RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 IRX4P78413 519 aa12.52□□□□□ -0.41
HDGFL3-204ENST00000563790 FAM189BP81408 668 aa12.52□□□□□ -0.41
HDGFL3-204ENST00000563790 ELF2Q15723 593 aa12.52□□□□□ -0.41
HDGFL3-204ENST00000563790 IER5Q5VY09 327 aa12.52□□□□□ -0.41
HDGFL3-204ENST00000563790 TMEM173Q86WV6 379 aaPredicted RBP12.52□□□□□ -0.41
HDGFL3-204ENST00000563790 LCORLQ8N3X6 602 aa12.52□□□□□ -0.41
HDGFL3-204ENST00000563790 FAM3CQ92520 227 aa12.52□□□□□ -0.41
HDGFL3-204ENST00000563790 PHF12Q96QT6 1004 aa12.52□□□□□ -0.41
HDGFL3-204ENST00000563790 NT5C3AQ9H0P0 336 aa12.52□□□□□ -0.41
HDGFL3-204ENST00000563790 CABIN1Q9Y6J0 2220 aa12.52□□□□□ -0.41
HDGFL3-204ENST00000563790 PTPRDP23468 1912 aa12.51□□□□□ -0.41
HDGFL3-204ENST00000563790 DENND3A2RUS2 1198 aa12.51□□□□□ -0.41
HDGFL3-204ENST00000563790 MBLAC1A4D2B0 266 aaPredicted RBP12.51□□□□□ -0.41
HDGFL3-204ENST00000563790 SORBS3O60504 671 aa12.51□□□□□ -0.41
HDGFL3-204ENST00000563790 EIF3JO75822 258 aaKnown RBP12.51□□□□□ -0.41
HDGFL3-204ENST00000563790 RHOBTB1O94844 696 aa12.51□□□□□ -0.41
HDGFL3-204ENST00000563790 UBTFL1P0CB47 393 aaPredicted RBP12.51□□□□□ -0.41
HDGFL3-204ENST00000563790 ADSSP30520 456 aa12.51□□□□□ -0.41
HDGFL3-204ENST00000563790 BCAR1P56945 870 aa12.51□□□□□ -0.41
HDGFL3-204ENST00000563790 EXOSC9Q06265 439 aaKnown RBP12.51□□□□□ -0.41
HDGFL3-204ENST00000563790 PRICKLE2Q7Z3G6 844 aa12.51□□□□□ -0.41
HDGFL3-204ENST00000563790 NSUN6Q8TEA1 469 aaKnown RBP12.51□□□□□ -0.41
HDGFL3-204ENST00000563790 DBNDD2Q9BQY9 259 aa12.51□□□□□ -0.41
HDGFL3-204ENST00000563790 TRIM4Q9C037 500 aa12.51□□□□□ -0.41
HDGFL3-204ENST00000563790 TUBE1Q9UJT0 475 aa12.51□□□□□ -0.41
HDGFL3-204ENST00000563790 TRPV2Q9Y5S1 764 aa12.51□□□□□ -0.41
HDGFL3-204ENST00000563790 CCDC171Q6TFL3 1326 aa12.51□□□□□ -0.41
HDGFL3-204ENST00000563790 TRABD2BA6NFA1 517 aa12.5□□□□□ -0.41
HDGFL3-204ENST00000563790 PATE3B3GLJ2 98 aa12.5□□□□□ -0.41
HDGFL3-204ENST00000563790 TERTO14746 1132 aaKnown RBP12.5□□□□□ -0.41
HDGFL3-204ENST00000563790 MCCP23508 829 aa12.5□□□□□ -0.41
HDGFL3-204ENST00000563790 LMAN2Q12907 356 aa12.5□□□□□ -0.41
HDGFL3-204ENST00000563790 RCSD1Q6JBY9 416 aa12.5□□□□□ -0.41
HDGFL3-204ENST00000563790 KCNV1Q6PIU1 500 aa12.5□□□□□ -0.41
HDGFL3-204ENST00000563790 KCTD1Q719H9 257 aa12.5□□□□□ -0.41
HDGFL3-204ENST00000563790 HDAC7Q8WUI4 952 aa12.5□□□□□ -0.41
HDGFL3-204ENST00000563790 FGF13Q92913 245 aa12.5□□□□□ -0.41
HDGFL3-204ENST00000563790 PCDH15Q96QU1 1955 aa12.49□□□□□ -0.41
HDGFL3-204ENST00000563790 KDM3AQ9Y4C1 1321 aa12.49□□□□□ -0.41
HDGFL3-204ENST00000563790 PRKAB2O43741 272 aa12.49□□□□□ -0.41
HDGFL3-204ENST00000563790 FTH1P19P0C7X4 201 aa12.49□□□□□ -0.41
HDGFL3-204ENST00000563790 ELAVL4P26378 380 aaKnown RBP12.49□□□□□ -0.41
HDGFL3-204ENST00000563790 EIF2S3P41091 472 aaKnown RBP12.49□□□□□ -0.41
HDGFL3-204ENST00000563790 NFX1Q12986 1120 aaKnown RBP12.49□□□□□ -0.41
HDGFL3-204ENST00000563790 LRRC32Q14392 662 aa12.49□□□□□ -0.41
HDGFL3-204ENST00000563790 TMEM266Q2M3C6 531 aa12.49□□□□□ -0.41
HDGFL3-204ENST00000563790 LRRC69Q6ZNQ3 347 aa12.49□□□□□ -0.41
HDGFL3-204ENST00000563790 Q6ZS52 159 aa12.49□□□□□ -0.41
HDGFL3-204ENST00000563790 ZNF280BQ86YH2 543 aa12.49□□□□□ -0.41
HDGFL3-204ENST00000563790 RGS22Q8NE09 1264 aa12.49□□□□□ -0.41
HDGFL3-204ENST00000563790 NANOS1Q8WY41 292 aaKnown RBP12.49□□□□□ -0.41
HDGFL3-204ENST00000563790 IGSF21Q96ID5 467 aa12.49□□□□□ -0.41
HDGFL3-204ENST00000563790 VN1R3Q9BXE9 311 aa12.49□□□□□ -0.41
HDGFL3-204ENST00000563790 PRKD2Q9BZL6 878 aa12.49□□□□□ -0.41
HDGFL3-204ENST00000563790 ANTXR1Q9H6X2 564 aa12.49□□□□□ -0.41
HDGFL3-204ENST00000563790 ZDHHC7Q9NXF8 308 aa12.49□□□□□ -0.41
HDGFL3-204ENST00000563790 ZNF215Q9UL58 517 aaPredicted RBP12.49□□□□□ -0.41
HDGFL3-204ENST00000563790 HELZP42694 1942 aaKnown RBP12.49□□□□□ -0.41
HDGFL3-204ENST00000563790 MYLKQ15746 1914 aa12.49□□□□□ -0.41
HDGFL3-204ENST00000563790 RP1L1Q8IWN7 2480 aaPredicted RBP12.48□□□□□ -0.41
HDGFL3-204ENST00000563790 M0QZ92 97 aa12.48□□□□□ -0.41
HDGFL3-204ENST00000563790 ECI2O75521 394 aa12.48□□□□□ -0.41
HDGFL3-204ENST00000563790 GLUD1P00367 558 aa12.48□□□□□ -0.41
HDGFL3-204ENST00000563790 UBA1P22314 1058 aaKnown RBP12.48□□□□□ -0.41
HDGFL3-204ENST00000563790 SP2Q02086 613 aa12.48□□□□□ -0.41
HDGFL3-204ENST00000563790 TRIM50Q86XT4 487 aa12.48□□□□□ -0.41
HDGFL3-204ENST00000563790 ABI1Q8IZP0 508 aa12.48□□□□□ -0.41
HDGFL3-204ENST00000563790 PNPLA1Q8N8W4 532 aa12.48□□□□□ -0.41
HDGFL3-204ENST00000563790 PSMG3-AS1Q96PY0 264 aa12.48□□□□□ -0.41
HDGFL3-204ENST00000563790 TAAR1Q96RJ0 339 aa12.48□□□□□ -0.41
HDGFL3-204ENST00000563790 EVLQ9UI08 416 aaPredicted RBP12.48□□□□□ -0.41
HDGFL3-204ENST00000563790 PNMA2Q9UL42 364 aa12.48□□□□□ -0.41
HDGFL3-204ENST00000563790 ZBED9Q6R2W3 1325 aa12.47□□□□□ -0.41
HDGFL3-204ENST00000563790 CARNS1A5YM72 827 aa12.47□□□□□ -0.41
HDGFL3-204ENST00000563790 PDE6AP16499 860 aa12.47□□□□□ -0.41
HDGFL3-204ENST00000563790 PXNP49023 591 aaPredicted RBP12.47□□□□□ -0.41
HDGFL3-204ENST00000563790 RHDQ02161 417 aa12.47□□□□□ -0.41
HDGFL3-204ENST00000563790 TMPRSS7Q7RTY8 843 aa12.47□□□□□ -0.41
HDGFL3-204ENST00000563790 CELF4Q9BZC1 486 aaKnown RBP12.47□□□□□ -0.41
HDGFL3-204ENST00000563790 MAF1Q9H063 256 aa12.47□□□□□ -0.41
HDGFL3-204ENST00000563790 MLXIPQ9HAP2 919 aa12.47□□□□□ -0.41
HDGFL3-204ENST00000563790 POLMQ9NP87 494 aaPredicted RBP12.47□□□□□ -0.41
HDGFL3-204ENST00000563790 APCP25054 2843 aa12.47□□□□□ -0.41
HDGFL3-204ENST00000563790 FRMPD4Q14CM0 1322 aa12.46□□□□□ -0.41
HDGFL3-204ENST00000563790 ADH1AP07327 375 aa12.46□□□□□ -0.41
HDGFL3-204ENST00000563790 MAPK8P45983 427 aa12.46□□□□□ -0.41
HDGFL3-204ENST00000563790 CAMK2BQ13554 666 aa12.46□□□□□ -0.41
HDGFL3-204ENST00000563790 TRIP6Q15654 476 aaKnown RBP12.46□□□□□ -0.41
HDGFL3-204ENST00000563790 MARCH8Q5T0T0 291 aa12.46□□□□□ -0.41
HDGFL3-204ENST00000563790 CTR9Q6PD62 1173 aa12.46□□□□□ -0.41
HDGFL3-204ENST00000563790 TOGARAM2Q6ZUX3 1019 aa12.46□□□□□ -0.41
HDGFL3-204ENST00000563790 WWC1Q8IX03 1113 aa12.46□□□□□ -0.41
HDGFL3-204ENST00000563790 BCL7CQ8WUZ0 217 aaPredicted RBP12.46□□□□□ -0.41
HDGFL3-204ENST00000563790 CHMP4CQ96CF2 233 aa12.46□□□□□ -0.41
HDGFL3-204ENST00000563790 MED8Q96G25 268 aa12.46□□□□□ -0.41
HDGFL3-204ENST00000563790 RMDN3Q96TC7 470 aa12.46□□□□□ -0.41
HDGFL3-204ENST00000563790 PLA2G2FQ9BZM2 168 aa12.46□□□□□ -0.41
HDGFL3-204ENST00000563790 FZD8Q9H461 694 aa12.46□□□□□ -0.41
HDGFL3-204ENST00000563790 PLEKHA4Q9H4M7 779 aa12.46□□□□□ -0.41
HDGFL3-204ENST00000563790 ARMT1Q9H993 441 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms