RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 LYPLA2O95372 231 aa7.93□□□□□ -1.14
HERPUD1-209ENST00000564678 NR3C1P04150 777 aa7.93□□□□□ -1.14
HERPUD1-209ENST00000564678 MYBP10242 640 aa7.93□□□□□ -1.14
HERPUD1-209ENST00000564678 MAGEA1P43355 309 aa7.93□□□□□ -1.14
HERPUD1-209ENST00000564678 CBX1P83916 185 aa7.93□□□□□ -1.14
HERPUD1-209ENST00000564678 ALCAMQ13740 583 aa7.93□□□□□ -1.14
HERPUD1-209ENST00000564678 C10orf76Q5T2E6 689 aa7.93□□□□□ -1.14
HERPUD1-209ENST00000564678 HGSNATQ68CP4 663 aa7.93□□□□□ -1.14
HERPUD1-209ENST00000564678 XRRA1Q6P2D8 792 aa7.93□□□□□ -1.14
HERPUD1-209ENST00000564678 ZNF720Q7Z2F6 126 aa7.93□□□□□ -1.14
HERPUD1-209ENST00000564678 SMAP1Q8IYB5 467 aaPredicted RBP7.93□□□□□ -1.14
HERPUD1-209ENST00000564678 MYCT1Q8N699 235 aa7.93□□□□□ -1.14
HERPUD1-209ENST00000564678 TMEM174Q8WUU8 243 aa7.93□□□□□ -1.14
HERPUD1-209ENST00000564678 CFHR5Q9BXR6 569 aa7.93□□□□□ -1.14
HERPUD1-209ENST00000564678 SAP130Q9H0E3 1048 aa7.93□□□□□ -1.14
HERPUD1-209ENST00000564678 UNC45AQ9H3U1 944 aa7.93□□□□□ -1.14
HERPUD1-209ENST00000564678 AS3MTQ9HBK9 375 aa7.93□□□□□ -1.14
HERPUD1-209ENST00000564678 ARFGAP3Q9NP61 516 aa7.93□□□□□ -1.14
HERPUD1-209ENST00000564678 JADE2Q9NQC1 790 aa7.93□□□□□ -1.14
HERPUD1-209ENST00000564678 KCNH7Q9NS40 1196 aa7.93□□□□□ -1.14
HERPUD1-209ENST00000564678 ZNF446Q9NWS9 450 aa7.93□□□□□ -1.14
HERPUD1-209ENST00000564678 ZNF112Q9UJU3 913 aa7.93□□□□□ -1.14
HERPUD1-209ENST00000564678 PPP1R9AQ9ULJ8 1098 aa7.93□□□□□ -1.14
HERPUD1-209ENST00000564678 DAAM1Q9Y4D1 1078 aa7.93□□□□□ -1.14
HERPUD1-209ENST00000564678 PCDHGA4Q9Y5G9 962 aa7.93□□□□□ -1.14
HERPUD1-209ENST00000564678 CD2APQ9Y5K6 639 aa7.93□□□□□ -1.14
HERPUD1-209ENST00000564678 UBIAD1Q9Y5Z9 338 aa7.93□□□□□ -1.14
HERPUD1-209ENST00000564678 BRCA1P38398 1863 aaKnown RBP7.93□□□□□ -1.14
HERPUD1-209ENST00000564678 CCDC85CA6NKD9 419 aa7.93□□□□□ -1.14
HERPUD1-209ENST00000564678 RSPH10B2B2RC85 870 aa7.93□□□□□ -1.14
HERPUD1-209ENST00000564678 TGFB1I1O43294 461 aa7.93□□□□□ -1.14
HERPUD1-209ENST00000564678 RSPH10BP0C881 870 aa7.93□□□□□ -1.14
HERPUD1-209ENST00000564678 ITGB5P18084 799 aa7.93□□□□□ -1.14
HERPUD1-209ENST00000564678 ANXA13P27216 316 aa7.93□□□□□ -1.14
HERPUD1-209ENST00000564678 PSMC2P35998 433 aaKnown RBP7.93□□□□□ -1.14
HERPUD1-209ENST00000564678 POLR2FP61218 127 aaKnown RBP7.93□□□□□ -1.14
HERPUD1-209ENST00000564678 CYP27A1Q02318 531 aa7.93□□□□□ -1.14
HERPUD1-209ENST00000564678 CKAP4Q07065 602 aaKnown RBP7.93□□□□□ -1.14
HERPUD1-209ENST00000564678 EXOC3L4Q17RC7 722 aa7.93□□□□□ -1.14
HERPUD1-209ENST00000564678 MIER3Q7Z3K6 550 aa7.93□□□□□ -1.14
HERPUD1-209ENST00000564678 FAM178BQ8IXR5 827 aa7.93□□□□□ -1.14
HERPUD1-209ENST00000564678 PGBD3Q8N328 593 aa7.93□□□□□ -1.14
HERPUD1-209ENST00000564678 CCDC155Q8N6L0 562 aa7.93□□□□□ -1.14
HERPUD1-209ENST00000564678 TIPINQ9BVW5 301 aa7.93□□□□□ -1.14
HERPUD1-209ENST00000564678 LSM14BQ9BX40 385 aaKnown RBP7.93□□□□□ -1.14
HERPUD1-209ENST00000564678 SNTG2Q9NY99 539 aa7.93□□□□□ -1.14
HERPUD1-209ENST00000564678 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.93□□□□□ -1.14
HERPUD1-209ENST00000564678 TRIM10Q9UDY6 481 aa7.93□□□□□ -1.14
HERPUD1-209ENST00000564678 CNOT7Q9UIV1 285 aaKnown RBP7.93□□□□□ -1.14
HERPUD1-209ENST00000564678 DBR1Q9UK59 544 aaKnown RBP7.93□□□□□ -1.14
HERPUD1-209ENST00000564678 CTDP1Q9Y5B0 961 aaPredicted RBP7.93□□□□□ -1.14
HERPUD1-209ENST00000564678 ASTN1O14525 1302 aa7.93□□□□□ -1.14
HERPUD1-209ENST00000564678 SRCAPQ6ZRS2 3230 aa7.92□□□□□ -1.14
HERPUD1-209ENST00000564678 DHX15O43143 795 aaKnown RBP7.92□□□□□ -1.14
HERPUD1-209ENST00000564678 CHMP2AO43633 222 aa7.92□□□□□ -1.14
HERPUD1-209ENST00000564678 ERLIN1O75477 346 aa7.92□□□□□ -1.14
HERPUD1-209ENST00000564678 FLOT1O75955 427 aa7.92□□□□□ -1.14
HERPUD1-209ENST00000564678 AKAP3O75969 853 aa7.92□□□□□ -1.14
HERPUD1-209ENST00000564678 PLEKP08567 350 aaPredicted RBP7.92□□□□□ -1.14
HERPUD1-209ENST00000564678 ALAS1P13196 640 aa7.92□□□□□ -1.14
HERPUD1-209ENST00000564678 ZSCAN20P17040 1043 aaPredicted RBP7.92□□□□□ -1.14
HERPUD1-209ENST00000564678 MCM3P25205 808 aa7.92□□□□□ -1.14
HERPUD1-209ENST00000564678 OAZ1P54368 228 aa7.92□□□□□ -1.14
HERPUD1-209ENST00000564678 UBXN2AP68543 259 aa7.92□□□□□ -1.14
HERPUD1-209ENST00000564678 FAM193AP78312 1265 aa7.92□□□□□ -1.14
HERPUD1-209ENST00000564678 ITIH3Q06033 890 aa7.92□□□□□ -1.14
HERPUD1-209ENST00000564678 TKFCQ3LXA3 575 aa7.92□□□□□ -1.14
HERPUD1-209ENST00000564678 IQCEQ6IPM2 695 aa7.92□□□□□ -1.14
HERPUD1-209ENST00000564678 CC2D1AQ6P1N0 951 aaPredicted RBP7.92□□□□□ -1.14
HERPUD1-209ENST00000564678 GBP6Q6ZN66 633 aa7.92□□□□□ -1.14
HERPUD1-209ENST00000564678 HS2ST1Q7LGA3 356 aa7.92□□□□□ -1.14
HERPUD1-209ENST00000564678 SLC9A9Q8IVB4 645 aa7.92□□□□□ -1.14
HERPUD1-209ENST00000564678 MSL3Q8N5Y2 521 aaKnown RBP7.92□□□□□ -1.14
HERPUD1-209ENST00000564678 SLC17A8Q8NDX2 589 aa7.92□□□□□ -1.14
HERPUD1-209ENST00000564678 SYTL5Q8TDW5 730 aaPredicted RBP7.92□□□□□ -1.14
HERPUD1-209ENST00000564678 BORCS6Q96GS4 357 aa7.92□□□□□ -1.14
HERPUD1-209ENST00000564678 ALS2CR12Q96Q35 445 aa7.92□□□□□ -1.14
HERPUD1-209ENST00000564678 FIZ1Q96SL8 496 aa7.92□□□□□ -1.14
HERPUD1-209ENST00000564678 LXNQ9BS40 222 aa7.92□□□□□ -1.14
HERPUD1-209ENST00000564678 STRA6Q9BX79 667 aa7.92□□□□□ -1.14
HERPUD1-209ENST00000564678 GBP3Q9H0R5 595 aa7.92□□□□□ -1.14
HERPUD1-209ENST00000564678 GANQ9H2C0 597 aa7.92□□□□□ -1.14
HERPUD1-209ENST00000564678 NLRC4Q9NPP4 1024 aa7.92□□□□□ -1.14
HERPUD1-209ENST00000564678 LARSQ9P2J5 1176 aaKnown RBP7.92□□□□□ -1.14
HERPUD1-209ENST00000564678 PUF60Q9UHX1 559 aaKnown RBP7.92□□□□□ -1.14
HERPUD1-209ENST00000564678 HACL1Q9UJ83 578 aa7.92□□□□□ -1.14
HERPUD1-209ENST00000564678 FHOD1Q9Y613 1164 aa7.92□□□□□ -1.14
HERPUD1-209ENST00000564678 ATP8B3O60423 1300 aa7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 ARHGEF35A5YM69 484 aa7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 C19orf81C9J6K1 198 aa7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 NFIBO00712 420 aa7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 KIF4AO95239 1232 aa7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 ATP1A1P05023 1023 aaKnown RBP7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 PNMA6AP0CW24 399 aaPredicted RBP7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 VCAM1P19320 739 aa7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 QARSP47897 775 aaKnown RBP7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 GMPSP49915 693 aaPredicted RBP7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 BACE1P56817 501 aa7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 SNRPFP62306 86 aaKnown RBP7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 PPP2R5AQ15172 486 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms