-212ENST00000566121 BCAR1P56945 870 aa16.92■□□□□ 0.3
CMTM3-212ENST00000566121 HMGN5P82970 282 aaKnown RBP16.92■□□□□ 0.3
CMTM3-212ENST00000566121 SMC1AQ14683 1233 aaKnown RBP16.92■□□□□ 0.3
CMTM3-212ENST00000566121 EMC2Q15006 297 aa16.92■□□□□ 0.3
CMTM3-212ENST00000566121 NOMO2Q5JPE7 1267 aa16.92■□□□□ 0.3
CMTM3-212ENST00000566121 NCAPH2Q6IBW4 605 aa16.92■□□□□ 0.3
CMTM3-212ENST00000566121 EP400NLQ6ZTU2 488 aa16.92■□□□□ 0.3
CMTM3-212ENST00000566121 DDX53Q86TM3 631 aaKnown RBP16.92■□□□□ 0.3
CMTM3-212ENST00000566121 KSR1Q8IVT5 923 aa16.92■□□□□ 0.3
CMTM3-212ENST00000566121 ZNF668Q96K58 619 aaPredicted RBP16.92■□□□□ 0.3
CMTM3-212ENST00000566121 NLRP4Q96MN2 994 aa16.92■□□□□ 0.3
CMTM3-212ENST00000566121 MTRQ99707 1265 aa16.92■□□□□ 0.3
CMTM3-212ENST00000566121 TCF25Q9BQ70 676 aa16.92■□□□□ 0.3
CMTM3-212ENST00000566121 PHF7Q9BWX1 381 aaPredicted RBP16.92■□□□□ 0.3
CMTM3-212ENST00000566121 XPNPEP1Q9NQW7 623 aa16.92■□□□□ 0.3
CMTM3-212ENST00000566121 SH2B1Q9NRF2 756 aaPredicted RBP16.92■□□□□ 0.3
CMTM3-212ENST00000566121 HCSTQ9UBK5 93 aa16.92■□□□□ 0.3
CMTM3-212ENST00000566121 PCDHB2Q9Y5E7 798 aa16.92■□□□□ 0.3
CMTM3-212ENST00000566121 FAM205CA6NFA0 338 aa16.91■□□□□ 0.3
CMTM3-212ENST00000566121 JAK2O60674 1132 aa16.91■□□□□ 0.3
CMTM3-212ENST00000566121 C1RP00736 705 aa16.91■□□□□ 0.3
CMTM3-212ENST00000566121 GALTP07902 379 aa16.91■□□□□ 0.3
CMTM3-212ENST00000566121 NCLP19338 710 aaKnown RBP16.91■□□□□ 0.3
CMTM3-212ENST00000566121 NCBP1Q09161 790 aaKnown RBP16.91■□□□□ 0.3
CMTM3-212ENST00000566121 ST3GAL1Q11201 340 aa16.91■□□□□ 0.3
CMTM3-212ENST00000566121 TFDP1Q14186 410 aa16.91■□□□□ 0.3
CMTM3-212ENST00000566121 XKR9Q5GH70 373 aa16.91■□□□□ 0.3
CMTM3-212ENST00000566121 TMC7Q7Z402 723 aa16.91■□□□□ 0.3
CMTM3-212ENST00000566121 TPH2Q8IWU9 490 aa16.91■□□□□ 0.3
CMTM3-212ENST00000566121 FBXO18Q8NFZ0 1043 aa16.91■□□□□ 0.3
CMTM3-212ENST00000566121 VN1R2Q8NFZ6 395 aa16.91■□□□□ 0.3
CMTM3-212ENST00000566121 TMEM143Q96AN5 459 aa16.91■□□□□ 0.3
CMTM3-212ENST00000566121 TMEM169Q96HH4 297 aa16.91■□□□□ 0.3
CMTM3-212ENST00000566121 IGSF21Q96ID5 467 aa16.91■□□□□ 0.3
CMTM3-212ENST00000566121 TMEM175Q9BSA9 504 aa16.91■□□□□ 0.3
CMTM3-212ENST00000566121 POLR3CQ9BUI4 534 aaPredicted RBP16.91■□□□□ 0.3
CMTM3-212ENST00000566121 MINDY3Q9H8M7 445 aa16.91■□□□□ 0.3
CMTM3-212ENST00000566121 TUFT1Q9NNX1 390 aa16.91■□□□□ 0.3
CMTM3-212ENST00000566121 TBC1D13Q9NVG8 400 aa16.91■□□□□ 0.3
CMTM3-212ENST00000566121 DBR1Q9UK59 544 aaKnown RBP16.91■□□□□ 0.3
CMTM3-212ENST00000566121 C2orf71A6NGG8 1288 aa16.9■□□□□ 0.3
CMTM3-212ENST00000566121 RBM25P49756 843 aaKnown RBP16.9■□□□□ 0.3
CMTM3-212ENST00000566121 RARRES1P49788 294 aa16.9■□□□□ 0.3
CMTM3-212ENST00000566121 CTTNQ14247 550 aaKnown RBP16.9■□□□□ 0.3
CMTM3-212ENST00000566121 UBXN11Q5T124 520 aa16.9■□□□□ 0.3
CMTM3-212ENST00000566121 ANKRD54Q6NXT1 300 aa16.9■□□□□ 0.3
CMTM3-212ENST00000566121 AGMOQ6ZNB7 445 aa16.9■□□□□ 0.3
CMTM3-212ENST00000566121 BMP8AQ7Z5Y6 402 aa16.9■□□□□ 0.3
CMTM3-212ENST00000566121 RBM23Q86U06 439 aaKnown RBP16.9■□□□□ 0.3
CMTM3-212ENST00000566121 GPR65Q8IYL9 337 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms