RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 PPP1R9AQ9ULJ8 1098 aa17.56■□□□□ 0.4
LINC00554-201ENST00000564841 COL4A3BPQ9Y5P4 624 aa17.56■□□□□ 0.4
LINC00554-201ENST00000564841 TIAM2Q8IVF5 1701 aa17.56■□□□□ 0.4
LINC00554-201ENST00000564841 CCDC169A6NNP5 214 aa17.56■□□□□ 0.4
LINC00554-201ENST00000564841 TDP2O95551 362 aa17.56■□□□□ 0.4
LINC00554-201ENST00000564841 GNAZP19086 355 aa17.56■□□□□ 0.4
LINC00554-201ENST00000564841 IRF2BP2Q7Z5L9 587 aa17.56■□□□□ 0.4
LINC00554-201ENST00000564841 EZH1Q92800 747 aaPredicted RBP17.56■□□□□ 0.4
LINC00554-201ENST00000564841 C18orf8Q96DM3 657 aa17.56■□□□□ 0.4
LINC00554-201ENST00000564841 PGM2Q96G03 612 aa17.56■□□□□ 0.4
LINC00554-201ENST00000564841 MTA3Q9BTC8 594 aa17.56■□□□□ 0.4
LINC00554-201ENST00000564841 AJAP1Q9UKB5 411 aaPredicted RBP17.56■□□□□ 0.4
LINC00554-201ENST00000564841 USP17L5A8MUK1 530 aa17.55■□□□□ 0.4
LINC00554-201ENST00000564841 PRPHP41219 470 aa17.55■□□□□ 0.4
LINC00554-201ENST00000564841 AUHQ13825 339 aaKnown RBP17.55■□□□□ 0.4
LINC00554-201ENST00000564841 CGB2Q6NT52 195 aa17.55■□□□□ 0.4
LINC00554-201ENST00000564841 SLF2Q8IX21 1173 aa17.55■□□□□ 0.4
LINC00554-201ENST00000564841 B4GALNT2Q8NHY0 566 aa17.55■□□□□ 0.4
LINC00554-201ENST00000564841 SEC14L1Q92503 715 aa17.55■□□□□ 0.4
LINC00554-201ENST00000564841 DNAJC17Q9NVM6 304 aaKnown RBP17.55■□□□□ 0.4
LINC00554-201ENST00000564841 DAAM1Q9Y4D1 1078 aa17.55■□□□□ 0.4
LINC00554-201ENST00000564841 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.55■□□□□ 0.4
LINC00554-201ENST00000564841 TMEM120BA0PK00 339 aa17.55■□□□□ 0.4
LINC00554-201ENST00000564841 CCDC188H7C350 402 aa17.55■□□□□ 0.4
LINC00554-201ENST00000564841 SMAPO00193 183 aa17.55■□□□□ 0.4
LINC00554-201ENST00000564841 SUN1O94901 812 aa17.55■□□□□ 0.4
LINC00554-201ENST00000564841 KRT13P13646 458 aa17.55■□□□□ 0.4
LINC00554-201ENST00000564841 AKR1B1P15121 316 aa17.55■□□□□ 0.4
LINC00554-201ENST00000564841 ABCB4P21439 1286 aa17.55■□□□□ 0.4
LINC00554-201ENST00000564841 UBE2SQ16763 222 aa17.55■□□□□ 0.4
LINC00554-201ENST00000564841 NT5DC3Q86UY8 548 aa17.55■□□□□ 0.4
LINC00554-201ENST00000564841 RBM46Q8TBY0 533 aaKnown RBP17.55■□□□□ 0.4
LINC00554-201ENST00000564841 DDX12PQ92771 950 aa17.55■□□□□ 0.4
LINC00554-201ENST00000564841 ITFG2Q969R8 447 aa17.55■□□□□ 0.4
LINC00554-201ENST00000564841 ERP44Q9BS26 406 aa17.55■□□□□ 0.4
LINC00554-201ENST00000564841 NSRP1Q9H0G5 558 aaKnown RBP17.55■□□□□ 0.4
LINC00554-201ENST00000564841 ZHX3Q9H4I2 956 aa17.55■□□□□ 0.4
LINC00554-201ENST00000564841 SLITRK6Q9H5Y7 841 aa17.55■□□□□ 0.4
LINC00554-201ENST00000564841 TMOD4Q9NZQ9 345 aa17.55■□□□□ 0.4
LINC00554-201ENST00000564841 KLRG2A4D1S0 409 aaPredicted RBP17.54■□□□□ 0.4
LINC00554-201ENST00000564841 ENTPD5O75356 428 aa17.54■□□□□ 0.4
LINC00554-201ENST00000564841 LUC7L3O95232 432 aaKnown RBP17.54■□□□□ 0.4
LINC00554-201ENST00000564841 TARSP26639 723 aaKnown RBP17.54■□□□□ 0.4
LINC00554-201ENST00000564841 SSR1P43307 286 aaKnown RBP17.54■□□□□ 0.4
LINC00554-201ENST00000564841 ROR2Q01974 943 aaKnown RBP17.54■□□□□ 0.4
LINC00554-201ENST00000564841 DUPD1Q68J44 220 aa17.54■□□□□ 0.4
LINC00554-201ENST00000564841 C15orf52Q6ZUT6 534 aaKnown RBP17.54■□□□□ 0.4
LINC00554-201ENST00000564841 GUF1Q8N442 669 aaKnown RBP17.54■□□□□ 0.4
LINC00554-201ENST00000564841 PNMA5Q96PV4 448 aa17.54■□□□□ 0.4
LINC00554-201ENST00000564841 LIN7AO14910 233 aaPredicted RBP17.54■□□□□ 0.4
LINC00554-201ENST00000564841 PEX11AO75192 247 aa17.54■□□□□ 0.4
LINC00554-201ENST00000564841 RNF8O76064 485 aa17.54■□□□□ 0.4
LINC00554-201ENST00000564841 NUDT17P0C025 328 aa17.54■□□□□ 0.4
LINC00554-201ENST00000564841 PLCG2P16885 1265 aa17.54■□□□□ 0.4
LINC00554-201ENST00000564841 ZNF131P52739 623 aa17.54■□□□□ 0.4
LINC00554-201ENST00000564841 AMPD3Q01432 767 aa17.54■□□□□ 0.4
LINC00554-201ENST00000564841 UNC13DQ70J99 1090 aa17.54■□□□□ 0.4
LINC00554-201ENST00000564841 SPATA21Q7Z572 469 aa17.54■□□□□ 0.4
LINC00554-201ENST00000564841 DGKHQ86XP1 1220 aa17.54■□□□□ 0.4
LINC00554-201ENST00000564841 PCMTD2Q9NV79 361 aa17.54■□□□□ 0.4
LINC00554-201ENST00000564841 HAO1Q9UJM8 370 aa17.54■□□□□ 0.4
LINC00554-201ENST00000564841 SCAF8Q9UPN6 1271 aaKnown RBP17.54■□□□□ 0.4
LINC00554-201ENST00000564841 ANKRD63C9JTQ0 380 aa17.53■□□□□ 0.4
LINC00554-201ENST00000564841 SLC37A4O43826 429 aa17.53■□□□□ 0.4
LINC00554-201ENST00000564841 CDC42EP5Q6NZY7 148 aa17.53■□□□□ 0.4
LINC00554-201ENST00000564841 MFN1Q8IWA4 741 aa17.53■□□□□ 0.4
LINC00554-201ENST00000564841 U2AF1L4Q8WU68 220 aaKnown RBP17.53■□□□□ 0.4
LINC00554-201ENST00000564841 PPP1R12CQ9BZL4 782 aa17.53■□□□□ 0.4
LINC00554-201ENST00000564841 BARHL2Q9NY43 387 aa17.53■□□□□ 0.4
LINC00554-201ENST00000564841 LMCD1Q9NZU5 365 aa17.53■□□□□ 0.4
LINC00554-201ENST00000564841 CHORDC1Q9UHD1 332 aaPredicted RBP17.53■□□□□ 0.4
LINC00554-201ENST00000564841 NPHP3-ACAD11A0A0J9YXS1 232 aa17.53■□□□□ 0.4
LINC00554-201ENST00000564841 RASGRF2O14827 1237 aa17.53■□□□□ 0.4
LINC00554-201ENST00000564841 SLC16A2P36021 539 aa17.53■□□□□ 0.4
LINC00554-201ENST00000564841 TNNI2P48788 182 aa17.53■□□□□ 0.4
LINC00554-201ENST00000564841 SLC15A2Q16348 729 aa17.53■□□□□ 0.4
LINC00554-201ENST00000564841 FOXB2Q5VYV0 432 aa17.53■□□□□ 0.4
LINC00554-201ENST00000564841 ECHDC2Q86YB7 292 aa17.53■□□□□ 0.4
LINC00554-201ENST00000564841 TEKT1Q969V4 418 aa17.53■□□□□ 0.4
LINC00554-201ENST00000564841 NUCKS1Q9H1E3 243 aaKnown RBP17.53■□□□□ 0.4
LINC00554-201ENST00000564841 GANQ9H2C0 597 aa17.53■□□□□ 0.4
LINC00554-201ENST00000564841 OCEL1Q9H607 264 aa17.53■□□□□ 0.4
LINC00554-201ENST00000564841 STXBP5LQ9Y2K9 1186 aa17.53■□□□□ 0.4
LINC00554-201ENST00000564841 ACSL3O95573 720 aa17.53■□□□□ 0.4
LINC00554-201ENST00000564841 RPL21P46778 160 aaKnown RBP17.53■□□□□ 0.4
LINC00554-201ENST00000564841 GRM4Q14833 912 aa17.53■□□□□ 0.4
LINC00554-201ENST00000564841 MIGA2Q7L4E1 593 aa17.53■□□□□ 0.4
LINC00554-201ENST00000564841 JAMLQ86YT9 394 aa17.53■□□□□ 0.4
LINC00554-201ENST00000564841 GALNT15Q8N3T1 639 aa17.53■□□□□ 0.4
LINC00554-201ENST00000564841 RASGEF1CQ8N431 466 aa17.53■□□□□ 0.4
LINC00554-201ENST00000564841 DRAXINQ8NBI3 349 aaPredicted RBP17.53■□□□□ 0.4
LINC00554-201ENST00000564841 NUDCD1Q96RS6 583 aa17.53■□□□□ 0.4
LINC00554-201ENST00000564841 ZNF287Q9HBT7 754 aa17.53■□□□□ 0.4
LINC00554-201ENST00000564841 STK32BQ9NY57 414 aa17.53■□□□□ 0.4
LINC00554-201ENST00000564841 AIPL1Q9NZN9 384 aa17.53■□□□□ 0.4
LINC00554-201ENST00000564841 RGS17Q9UGC6 210 aaPredicted RBP17.53■□□□□ 0.4
LINC00554-201ENST00000564841 LRRC42Q9Y546 428 aa17.53■□□□□ 0.4
LINC00554-201ENST00000564841 TPBGLP0DKB5 382 aa17.52■□□□□ 0.4
LINC00554-201ENST00000564841 SP100P23497 879 aaPredicted RBP17.52■□□□□ 0.4
LINC00554-201ENST00000564841 ECM1Q16610 540 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms