RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 NOX5Q96PH1 765 aa5.39□□□□□ -1.55
LINC00561-201ENST00000565815 AMNQ9BXJ7 453 aa5.39□□□□□ -1.55
LINC00561-201ENST00000565815 NSUN3Q9H649 340 aaKnown RBP5.39□□□□□ -1.55
LINC00561-201ENST00000565815 KIAA0232Q92628 1395 aa5.39□□□□□ -1.55
LINC00561-201ENST00000565815 OR14I1A6ND48 311 aa5.39□□□□□ -1.55
LINC00561-201ENST00000565815 ANP32CO43423 234 aa5.39□□□□□ -1.55
LINC00561-201ENST00000565815 MPIG6BO95866 241 aa5.39□□□□□ -1.55
LINC00561-201ENST00000565815 GLI1P08151 1106 aa5.39□□□□□ -1.55
LINC00561-201ENST00000565815 GLRBP48167 497 aa5.39□□□□□ -1.55
LINC00561-201ENST00000565815 NEK2P51955 445 aa5.39□□□□□ -1.55
LINC00561-201ENST00000565815 INAVAQ3KP66 663 aa5.39□□□□□ -1.55
LINC00561-201ENST00000565815 ATG4DQ86TL0 474 aaPredicted RBP5.39□□□□□ -1.55
LINC00561-201ENST00000565815 SMARCC2Q8TAQ2 1214 aa5.39□□□□□ -1.55
LINC00561-201ENST00000565815 MYL10Q9BUA6 226 aa5.39□□□□□ -1.55
LINC00561-201ENST00000565815 DTLQ9NZJ0 730 aa5.39□□□□□ -1.55
LINC00561-201ENST00000565815 LMO7Q8WWI1 1683 aa5.39□□□□□ -1.55
LINC00561-201ENST00000565815 USP19O94966 1318 aa5.38□□□□□ -1.55
LINC00561-201ENST00000565815 ADGRF5Q8IZF2 1346 aa5.38□□□□□ -1.55
LINC00561-201ENST00000565815 PLEKHH1Q9ULM0 1364 aa5.38□□□□□ -1.55
LINC00561-201ENST00000565815 RGPD8O14715 1765 aaPredicted RBP5.38□□□□□ -1.55
LINC00561-201ENST00000565815 SBF2Q86WG5 1849 aa5.38□□□□□ -1.55
LINC00561-201ENST00000565815 FAHP16930 419 aa5.38□□□□□ -1.55
LINC00561-201ENST00000565815 GPR3P46089 330 aa5.38□□□□□ -1.55
LINC00561-201ENST00000565815 HTRA3P83110 453 aa5.38□□□□□ -1.55
LINC00561-201ENST00000565815 SRSF3P84103 164 aaKnown RBP5.38□□□□□ -1.55
LINC00561-201ENST00000565815 SRSF2Q01130 221 aaKnown RBP5.38□□□□□ -1.55
LINC00561-201ENST00000565815 SMAD4Q13485 552 aaKnown RBP5.38□□□□□ -1.55
LINC00561-201ENST00000565815 TRIM25Q14258 630 aaKnown RBP5.38□□□□□ -1.55
LINC00561-201ENST00000565815 LRRC32Q14392 662 aa5.38□□□□□ -1.55
LINC00561-201ENST00000565815 ZNF174Q15697 407 aa5.38□□□□□ -1.55
LINC00561-201ENST00000565815 WDR75Q8IWA0 830 aaKnown RBP5.38□□□□□ -1.55
LINC00561-201ENST00000565815 TPH2Q8IWU9 490 aa5.38□□□□□ -1.55
LINC00561-201ENST00000565815 HIPK4Q8NE63 616 aa5.38□□□□□ -1.55
LINC00561-201ENST00000565815 PEX11GQ96HA9 241 aa5.38□□□□□ -1.55
LINC00561-201ENST00000565815 CHPF2Q9P2E5 772 aa5.38□□□□□ -1.55
LINC00561-201ENST00000565815 NFIBO00712 420 aa5.38□□□□□ -1.55
LINC00561-201ENST00000565815 FOXP2O15409 715 aa5.38□□□□□ -1.55
LINC00561-201ENST00000565815 MYBP10242 640 aa5.38□□□□□ -1.55
LINC00561-201ENST00000565815 AFMP43652 599 aa5.38□□□□□ -1.55
LINC00561-201ENST00000565815 PFKPQ01813 784 aa5.38□□□□□ -1.55
LINC00561-201ENST00000565815 PRAMEF9Q5VWM5 478 aa5.38□□□□□ -1.55
LINC00561-201ENST00000565815 CCDC62Q6P9F0 684 aa5.38□□□□□ -1.55
LINC00561-201ENST00000565815 ETV3LQ6ZN32 361 aa5.38□□□□□ -1.55
LINC00561-201ENST00000565815 C11orf74Q86VG3 221 aa5.38□□□□□ -1.55
LINC00561-201ENST00000565815 KIF18BQ86Y91 864 aa5.38□□□□□ -1.55
LINC00561-201ENST00000565815 ADGRG2Q8IZP9 1017 aa5.38□□□□□ -1.55
LINC00561-201ENST00000565815 TACO1Q9BSH4 297 aaKnown RBP5.38□□□□□ -1.55
LINC00561-201ENST00000565815 MCOLN1Q9GZU1 580 aa5.38□□□□□ -1.55
LINC00561-201ENST00000565815 QRSL1Q9H0R6 528 aaKnown RBP5.38□□□□□ -1.55
LINC00561-201ENST00000565815 CCM2LQ9NUG4 571 aaPredicted RBP5.38□□□□□ -1.55
LINC00561-201ENST00000565815 IP6K2Q9UHH9 426 aa5.38□□□□□ -1.55
LINC00561-201ENST00000565815 POLR3AO14802 1390 aaPredicted RBP5.38□□□□□ -1.55
LINC00561-201ENST00000565815 CCDC7Q96M83 1385 aa5.38□□□□□ -1.55
LINC00561-201ENST00000565815 IL18BPO95998 194 aa5.37□□□□□ -1.55
LINC00561-201ENST00000565815 CDR1P51861 262 aa5.37□□□□□ -1.55
LINC00561-201ENST00000565815 DBPQ10586 325 aaPredicted RBP5.37□□□□□ -1.55
LINC00561-201ENST00000565815 TXNRD1Q16881 649 aa5.37□□□□□ -1.55
LINC00561-201ENST00000565815 PITRM1Q5JRX3 1037 aa5.37□□□□□ -1.55
LINC00561-201ENST00000565815 PGM2L1Q6PCE3 622 aa5.37□□□□□ -1.55
LINC00561-201ENST00000565815 NECAB2Q7Z6G3 386 aa5.37□□□□□ -1.55
LINC00561-201ENST00000565815 AMIGO3Q86WK7 504 aa5.37□□□□□ -1.55
LINC00561-201ENST00000565815 IGDCC3Q8IVU1 814 aa5.37□□□□□ -1.55
LINC00561-201ENST00000565815 LMBR1Q8WVP7 490 aa5.37□□□□□ -1.55
LINC00561-201ENST00000565815 EAF2Q96CJ1 260 aaPredicted RBP5.37□□□□□ -1.55
LINC00561-201ENST00000565815 CNTD2Q9H8S5 307 aa5.37□□□□□ -1.55
LINC00561-201ENST00000565815 MBD1Q9UIS9 605 aaPredicted RBP5.37□□□□□ -1.55
LINC00561-201ENST00000565815 SHANK3Q9BYB0 1731 aa5.37□□□□□ -1.55
LINC00561-201ENST00000565815 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.37□□□□□ -1.55
LINC00561-201ENST00000565815 ALG1L2C9J202 215 aa5.37□□□□□ -1.55
LINC00561-201ENST00000565815 PRLP01236 227 aa5.37□□□□□ -1.55
LINC00561-201ENST00000565815 AOAHP28039 575 aa5.37□□□□□ -1.55
LINC00561-201ENST00000565815 ADCY8P40145 1251 aa5.37□□□□□ -1.55
LINC00561-201ENST00000565815 MAPKAPK2P49137 400 aa5.37□□□□□ -1.55
LINC00561-201ENST00000565815 PRELPP51888 382 aa5.37□□□□□ -1.55
LINC00561-201ENST00000565815 CLUL1Q15846 466 aa5.37□□□□□ -1.55
LINC00561-201ENST00000565815 MIB1Q86YT6 1006 aa5.37□□□□□ -1.55
LINC00561-201ENST00000565815 LYSMD2Q8IV50 215 aa5.37□□□□□ -1.55
LINC00561-201ENST00000565815 PPM1NQ8N819 430 aa5.37□□□□□ -1.55
LINC00561-201ENST00000565815 PRAM1Q96QH2 718 aa5.37□□□□□ -1.55
LINC00561-201ENST00000565815 RHOBTB2Q9BYZ6 727 aa5.37□□□□□ -1.55
LINC00561-201ENST00000565815 LUC7L2Q9Y383 392 aaKnown RBP5.37□□□□□ -1.55
LINC00561-201ENST00000565815 TONSLQ96HA7 1378 aa5.36□□□□□ -1.55
LINC00561-201ENST00000565815 ZBTB7AO95365 584 aa5.36□□□□□ -1.55
LINC00561-201ENST00000565815 APPP05067 770 aa5.36□□□□□ -1.55
LINC00561-201ENST00000565815 SLC6A3Q01959 620 aa5.36□□□□□ -1.55
LINC00561-201ENST00000565815 SNX17Q15036 470 aa5.36□□□□□ -1.55
LINC00561-201ENST00000565815 MLANAQ16655 118 aa5.36□□□□□ -1.55
LINC00561-201ENST00000565815 C1orf162Q8NEQ5 155 aaPredicted RBP5.36□□□□□ -1.55
LINC00561-201ENST00000565815 GORASP1Q9BQQ3 440 aa5.36□□□□□ -1.55
LINC00561-201ENST00000565815 ZDHHC5Q9C0B5 715 aa5.36□□□□□ -1.55
LINC00561-201ENST00000565815 GCM1Q9NP62 436 aa5.36□□□□□ -1.55
LINC00561-201ENST00000565815 AASDHPPTQ9NRN7 309 aa5.36□□□□□ -1.55
LINC00561-201ENST00000565815 SERPINB13Q9UIV8 391 aa5.36□□□□□ -1.55
LINC00561-201ENST00000565815 AKAP12Q02952 1782 aa5.36□□□□□ -1.55
LINC00561-201ENST00000565815 COL5A2P05997 1499 aaPredicted RBP5.36□□□□□ -1.55
LINC00561-201ENST00000565815 WNK3Q9BYP7 1800 aa5.36□□□□□ -1.55
LINC00561-201ENST00000565815 GOLGA8AA7E2F4 631 aa5.36□□□□□ -1.55
LINC00561-201ENST00000565815 GOLGA8BA8MQT2 603 aa5.36□□□□□ -1.55
LINC00561-201ENST00000565815 PLA2G1BP04054 148 aaKnown RBP5.36□□□□□ -1.55
LINC00561-201ENST00000565815 TCIRG1Q13488 830 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms