RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 CEP152O94986 1710 aa6.31□□□□□ -1.4
CHD9-210ENST00000564582 FANCAO15360 1455 aa6.31□□□□□ -1.4
CHD9-210ENST00000564582 NRXN1Q9ULB1 1477 aa6.31□□□□□ -1.4
CHD9-210ENST00000564582 ARVCFO00192 962 aa6.31□□□□□ -1.4
CHD9-210ENST00000564582 PLD2O14939 933 aa6.31□□□□□ -1.4
CHD9-210ENST00000564582 IGSF3O75054 1194 aa6.31□□□□□ -1.4
CHD9-210ENST00000564582 CLSTN1O94985 981 aa6.31□□□□□ -1.4
CHD9-210ENST00000564582 CYP2C8P10632 490 aa6.31□□□□□ -1.4
CHD9-210ENST00000564582 RDXP35241 583 aaKnown RBP6.31□□□□□ -1.4
CHD9-210ENST00000564582 IRX1P78414 480 aaPredicted RBP6.31□□□□□ -1.4
CHD9-210ENST00000564582 FOXO4P98177 505 aa6.31□□□□□ -1.4
CHD9-210ENST00000564582 DDR1Q08345 913 aa6.31□□□□□ -1.4
CHD9-210ENST00000564582 SSPNQ14714 243 aa6.31□□□□□ -1.4
CHD9-210ENST00000564582 KRTAP19-4Q3LI73 84 aa6.31□□□□□ -1.4
CHD9-210ENST00000564582 CCDC30Q5VVM6 783 aa6.31□□□□□ -1.4
CHD9-210ENST00000564582 TCERG1LQ5VWI1 586 aa6.31□□□□□ -1.4
CHD9-210ENST00000564582 GIMAP6Q6P9H5 292 aa6.31□□□□□ -1.4
CHD9-210ENST00000564582 EP400NLQ6ZTU2 488 aa6.31□□□□□ -1.4
CHD9-210ENST00000564582 B4GALNT4Q76KP1 1039 aa6.31□□□□□ -1.4
CHD9-210ENST00000564582 NOP9Q86U38 636 aaKnown RBP6.31□□□□□ -1.4
CHD9-210ENST00000564582 FAM129CQ86XR2 697 aa6.31□□□□□ -1.4
CHD9-210ENST00000564582 HOMER1Q86YM7 354 aa6.31□□□□□ -1.4
CHD9-210ENST00000564582 CACTINQ8WUQ7 758 aaKnown RBP6.31□□□□□ -1.4
CHD9-210ENST00000564582 FBXW5Q969U6 566 aa6.31□□□□□ -1.4
CHD9-210ENST00000564582 LRRCC1Q9C099 1032 aa6.31□□□□□ -1.4
CHD9-210ENST00000564582 CXorf56Q9H5V9 222 aa6.31□□□□□ -1.4
CHD9-210ENST00000564582 SLC52A2Q9HAB3 445 aa6.31□□□□□ -1.4
CHD9-210ENST00000564582 TMEM260Q9NX78 707 aa6.31□□□□□ -1.4
CHD9-210ENST00000564582 RRP7AQ9Y3A4 280 aaKnown RBP6.31□□□□□ -1.4
CHD9-210ENST00000564582 PCDHA9Q9Y5H5 950 aa6.31□□□□□ -1.4
CHD9-210ENST00000564582 PCDHA8Q9Y5H6 950 aa6.31□□□□□ -1.4
CHD9-210ENST00000564582 CYP46A1Q9Y6A2 500 aa6.31□□□□□ -1.4
CHD9-210ENST00000564582 CCDC69A6NI79 296 aa6.3□□□□□ -1.4
CHD9-210ENST00000564582 MAP2K7O14733 419 aa6.3□□□□□ -1.4
CHD9-210ENST00000564582 WNT9AO14904 365 aa6.3□□□□□ -1.4
CHD9-210ENST00000564582 ARHGAP6O43182 974 aa6.3□□□□□ -1.4
CHD9-210ENST00000564582 CRTAMO95727 393 aa6.3□□□□□ -1.4
CHD9-210ENST00000564582 ATF2P15336 505 aa6.3□□□□□ -1.4
CHD9-210ENST00000564582 CHMLP26374 656 aa6.3□□□□□ -1.4
CHD9-210ENST00000564582 CFPP27918 469 aa6.3□□□□□ -1.4
CHD9-210ENST00000564582 OAS2P29728 719 aaKnown RBP6.3□□□□□ -1.4
CHD9-210ENST00000564582 ARHGAP25P42331 645 aa6.3□□□□□ -1.4
CHD9-210ENST00000564582 LIMS1P48059 325 aa6.3□□□□□ -1.4
CHD9-210ENST00000564582 HNRNPMP52272 730 aaKnown RBP eCLIP6.3□□□□□ -1.4
CHD9-210ENST00000564582 NKX3-2P78367 333 aa6.3□□□□□ -1.4
CHD9-210ENST00000564582 DRP2Q13474 957 aa6.3□□□□□ -1.4
CHD9-210ENST00000564582 SQSTM1Q13501 440 aa6.3□□□□□ -1.4
CHD9-210ENST00000564582 NEDD9Q14511 834 aa6.3□□□□□ -1.4
CHD9-210ENST00000564582 KRT32Q14532 448 aa6.3□□□□□ -1.4
CHD9-210ENST00000564582 ZKSCAN8Q15776 578 aaPredicted RBP6.3□□□□□ -1.4
CHD9-210ENST00000564582 TWISTNBQ3B726 338 aaPredicted RBP6.3□□□□□ -1.4
CHD9-210ENST00000564582 ANO6Q4KMQ2 910 aa6.3□□□□□ -1.4
CHD9-210ENST00000564582 CT47A1Q5JQC4 288 aaPredicted RBP6.3□□□□□ -1.4
CHD9-210ENST00000564582 CC2D1AQ6P1N0 951 aaPredicted RBP6.3□□□□□ -1.4
CHD9-210ENST00000564582 CCDC73Q6ZRK6 1079 aa6.3□□□□□ -1.4
CHD9-210ENST00000564582 TADA2BQ86TJ2 420 aa6.3□□□□□ -1.4
CHD9-210ENST00000564582 TMEFF1Q8IYR6 380 aa6.3□□□□□ -1.4
CHD9-210ENST00000564582 CNTROBQ8N137 903 aa6.3□□□□□ -1.4
CHD9-210ENST00000564582 GSTCDQ8NEC7 633 aa6.3□□□□□ -1.4
CHD9-210ENST00000564582 SMARCC2Q8TAQ2 1214 aa6.3□□□□□ -1.4
CHD9-210ENST00000564582 UHMK1Q8TAS1 419 aaKnown RBP6.3□□□□□ -1.4
CHD9-210ENST00000564582 TOE1Q96GM8 510 aaKnown RBP6.3□□□□□ -1.4
CHD9-210ENST00000564582 RPGRIP1Q96KN7 1286 aa6.3□□□□□ -1.4
CHD9-210ENST00000564582 PWWP2AQ96N64 755 aa6.3□□□□□ -1.4
CHD9-210ENST00000564582 ZNF396Q96N95 335 aaPredicted RBP6.3□□□□□ -1.4
CHD9-210ENST00000564582 CATSPERZQ9NTU4 200 aa6.3□□□□□ -1.4
CHD9-210ENST00000564582 DTLQ9NZJ0 730 aa6.3□□□□□ -1.4
CHD9-210ENST00000564582 MYO1AQ9UBC5 1043 aa6.3□□□□□ -1.4
CHD9-210ENST00000564582 ASH2LQ9UBL3 628 aa6.3□□□□□ -1.4
CHD9-210ENST00000564582 DSEQ9UL01 958 aa6.3□□□□□ -1.4
CHD9-210ENST00000564582 PLA2G2DQ9UNK4 145 aa6.3□□□□□ -1.4
CHD9-210ENST00000564582 CNPY2Q9Y2B0 182 aa6.3□□□□□ -1.4
CHD9-210ENST00000564582 PMF1-BGLAPU3KQ54 211 aa6.3□□□□□ -1.4
CHD9-210ENST00000564582 CDC42BPGQ6DT37 1551 aa6.3□□□□□ -1.4
CHD9-210ENST00000564582 AATKQ6ZMQ8 1374 aa6.3□□□□□ -1.4
CHD9-210ENST00000564582 PPRC1Q5VV67 1664 aaKnown RBP6.3□□□□□ -1.4
CHD9-210ENST00000564582 CDK12Q9NYV4 1490 aaPredicted RBP6.29□□□□□ -1.4
CHD9-210ENST00000564582 PREX2Q70Z35 1606 aa6.29□□□□□ -1.4
CHD9-210ENST00000564582 MAP3K4Q9Y6R4 1608 aa6.29□□□□□ -1.4
CHD9-210ENST00000564582 A0A1B0GUA9 196 aa6.29□□□□□ -1.4
CHD9-210ENST00000564582 TCRBV5S2A0A599 114 aa6.29□□□□□ -1.4
CHD9-210ENST00000564582 SHTN1A0MZ66 631 aa6.29□□□□□ -1.4
CHD9-210ENST00000564582 SRRM3A6NNA2 597 aaPredicted RBP6.29□□□□□ -1.4
CHD9-210ENST00000564582 EIF3CLB5ME19 914 aaKnown RBP6.29□□□□□ -1.4
CHD9-210ENST00000564582 EBAG9O00559 213 aa6.29□□□□□ -1.4
CHD9-210ENST00000564582 IKBKBO14920 756 aa6.29□□□□□ -1.4
CHD9-210ENST00000564582 FIBPO43427 364 aa6.29□□□□□ -1.4
CHD9-210ENST00000564582 KCNQ2O43526 872 aa6.29□□□□□ -1.4
CHD9-210ENST00000564582 KINO60870 393 aaKnown RBP6.29□□□□□ -1.4
CHD9-210ENST00000564582 GNAI2P04899 355 aa6.29□□□□□ -1.4
CHD9-210ENST00000564582 MC3RP41968 323 aa6.29□□□□□ -1.4
CHD9-210ENST00000564582 LMAN1P49257 510 aa6.29□□□□□ -1.4
CHD9-210ENST00000564582 AFF3P51826 1226 aaKnown RBP6.29□□□□□ -1.4
CHD9-210ENST00000564582 SARNPP82979 210 aaKnown RBP6.29□□□□□ -1.4
CHD9-210ENST00000564582 CAP1Q01518 475 aa6.29□□□□□ -1.4
CHD9-210ENST00000564582 PLCB4Q15147 1175 aa6.29□□□□□ -1.4
CHD9-210ENST00000564582 TCEA2Q15560 299 aa6.29□□□□□ -1.4
CHD9-210ENST00000564582 CRY1Q16526 586 aa6.29□□□□□ -1.4
CHD9-210ENST00000564582 ERCC6LQ2NKX8 1250 aa6.29□□□□□ -1.4
CHD9-210ENST00000564582 FNDC3BQ53EP0 1204 aaKnown RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms