RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 PRKAG3Q9UGI9 489 aa18.61■□□□□ 0.57
USB1-211ENST00000565662 TTC28Q96AY4 2481 aa18.6■□□□□ 0.57
USB1-211ENST00000565662 NCOR1O75376 2440 aa18.6■□□□□ 0.57
USB1-211ENST00000565662 POTEMA6NI47 508 aa18.6■□□□□ 0.57
USB1-211ENST00000565662 H3BQV1 296 aa18.6■□□□□ 0.57
USB1-211ENST00000565662 FGF18O76093 207 aa18.6■□□□□ 0.57
USB1-211ENST00000565662 FGFR1P11362 822 aa18.6■□□□□ 0.57
USB1-211ENST00000565662 IBSPP21815 317 aaPredicted RBP18.6■□□□□ 0.57
USB1-211ENST00000565662 ALDH7A1P49419 539 aaKnown RBP18.6■□□□□ 0.57
USB1-211ENST00000565662 PPP2R5AQ15172 486 aa18.6■□□□□ 0.57
USB1-211ENST00000565662 POP1Q99575 1024 aaKnown RBP18.6■□□□□ 0.57
USB1-211ENST00000565662 SH2D3AQ9BRG2 576 aa18.6■□□□□ 0.57
USB1-211ENST00000565662 C2orf40Q9H1Z8 148 aa18.6■□□□□ 0.57
USB1-211ENST00000565662 ATG2AQ2TAZ0 1938 aa18.6■□□□□ 0.57
USB1-211ENST00000565662 PLXNA4Q9HCM2 1894 aa18.59■□□□□ 0.57
USB1-211ENST00000565662 VCANP13611 3396 aa18.59■□□□□ 0.57
USB1-211ENST00000565662 BRWD1Q9NSI6 2320 aa18.59■□□□□ 0.57
USB1-211ENST00000565662 BMP15O95972 392 aa18.59■□□□□ 0.57
USB1-211ENST00000565662 SRGAP2CP0DJJ0 459 aa18.59■□□□□ 0.57
USB1-211ENST00000565662 ATP2B1P20020 1258 aa18.59■□□□□ 0.57
USB1-211ENST00000565662 PTENP60484 403 aa18.59■□□□□ 0.57
USB1-211ENST00000565662 GIT2Q14161 759 aa18.59■□□□□ 0.57
USB1-211ENST00000565662 CTC1Q2NKJ3 1217 aa18.59■□□□□ 0.57
USB1-211ENST00000565662 KCNT2Q6UVM3 1135 aa18.59■□□□□ 0.57
USB1-211ENST00000565662 ZBTB8OSQ8IWT0 167 aa18.59■□□□□ 0.57
USB1-211ENST00000565662 RNF169Q8NCN4 708 aa18.59■□□□□ 0.57
USB1-211ENST00000565662 MRPS27Q92552 414 aaKnown RBP18.59■□□□□ 0.57
USB1-211ENST00000565662 TMEM143Q96AN5 459 aa18.59■□□□□ 0.57
USB1-211ENST00000565662 TMX3Q96JJ7 454 aa18.59■□□□□ 0.57
USB1-211ENST00000565662 CWH43Q9H720 699 aa18.59■□□□□ 0.57
USB1-211ENST00000565662 ALG13Q9NP73 1137 aaKnown RBP18.59■□□□□ 0.57
USB1-211ENST00000565662 CLDND1Q9NY35 253 aa18.59■□□□□ 0.57
USB1-211ENST00000565662 SPG21Q9NZD8 308 aa18.59■□□□□ 0.57
USB1-211ENST00000565662 ARHGEF35A5YM69 484 aa18.58■□□□□ 0.56
USB1-211ENST00000565662 TECP42680 631 aa18.58■□□□□ 0.56
USB1-211ENST00000565662 KCNQ1P51787 676 aa18.58■□□□□ 0.56
USB1-211ENST00000565662 CATSPER3Q86XQ3 398 aa18.58■□□□□ 0.56
USB1-211ENST00000565662 EFHBQ8N7U6 833 aa18.58■□□□□ 0.56
USB1-211ENST00000565662 TMEM169Q96HH4 297 aa18.58■□□□□ 0.56
USB1-211ENST00000565662 TMEM60Q9H2L4 133 aa18.58■□□□□ 0.56
USB1-211ENST00000565662 LRWD1Q9UFC0 647 aa18.58■□□□□ 0.56
USB1-211ENST00000565662 KCNG1Q9UIX4 513 aa18.58■□□□□ 0.56
USB1-211ENST00000565662 SMC3Q9UQE7 1217 aa18.58■□□□□ 0.56
USB1-211ENST00000565662 SLC26A4O43511 780 aa18.57■□□□□ 0.56
USB1-211ENST00000565662 PDCP20941 246 aa18.57■□□□□ 0.56
USB1-211ENST00000565662 ARL2P36404 184 aa18.57■□□□□ 0.56
USB1-211ENST00000565662 GATMP50440 423 aa18.57■□□□□ 0.56
USB1-211ENST00000565662 RNASELQ05823 741 aaKnown RBP18.57■□□□□ 0.56
USB1-211ENST00000565662 ZNF174Q15697 407 aa18.57■□□□□ 0.56
USB1-211ENST00000565662 NOMO2Q5JPE7 1267 aa18.57■□□□□ 0.56
USB1-211ENST00000565662 KRT79Q5XKE5 535 aa18.57■□□□□ 0.56
USB1-211ENST00000565662 PTCRAQ6ISU1 281 aaPredicted RBP18.57■□□□□ 0.56
USB1-211ENST00000565662 APBB1IPQ7Z5R6 666 aaPredicted RBP18.57■□□□□ 0.56
USB1-211ENST00000565662 HELQQ8TDG4 1101 aa18.57■□□□□ 0.56
USB1-211ENST00000565662 MICAL1Q8TDZ2 1067 aa18.57■□□□□ 0.56
USB1-211ENST00000565662 ZNF668Q96K58 619 aaPredicted RBP18.57■□□□□ 0.56
USB1-211ENST00000565662 TRIM6Q9C030 488 aaPredicted RBP18.57■□□□□ 0.56
USB1-211ENST00000565662 RSAD1Q9HA92 442 aa18.57■□□□□ 0.56
USB1-211ENST00000565662 XPNPEP1Q9NQW7 623 aa18.57■□□□□ 0.56
USB1-211ENST00000565662 PRMT7Q9NVM4 692 aaPredicted RBP18.57■□□□□ 0.56
USB1-211ENST00000565662 PCDHB2Q9Y5E7 798 aa18.57■□□□□ 0.56
USB1-211ENST00000565662 SPTBN5Q9NRC6 3674 aaKnown RBP18.56■□□□□ 0.56
USB1-211ENST00000565662 INO80B-WBP1J3KQ70 363 aa18.56■□□□□ 0.56
USB1-211ENST00000565662 USO1O60763 962 aaKnown RBP18.56■□□□□ 0.56
USB1-211ENST00000565662 SPATA31C1P0DKV0 1188 aa18.56■□□□□ 0.56
USB1-211ENST00000565662 ATF7P17544 494 aaPredicted RBP18.56■□□□□ 0.56
USB1-211ENST00000565662 NCLP19338 710 aaKnown RBP18.56■□□□□ 0.56
USB1-211ENST00000565662 FGFR4P22455 802 aa18.56■□□□□ 0.56
USB1-211ENST00000565662 NDUFV1P49821 464 aa18.56■□□□□ 0.56
USB1-211ENST00000565662 HYAL1Q12794 435 aa18.56■□□□□ 0.56
USB1-211ENST00000565662 SMAD4Q13485 552 aaKnown RBP18.56■□□□□ 0.56
USB1-211ENST00000565662 CLLU1OSQ5K130 101 aa18.56■□□□□ 0.56
USB1-211ENST00000565662 DTHD1Q6ZMT9 781 aa18.56■□□□□ 0.56
USB1-211ENST00000565662 MRPL10Q7Z7H8 261 aaKnown RBP18.56■□□□□ 0.56
USB1-211ENST00000565662 KSR1Q8IVT5 923 aa18.56■□□□□ 0.56
USB1-211ENST00000565662 IGSF22Q8N9C0 903 aa18.56■□□□□ 0.56
USB1-211ENST00000565662 KIFAP3Q92845 792 aa18.56■□□□□ 0.56
USB1-211ENST00000565662 TMEM175Q9BSA9 504 aa18.56■□□□□ 0.56
USB1-211ENST00000565662 TIPINQ9BVW5 301 aa18.56■□□□□ 0.56
USB1-211ENST00000565662 C1QTNF1Q9BXJ1 281 aa18.56■□□□□ 0.56
USB1-211ENST00000565662 POLR3FQ9H1D9 316 aaPredicted RBP18.56■□□□□ 0.56
USB1-211ENST00000565662 ENTPD7Q9NQZ7 604 aa18.56■□□□□ 0.56
USB1-211ENST00000565662 RNF19AQ9NV58 838 aa18.56■□□□□ 0.56
USB1-211ENST00000565662 GRXCR2A6NFK2 248 aa18.55■□□□□ 0.56
USB1-211ENST00000565662 NR1I2O75469 434 aa18.55■□□□□ 0.56
USB1-211ENST00000565662 GJB2P29033 226 aa18.55■□□□□ 0.56
USB1-211ENST00000565662 CCT6AP40227 531 aaKnown RBP18.55■□□□□ 0.56
USB1-211ENST00000565662 CAPSQ13938 189 aa18.55■□□□□ 0.56
USB1-211ENST00000565662 SMC1AQ14683 1233 aaKnown RBP18.55■□□□□ 0.56
USB1-211ENST00000565662 ARL6IP4Q66PJ3 421 aaKnown RBP18.55■□□□□ 0.56
USB1-211ENST00000565662 MCTP1Q6DN14 999 aa18.55■□□□□ 0.56
USB1-211ENST00000565662 PPP4R3CPQ6ZMV5 832 aa18.55■□□□□ 0.56
USB1-211ENST00000565662 EP400NLQ6ZTU2 488 aa18.55■□□□□ 0.56
USB1-211ENST00000565662 BRAPQ7Z569 592 aa18.55■□□□□ 0.56
USB1-211ENST00000565662 ZNF579Q8NAF0 562 aaKnown RBP18.55■□□□□ 0.56
USB1-211ENST00000565662 PIGOQ8TEQ8 1089 aa18.55■□□□□ 0.56
USB1-211ENST00000565662 IFT74Q96LB3 600 aa18.55■□□□□ 0.56
USB1-211ENST00000565662 FAM193BQ96PV7 902 aaPredicted RBP18.55■□□□□ 0.56
USB1-211ENST00000565662 NT5C3AQ9H0P0 336 aa18.55■□□□□ 0.56
USB1-211ENST00000565662 TLE6Q9H808 572 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms