RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 KANSL3Q9P2N6 904 aa10.68□□□□□ -0.7
CLN6-203ENST00000563917 INPP5FQ9Y2H2 1132 aa10.68□□□□□ -0.7
CLN6-203ENST00000563917 NR2E1Q9Y466 385 aa10.68□□□□□ -0.7
CLN6-203ENST00000563917 WDR81Q562E7 1941 aa10.68□□□□□ -0.7
CLN6-203ENST00000563917 ATG2AQ2TAZ0 1938 aa10.67□□□□□ -0.7
CLN6-203ENST00000563917 ERLIN2O94905 339 aa10.67□□□□□ -0.7
CLN6-203ENST00000563917 CXCL14O95715 111 aa10.67□□□□□ -0.7
CLN6-203ENST00000563917 SRGAP2CP0DJJ0 459 aa10.67□□□□□ -0.7
CLN6-203ENST00000563917 YWHABP31946 246 aaKnown RBP10.67□□□□□ -0.7
CLN6-203ENST00000563917 PBX3P40426 434 aa10.67□□□□□ -0.7
CLN6-203ENST00000563917 TFDP1Q14186 410 aa10.67□□□□□ -0.7
CLN6-203ENST00000563917 CBX2Q14781 532 aaPredicted RBP10.67□□□□□ -0.7
CLN6-203ENST00000563917 PCBP1Q15365 356 aaKnown RBP eCLIP10.67□□□□□ -0.7
CLN6-203ENST00000563917 SAFBQ15424 915 aaKnown RBP eCLIP10.67□□□□□ -0.7
CLN6-203ENST00000563917 NPY5RQ15761 445 aa10.67□□□□□ -0.7
CLN6-203ENST00000563917 LONRF3Q496Y0 759 aa10.67□□□□□ -0.7
CLN6-203ENST00000563917 XKR9Q5GH70 373 aa10.67□□□□□ -0.7
CLN6-203ENST00000563917 NOMO2Q5JPE7 1267 aa10.67□□□□□ -0.7
CLN6-203ENST00000563917 ANKRD54Q6NXT1 300 aa10.67□□□□□ -0.7
CLN6-203ENST00000563917 TMEM184AQ6ZMB5 413 aa10.67□□□□□ -0.7
CLN6-203ENST00000563917 ZNF598Q86UK7 904 aaKnown RBP10.67□□□□□ -0.7
CLN6-203ENST00000563917 TPH2Q8IWU9 490 aa10.67□□□□□ -0.7
CLN6-203ENST00000563917 SUGP1Q8IWZ8 645 aaKnown RBP10.67□□□□□ -0.7
CLN6-203ENST00000563917 C4orf19Q8IY42 314 aa10.67□□□□□ -0.7
CLN6-203ENST00000563917 HACE1Q8IYU2 909 aa10.67□□□□□ -0.7
CLN6-203ENST00000563917 SLC39A11Q8N1S5 342 aa10.67□□□□□ -0.7
CLN6-203ENST00000563917 MRPL43Q8N983 215 aaKnown RBP10.67□□□□□ -0.7
CLN6-203ENST00000563917 CNNM3Q8NE01 707 aa10.67□□□□□ -0.7
CLN6-203ENST00000563917 PRPF31Q8WWY3 499 aaKnown RBP10.67□□□□□ -0.7
CLN6-203ENST00000563917 NECTIN4Q96NY8 510 aa10.67□□□□□ -0.7
CLN6-203ENST00000563917 MTRQ99707 1265 aa10.67□□□□□ -0.7
CLN6-203ENST00000563917 GBP3Q9H0R5 595 aa10.67□□□□□ -0.7
CLN6-203ENST00000563917 UBN1Q9NPG3 1134 aa10.67□□□□□ -0.7
CLN6-203ENST00000563917 RNF19AQ9NV58 838 aa10.67□□□□□ -0.7
CLN6-203ENST00000563917 TPCN1Q9ULQ1 816 aa10.67□□□□□ -0.7
CLN6-203ENST00000563917 PCDHA12Q9UN75 941 aa10.67□□□□□ -0.7
CLN6-203ENST00000563917 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.66□□□□□ -0.7
CLN6-203ENST00000563917 HIDE1A8MVS5 230 aa10.66□□□□□ -0.7
CLN6-203ENST00000563917 LOC730098B7Z3J9 87 aa10.66□□□□□ -0.7
CLN6-203ENST00000563917 NT5C1B-RDH14C9J2C7 533 aa10.66□□□□□ -0.7
CLN6-203ENST00000563917 EML1O00423 815 aa10.66□□□□□ -0.7
CLN6-203ENST00000563917 ZNF623O75123 536 aa10.66□□□□□ -0.7
CLN6-203ENST00000563917 NR1I2O75469 434 aa10.66□□□□□ -0.7
CLN6-203ENST00000563917 AK2P54819 239 aa10.66□□□□□ -0.7
CLN6-203ENST00000563917 NPEPPSP55786 919 aa10.66□□□□□ -0.7
CLN6-203ENST00000563917 CYP4A11Q02928 519 aa10.66□□□□□ -0.7
CLN6-203ENST00000563917 ITIH3Q06033 890 aa10.66□□□□□ -0.7
CLN6-203ENST00000563917 LAMTOR4Q0VGL1 99 aa10.66□□□□□ -0.7
CLN6-203ENST00000563917 MXD4Q14582 209 aaPredicted RBP10.66□□□□□ -0.7
CLN6-203ENST00000563917 CALCRLQ16602 461 aa10.66□□□□□ -0.7
CLN6-203ENST00000563917 ELMSAN1Q6PJG2 1045 aa10.66□□□□□ -0.7
CLN6-203ENST00000563917 POTEDQ86YR6 584 aa10.66□□□□□ -0.7
CLN6-203ENST00000563917 KSR1Q8IVT5 923 aa10.66□□□□□ -0.7
CLN6-203ENST00000563917 VPS52Q8N1B4 723 aa10.66□□□□□ -0.7
CLN6-203ENST00000563917 RNF149Q8NC42 400 aa10.66□□□□□ -0.7
CLN6-203ENST00000563917 LPPQ93052 612 aa10.66□□□□□ -0.7
CLN6-203ENST00000563917 TMEM143Q96AN5 459 aa10.66□□□□□ -0.7
CLN6-203ENST00000563917 PBXIP1Q96AQ6 731 aa10.66□□□□□ -0.7
CLN6-203ENST00000563917 DYDC2Q96IM9 177 aa10.66□□□□□ -0.7
CLN6-203ENST00000563917 RIPOR3Q96MK2 946 aa10.66□□□□□ -0.7
CLN6-203ENST00000563917 APOL5Q9BWW9 433 aa10.66□□□□□ -0.7
CLN6-203ENST00000563917 RSAD1Q9HA92 442 aa10.66□□□□□ -0.7
CLN6-203ENST00000563917 TSHZ2Q9NRE2 1034 aa10.66□□□□□ -0.7
CLN6-203ENST00000563917 BMP2KQ9NSY1 1161 aaPredicted RBP10.66□□□□□ -0.7
CLN6-203ENST00000563917 AGPAT5Q9NUQ2 364 aa10.66□□□□□ -0.7
CLN6-203ENST00000563917 DZANK1Q9NVP4 752 aa10.66□□□□□ -0.7
CLN6-203ENST00000563917 VAV3Q9UKW4 847 aa10.66□□□□□ -0.7
CLN6-203ENST00000563917 PCDHB2Q9Y5E7 798 aa10.66□□□□□ -0.7
CLN6-203ENST00000563917 CNTNAP2Q9UHC6 1331 aa10.65□□□□□ -0.7
CLN6-203ENST00000563917 C2orf71A6NGG8 1288 aa10.65□□□□□ -0.7
CLN6-203ENST00000563917 STBD1O95210 358 aa10.65□□□□□ -0.7
CLN6-203ENST00000563917 ALDH2P05091 517 aa10.65□□□□□ -0.7
CLN6-203ENST00000563917 AXLP30530 894 aa10.65□□□□□ -0.7
CLN6-203ENST00000563917 MTHFRP42898 656 aa10.65□□□□□ -0.7
CLN6-203ENST00000563917 NEK4P51957 841 aa10.65□□□□□ -0.7
CLN6-203ENST00000563917 ZXDAP98168 799 aa10.65□□□□□ -0.7
CLN6-203ENST00000563917 CTTNQ14247 550 aaKnown RBP10.65□□□□□ -0.7
CLN6-203ENST00000563917 EMC2Q15006 297 aa10.65□□□□□ -0.7
CLN6-203ENST00000563917 ERICH6BQ5W0A0 696 aa10.65□□□□□ -0.7
CLN6-203ENST00000563917 NOTUMQ6P988 496 aa10.65□□□□□ -0.7
CLN6-203ENST00000563917 TRIM67Q6ZTA4 783 aa10.65□□□□□ -0.7
CLN6-203ENST00000563917 PPFIBP1Q86W92 1011 aa10.65□□□□□ -0.7
CLN6-203ENST00000563917 OXER1Q8TDS5 423 aa10.65□□□□□ -0.7
CLN6-203ENST00000563917 SUSD6Q92537 303 aa10.65□□□□□ -0.7
CLN6-203ENST00000563917 HAS1Q92839 578 aa10.65□□□□□ -0.7
CLN6-203ENST00000563917 IGSF21Q96ID5 467 aa10.65□□□□□ -0.7
CLN6-203ENST00000563917 CEP89Q96ST8 783 aa10.65□□□□□ -0.7
CLN6-203ENST00000563917 PRRX2Q99811 253 aa10.65□□□□□ -0.7
CLN6-203ENST00000563917 EMILIN2Q9BXX0 1053 aa10.65□□□□□ -0.7
CLN6-203ENST00000563917 TRIM6Q9C030 488 aaPredicted RBP10.65□□□□□ -0.7
CLN6-203ENST00000563917 DHX33Q9H6R0 707 aaKnown RBP10.65□□□□□ -0.7
CLN6-203ENST00000563917 TBC1D13Q9NVG8 400 aa10.65□□□□□ -0.7
CLN6-203ENST00000563917 RGL1Q9NZL6 768 aa10.65□□□□□ -0.7
CLN6-203ENST00000563917 HCFC2Q9Y5Z7 792 aa10.65□□□□□ -0.7
CLN6-203ENST00000563917 TMEM221A6NGB7 291 aa10.64□□□□□ -0.71
CLN6-203ENST00000563917 INO80B-WBP1J3KQ70 363 aa10.64□□□□□ -0.71
CLN6-203ENST00000563917 M0R296 226 aa10.64□□□□□ -0.71
CLN6-203ENST00000563917 NEMFO60524 1076 aa10.64□□□□□ -0.71
CLN6-203ENST00000563917 OFD1O75665 1012 aa10.64□□□□□ -0.71
CLN6-203ENST00000563917 DGAT1O75907 488 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms