RNA–Protein interactions for RNA: ENST00000564111.5

SNX29-203, Transcript of sorting nexin 29, humanhuman

TSL 2

Gene SNX29, Length 2,248 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-203ENST00000564111 NOTUMQ6P988 496 aa16.47■□□□□ 0.23
SNX29-203ENST00000564111 ZBTB8OSQ8IWT0 167 aa16.47■□□□□ 0.23
SNX29-203ENST00000564111 RNF149Q8NC42 400 aa16.47■□□□□ 0.23
SNX29-203ENST00000564111 POF1BQ8WVV4 589 aa16.47■□□□□ 0.23
SNX29-203ENST00000564111 MRPS27Q92552 414 aaKnown RBP16.47■□□□□ 0.23
SNX29-203ENST00000564111 RNF19AQ9NV58 838 aa16.47■□□□□ 0.23
SNX29-203ENST00000564111 TYW1Q9NV66 732 aaKnown RBP16.47■□□□□ 0.23
SNX29-203ENST00000564111 POTEMA6NI47 508 aa16.46■□□□□ 0.23
SNX29-203ENST00000564111 FGF18O76093 207 aa16.46■□□□□ 0.23
SNX29-203ENST00000564111 IBSPP21815 317 aaPredicted RBP16.46■□□□□ 0.23
SNX29-203ENST00000564111 ARL2P36404 184 aa16.46■□□□□ 0.23
SNX29-203ENST00000564111 APBB1IPQ7Z5R6 666 aaPredicted RBP16.46■□□□□ 0.23
SNX29-203ENST00000564111 PRIMPOLQ96LW4 560 aa16.46■□□□□ 0.23
SNX29-203ENST00000564111 NGRNQ9NPE2 291 aaKnown RBP16.46■□□□□ 0.23
SNX29-203ENST00000564111 PRKAG3Q9UGI9 489 aa16.46■□□□□ 0.23
SNX29-203ENST00000564111 TRANK1O15050 2925 aa16.46■□□□□ 0.23
SNX29-203ENST00000564111 SRGAP2CP0DJJ0 459 aa16.46■□□□□ 0.23
SNX29-203ENST00000564111 TECP42680 631 aa16.46■□□□□ 0.23
SNX29-203ENST00000564111 GATMP50440 423 aa16.46■□□□□ 0.23
SNX29-203ENST00000564111 GIT2Q14161 759 aa16.46■□□□□ 0.23
SNX29-203ENST00000564111 MRPL10Q7Z7H8 261 aaKnown RBP16.46■□□□□ 0.23
SNX29-203ENST00000564111 EFHBQ8N7U6 833 aa16.46■□□□□ 0.23
SNX29-203ENST00000564111 RNF169Q8NCN4 708 aa16.46■□□□□ 0.23
SNX29-203ENST00000564111 XPNPEP1Q9NQW7 623 aa16.46■□□□□ 0.23
SNX29-203ENST00000564111 LRWD1Q9UFC0 647 aa16.46■□□□□ 0.23
SNX29-203ENST00000564111 NCLP19338 710 aaKnown RBP16.45■□□□□ 0.22
SNX29-203ENST00000564111 PDCP20941 246 aa16.45■□□□□ 0.22
SNX29-203ENST00000564111 NOMO2Q5JPE7 1267 aa16.45■□□□□ 0.22
SNX29-203ENST00000564111 KCNT2Q6UVM3 1135 aa16.45■□□□□ 0.22
SNX29-203ENST00000564111 ZNF668Q96K58 619 aaPredicted RBP16.45■□□□□ 0.22
SNX29-203ENST00000564111 SH2D3AQ9BRG2 576 aa16.45■□□□□ 0.22
SNX29-203ENST00000564111 TIPINQ9BVW5 301 aa16.45■□□□□ 0.22
SNX29-203ENST00000564111 POLR3FQ9H1D9 316 aaPredicted RBP16.45■□□□□ 0.22
SNX29-203ENST00000564111 PRMT7Q9NVM4 692 aaPredicted RBP16.45■□□□□ 0.22
SNX29-203ENST00000564111 KCNG1Q9UIX4 513 aa16.45■□□□□ 0.22
SNX29-203ENST00000564111 FSCN2O14926 492 aa16.45■□□□□ 0.22
SNX29-203ENST00000564111 DTNBO60941 627 aa16.45■□□□□ 0.22
SNX29-203ENST00000564111 SPATA31C1P0DKV0 1188 aa16.45■□□□□ 0.22
SNX29-203ENST00000564111 FGFR4P22455 802 aa16.45■□□□□ 0.22
SNX29-203ENST00000564111 KCNA5P22460 613 aa16.45■□□□□ 0.22
SNX29-203ENST00000564111 GJB2P29033 226 aa16.45■□□□□ 0.22
SNX29-203ENST00000564111 CCT6AP40227 531 aaKnown RBP16.45■□□□□ 0.22
SNX29-203ENST00000564111 TFF2Q03403 129 aa16.45■□□□□ 0.22
SNX29-203ENST00000564111 CTC1Q2NKJ3 1217 aa16.45■□□□□ 0.22
SNX29-203ENST00000564111 CLLU1OSQ5K130 101 aa16.45■□□□□ 0.22
SNX29-203ENST00000564111 KRT79Q5XKE5 535 aa16.45■□□□□ 0.22
SNX29-203ENST00000564111 PPP4R3CPQ6ZMV5 832 aa16.45■□□□□ 0.22
SNX29-203ENST00000564111 CATSPER3Q86XQ3 398 aa16.45■□□□□ 0.22
SNX29-203ENST00000564111 ZNF579Q8NAF0 562 aaKnown RBP16.45■□□□□ 0.22
SNX29-203ENST00000564111 TMEM175Q9BSA9 504 aa16.45■□□□□ 0.22
SNX29-203ENST00000564111 ALG13Q9NP73 1137 aaKnown RBP16.45■□□□□ 0.22
SNX29-203ENST00000564111 PCDHB2Q9Y5E7 798 aa16.45■□□□□ 0.22
SNX29-203ENST00000564111 WNT7AO00755 349 aa16.44■□□□□ 0.22
SNX29-203ENST00000564111 USO1O60763 962 aaKnown RBP16.44■□□□□ 0.22
SNX29-203ENST00000564111 ATF7P17544 494 aaPredicted RBP16.44■□□□□ 0.22
SNX29-203ENST00000564111 HYAL1Q12794 435 aa16.44■□□□□ 0.22
SNX29-203ENST00000564111 DTHD1Q6ZMT9 781 aa16.44■□□□□ 0.22
SNX29-203ENST00000564111 BRAPQ7Z569 592 aa16.44■□□□□ 0.22
SNX29-203ENST00000564111 KSR1Q8IVT5 923 aa16.44■□□□□ 0.22
SNX29-203ENST00000564111 HELQQ8TDG4 1101 aa16.44■□□□□ 0.22
SNX29-203ENST00000564111 KIFAP3Q92845 792 aa16.44■□□□□ 0.22
SNX29-203ENST00000564111 POP1Q99575 1024 aaKnown RBP16.44■□□□□ 0.22
SNX29-203ENST00000564111 CLDND1Q9NY35 253 aa16.44■□□□□ 0.22
SNX29-203ENST00000564111 MED24O75448 989 aa16.43■□□□□ 0.22
SNX29-203ENST00000564111 CYP11B2P19099 503 aa16.43■□□□□ 0.22
SNX29-203ENST00000564111 ALDH7A1P49419 539 aaKnown RBP16.43■□□□□ 0.22
SNX29-203ENST00000564111 SMAD4Q13485 552 aaKnown RBP16.43■□□□□ 0.22
SNX29-203ENST00000564111 CAPSQ13938 189 aa16.43■□□□□ 0.22
SNX29-203ENST00000564111 ARL6IP4Q66PJ3 421 aaKnown RBP16.43■□□□□ 0.22
SNX29-203ENST00000564111 MCTP1Q6DN14 999 aa16.43■□□□□ 0.22
SNX29-203ENST00000564111 PTCRAQ6ISU1 281 aaPredicted RBP16.43■□□□□ 0.22
SNX29-203ENST00000564111 C4orf32Q8N8J7 132 aa16.43■□□□□ 0.22
SNX29-203ENST00000564111 IGSF22Q8N9C0 903 aa16.43■□□□□ 0.22
SNX29-203ENST00000564111 IFT74Q96LB3 600 aa16.43■□□□□ 0.22
SNX29-203ENST00000564111 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.43■□□□□ 0.22
SNX29-203ENST00000564111 INO80B-WBP1J3KQ70 363 aa16.43■□□□□ 0.22
SNX29-203ENST00000564111 INPPL1O15357 1258 aa16.43■□□□□ 0.22
SNX29-203ENST00000564111 KCNQ1P51787 676 aa16.43■□□□□ 0.22
SNX29-203ENST00000564111 PTGDRQ13258 359 aa16.43■□□□□ 0.22
SNX29-203ENST00000564111 SMC1AQ14683 1233 aaKnown RBP16.43■□□□□ 0.22
SNX29-203ENST00000564111 FAM187BQ17R55 369 aa16.43■□□□□ 0.22
SNX29-203ENST00000564111 CDCA2Q69YH5 1023 aaPredicted RBP16.43■□□□□ 0.22
SNX29-203ENST00000564111 SLC39A11Q8N1S5 342 aa16.43■□□□□ 0.22
SNX29-203ENST00000564111 TMEM169Q96HH4 297 aa16.43■□□□□ 0.22
SNX29-203ENST00000564111 CSRNP2Q9H175 543 aa16.43■□□□□ 0.22
SNX29-203ENST00000564111 RSAD1Q9HA92 442 aa16.43■□□□□ 0.22
SNX29-203ENST00000564111 CD207Q9UJ71 328 aa16.43■□□□□ 0.22
SNX29-203ENST00000564111 GRXCR2A6NFK2 248 aa16.42■□□□□ 0.22
SNX29-203ENST00000564111 N4BP3O15049 544 aa16.42■□□□□ 0.22
SNX29-203ENST00000564111 TSPAN1O60635 241 aa16.42■□□□□ 0.22
SNX29-203ENST00000564111 ITGA4P13612 1032 aa16.42■□□□□ 0.22
SNX29-203ENST00000564111 GLRA2P23416 452 aa16.42■□□□□ 0.22
SNX29-203ENST00000564111 NAMPTP43490 491 aa16.42■□□□□ 0.22
SNX29-203ENST00000564111 EFNA5P52803 228 aa16.42■□□□□ 0.22
SNX29-203ENST00000564111 RNASELQ05823 741 aaKnown RBP16.42■□□□□ 0.22
SNX29-203ENST00000564111 MBTD1Q05BQ5 628 aa16.42■□□□□ 0.22
SNX29-203ENST00000564111 PADI6Q6TGC4 694 aa16.42■□□□□ 0.22
SNX29-203ENST00000564111 ASAP3Q8TDY4 903 aa16.42■□□□□ 0.22
SNX29-203ENST00000564111 SNX29Q8TEQ0 813 aa16.42■□□□□ 0.22
SNX29-203ENST00000564111 PIGOQ8TEQ8 1089 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms