RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 CBX2Q14781 532 aaPredicted RBP13.61□□□□□ -0.23
GTF3C1-204ENST00000564664 PLA2G4FQ68DD2 849 aa13.61□□□□□ -0.23
GTF3C1-204ENST00000564664 MRPL10Q7Z7H8 261 aaKnown RBP13.61□□□□□ -0.23
GTF3C1-204ENST00000564664 SLC39A11Q8N1S5 342 aa13.61□□□□□ -0.23
GTF3C1-204ENST00000564664 MRPL43Q8N983 215 aaKnown RBP13.61□□□□□ -0.23
GTF3C1-204ENST00000564664 CNNM3Q8NE01 707 aa13.61□□□□□ -0.23
GTF3C1-204ENST00000564664 NSUN7Q8NE18 718 aaKnown RBP13.61□□□□□ -0.23
GTF3C1-204ENST00000564664 HELQQ8TDG4 1101 aa13.61□□□□□ -0.23
GTF3C1-204ENST00000564664 NLRP4Q96MN2 994 aa13.61□□□□□ -0.23
GTF3C1-204ENST00000564664 HSD17B14Q9BPX1 270 aa13.61□□□□□ -0.23
GTF3C1-204ENST00000564664 SH2D3AQ9BRG2 576 aa13.61□□□□□ -0.23
GTF3C1-204ENST00000564664 LXNQ9BS40 222 aa13.61□□□□□ -0.23
GTF3C1-204ENST00000564664 PHF7Q9BWX1 381 aaPredicted RBP13.61□□□□□ -0.23
GTF3C1-204ENST00000564664 KCNH6Q9H252 994 aa13.61□□□□□ -0.23
GTF3C1-204ENST00000564664 UBN1Q9NPG3 1134 aa13.61□□□□□ -0.23
GTF3C1-204ENST00000564664 GJB4Q9NTQ9 266 aa13.61□□□□□ -0.23
GTF3C1-204ENST00000564664 ANKEF1Q9NU02 776 aa13.61□□□□□ -0.23
GTF3C1-204ENST00000564664 AGPAT5Q9NUQ2 364 aa13.61□□□□□ -0.23
GTF3C1-204ENST00000564664 FAM105AQ9NUU6 356 aa13.61□□□□□ -0.23
GTF3C1-204ENST00000564664 DAXXQ9UER7 740 aaPredicted RBP13.61□□□□□ -0.23
GTF3C1-204ENST00000564664 PIN4Q9Y237 131 aaKnown RBP13.61□□□□□ -0.23
GTF3C1-204ENST00000564664 LOC730098B7Z3J9 87 aa13.6□□□□□ -0.23
GTF3C1-204ENST00000564664 AXLP30530 894 aa13.6□□□□□ -0.23
GTF3C1-204ENST00000564664 BCAR1P56945 870 aa13.6□□□□□ -0.23
GTF3C1-204ENST00000564664 SPIRE1Q08AE8 756 aa13.6□□□□□ -0.23
GTF3C1-204ENST00000564664 LAMTOR4Q0VGL1 99 aa13.6□□□□□ -0.23
GTF3C1-204ENST00000564664 NR5A1Q13285 461 aa13.6□□□□□ -0.23
GTF3C1-204ENST00000564664 CALCRLQ16602 461 aa13.6□□□□□ -0.23
GTF3C1-204ENST00000564664 XKR9Q5GH70 373 aa13.6□□□□□ -0.23
GTF3C1-204ENST00000564664 NOMO2Q5JPE7 1267 aa13.6□□□□□ -0.23
GTF3C1-204ENST00000564664 PLPP4Q5VZY2 271 aa13.6□□□□□ -0.23
GTF3C1-204ENST00000564664 NCAPH2Q6IBW4 605 aa13.6□□□□□ -0.23
GTF3C1-204ENST00000564664 DDX53Q86TM3 631 aaKnown RBP13.6□□□□□ -0.23
GTF3C1-204ENST00000564664 RNF135Q8IUD6 432 aa13.6□□□□□ -0.23
GTF3C1-204ENST00000564664 KSR1Q8IVT5 923 aa13.6□□□□□ -0.23
GTF3C1-204ENST00000564664 TPH2Q8IWU9 490 aa13.6□□□□□ -0.23
GTF3C1-204ENST00000564664 NECAB1Q8N987 351 aa13.6□□□□□ -0.23
GTF3C1-204ENST00000564664 SUSD6Q92537 303 aa13.6□□□□□ -0.23
GTF3C1-204ENST00000564664 CASP10Q92851 521 aa13.6□□□□□ -0.23
GTF3C1-204ENST00000564664 TMEM169Q96HH4 297 aa13.6□□□□□ -0.23
GTF3C1-204ENST00000564664 PLXNA4Q9HCM2 1894 aa13.6□□□□□ -0.23
GTF3C1-204ENST00000564664 RGL1Q9NZL6 768 aa13.6□□□□□ -0.23
GTF3C1-204ENST00000564664 HCSTQ9UBK5 93 aa13.6□□□□□ -0.23
GTF3C1-204ENST00000564664 BARX2Q9UMQ3 279 aaPredicted RBP13.6□□□□□ -0.23
GTF3C1-204ENST00000564664 USP15Q9Y4E8 981 aaPredicted RBP13.6□□□□□ -0.23
GTF3C1-204ENST00000564664 PCDHB2Q9Y5E7 798 aa13.6□□□□□ -0.23
GTF3C1-204ENST00000564664 IRAK3Q9Y616 596 aa13.6□□□□□ -0.23
GTF3C1-204ENST00000564664 CNTNAP2Q9UHC6 1331 aa13.6□□□□□ -0.23
GTF3C1-204ENST00000564664 C2orf71A6NGG8 1288 aa13.59□□□□□ -0.23
GTF3C1-204ENST00000564664 BTBD18B2RXH4 712 aa13.59□□□□□ -0.23
GTF3C1-204ENST00000564664 OFD1O75665 1012 aa13.59□□□□□ -0.23
GTF3C1-204ENST00000564664 SRGAP2CP0DJJ0 459 aa13.59□□□□□ -0.23
GTF3C1-204ENST00000564664 TFDP1Q14186 410 aa13.59□□□□□ -0.23
GTF3C1-204ENST00000564664 EMC2Q15006 297 aa13.59□□□□□ -0.23
GTF3C1-204ENST00000564664 SAFBQ15424 915 aaKnown RBP eCLIP13.59□□□□□ -0.23
GTF3C1-204ENST00000564664 TPRNQ4KMQ1 711 aa13.59□□□□□ -0.23
GTF3C1-204ENST00000564664 EARS2Q5JPH6 523 aaKnown RBP13.59□□□□□ -0.23
GTF3C1-204ENST00000564664 ANKRD54Q6NXT1 300 aa13.59□□□□□ -0.23
GTF3C1-204ENST00000564664 FERMT3Q86UX7 667 aa13.59□□□□□ -0.23
GTF3C1-204ENST00000564664 URGCPQ8TCY9 931 aa13.59□□□□□ -0.23
GTF3C1-204ENST00000564664 EDAQ92838 391 aa13.59□□□□□ -0.23
GTF3C1-204ENST00000564664 TMEM143Q96AN5 459 aa13.59□□□□□ -0.23
GTF3C1-204ENST00000564664 CCDC51Q96ER9 411 aa13.59□□□□□ -0.23
GTF3C1-204ENST00000564664 DYDC2Q96IM9 177 aa13.59□□□□□ -0.23
GTF3C1-204ENST00000564664 MTRQ99707 1265 aa13.59□□□□□ -0.23
GTF3C1-204ENST00000564664 EIF2AK1Q9BQI3 630 aaKnown RBP13.59□□□□□ -0.23
GTF3C1-204ENST00000564664 S1PR5Q9H228 398 aa13.59□□□□□ -0.23
GTF3C1-204ENST00000564664 TTC12Q9H892 705 aaPredicted RBP13.59□□□□□ -0.23
GTF3C1-204ENST00000564664 WRAP73Q9P2S5 460 aaPredicted RBP13.59□□□□□ -0.23
GTF3C1-204ENST00000564664 RAPGEFL1Q9UHV5 662 aa13.59□□□□□ -0.23
GTF3C1-204ENST00000564664 LIMCH1Q9UPQ0 1083 aa13.59□□□□□ -0.23
GTF3C1-204ENST00000564664 PCDHGC5Q9Y5F6 944 aa13.59□□□□□ -0.23
GTF3C1-204ENST00000564664 FAM86C2PA6NEL3 165 aa13.58□□□□□ -0.24
GTF3C1-204ENST00000564664 HIDE1A8MVS5 230 aa13.58□□□□□ -0.24
GTF3C1-204ENST00000564664 NEMFO60524 1076 aa13.58□□□□□ -0.24
GTF3C1-204ENST00000564664 DGAT1O75907 488 aa13.58□□□□□ -0.24
GTF3C1-204ENST00000564664 CXCL14O95715 111 aa13.58□□□□□ -0.24
GTF3C1-204ENST00000564664 ALDH2P05091 517 aa13.58□□□□□ -0.24
GTF3C1-204ENST00000564664 GALTP07902 379 aa13.58□□□□□ -0.24
GTF3C1-204ENST00000564664 HOXA11P31270 313 aaPredicted RBP13.58□□□□□ -0.24
GTF3C1-204ENST00000564664 TECP42680 631 aa13.58□□□□□ -0.24
GTF3C1-204ENST00000564664 RNASELQ05823 741 aaKnown RBP13.58□□□□□ -0.24
GTF3C1-204ENST00000564664 ITIH3Q06033 890 aa13.58□□□□□ -0.24
GTF3C1-204ENST00000564664 ORC2Q13416 577 aaPredicted RBP13.58□□□□□ -0.24
GTF3C1-204ENST00000564664 CTTNQ14247 550 aaKnown RBP13.58□□□□□ -0.24
GTF3C1-204ENST00000564664 IFNLR1Q8IU57 520 aaPredicted RBP13.58□□□□□ -0.24
GTF3C1-204ENST00000564664 DIS3L2Q8IYB7 885 aaKnown RBP13.58□□□□□ -0.24
GTF3C1-204ENST00000564664 ZNF579Q8NAF0 562 aaKnown RBP13.58□□□□□ -0.24
GTF3C1-204ENST00000564664 TMEM87AQ8NBN3 555 aa13.58□□□□□ -0.24
GTF3C1-204ENST00000564664 RNF149Q8NC42 400 aa13.58□□□□□ -0.24
GTF3C1-204ENST00000564664 VN1R2Q8NFZ6 395 aa13.58□□□□□ -0.24
GTF3C1-204ENST00000564664 IGSF21Q96ID5 467 aa13.58□□□□□ -0.24
GTF3C1-204ENST00000564664 MFSD14AQ96MC6 490 aa13.58□□□□□ -0.24
GTF3C1-204ENST00000564664 NECTIN4Q96NY8 510 aa13.58□□□□□ -0.24
GTF3C1-204ENST00000564664 MTMR9Q96QG7 549 aa13.58□□□□□ -0.24
GTF3C1-204ENST00000564664 LLPHQ9BRT6 129 aaKnown RBP13.58□□□□□ -0.24
GTF3C1-204ENST00000564664 TMEM175Q9BSA9 504 aa13.58□□□□□ -0.24
GTF3C1-204ENST00000564664 NFKBIZQ9BYH8 718 aa13.58□□□□□ -0.24
GTF3C1-204ENST00000564664 TBC1D13Q9NVG8 400 aa13.58□□□□□ -0.24
GTF3C1-204ENST00000564664 ERLIN2O94905 339 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms