RNA–Protein interactions for RNA: ENST00000563783.5

SPG7-208, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-208ENST00000563783 ALADP13716 330 aa28.09■■■□□ 2.09
SPG7-208ENST00000563783 SSTR3P32745 418 aaPredicted RBP28.09■■■□□ 2.09
SPG7-208ENST00000563783 LAMTOR4Q0VGL1 99 aa28.09■■■□□ 2.09
SPG7-208ENST00000563783 DUSP6Q16828 381 aa28.09■■■□□ 2.09
SPG7-208ENST00000563783 XKR9Q5GH70 373 aa28.09■■■□□ 2.09
SPG7-208ENST00000563783 TMEM184AQ6ZMB5 413 aa28.09■■■□□ 2.09
SPG7-208ENST00000563783 ZNF579Q8NAF0 562 aaKnown RBP28.09■■■□□ 2.09
SPG7-208ENST00000563783 MICAL1Q8TDZ2 1067 aa28.09■■■□□ 2.09
SPG7-208ENST00000563783 EIF2AK1Q9BQI3 630 aaKnown RBP28.09■■■□□ 2.09
SPG7-208ENST00000563783 SH2B1Q9NRF2 756 aaPredicted RBP28.09■■■□□ 2.09
SPG7-208ENST00000563783 CLEC1BQ9P126 229 aa28.09■■■□□ 2.09
SPG7-208ENST00000563783 DTNBO60941 627 aa28.08■■■□□ 2.09
SPG7-208ENST00000563783 ERVFC1P60507 584 aa28.08■■■□□ 2.09
SPG7-208ENST00000563783 HMGN5P82970 282 aaKnown RBP28.08■■■□□ 2.09
SPG7-208ENST00000563783 GLB1LQ6UWU2 654 aa28.08■■■□□ 2.09
SPG7-208ENST00000563783 FERMT3Q86UX7 667 aa28.08■■■□□ 2.09
SPG7-208ENST00000563783 IFNLR1Q8IU57 520 aaPredicted RBP28.08■■■□□ 2.09
SPG7-208ENST00000563783 KSR1Q8IVT5 923 aa28.08■■■□□ 2.09
SPG7-208ENST00000563783 SLC39A11Q8N1S5 342 aa28.08■■■□□ 2.09
SPG7-208ENST00000563783 RNF169Q8NCN4 708 aa28.08■■■□□ 2.09
SPG7-208ENST00000563783 HELQQ8TDG4 1101 aa28.08■■■□□ 2.09
SPG7-208ENST00000563783 PGBD4Q96DM1 585 aa28.08■■■□□ 2.09
SPG7-208ENST00000563783 MTRQ99707 1265 aa28.08■■■□□ 2.09
SPG7-208ENST00000563783 C5orf42Q9H799 3197 aa28.07■■■□□ 2.08
SPG7-208ENST00000563783 DGAT1O75907 488 aa28.07■■■□□ 2.08
SPG7-208ENST00000563783 GLP2RO95838 553 aa28.07■■■□□ 2.08
SPG7-208ENST00000563783 SRGAP2BP0DMP2 458 aa28.07■■■□□ 2.08
SPG7-208ENST00000563783 CYP4A11Q02928 519 aa28.07■■■□□ 2.08
SPG7-208ENST00000563783 CTTNQ14247 550 aaKnown RBP28.07■■■□□ 2.08
SPG7-208ENST00000563783 TMEM31Q5JXX7 168 aa28.07■■■□□ 2.08
SPG7-208ENST00000563783 TPH2Q8IWU9 490 aa28.07■■■□□ 2.08
SPG7-208ENST00000563783 TMEM143Q96AN5 459 aa28.07■■■□□ 2.08
SPG7-208ENST00000563783 FOXP1Q9H334 677 aaPredicted RBP28.07■■■□□ 2.08
SPG7-208ENST00000563783 ALDH7A1P49419 539 aaKnown RBP28.06■■■□□ 2.08
SPG7-208ENST00000563783 MRPL10Q7Z7H8 261 aaKnown RBP28.06■■■□□ 2.08
SPG7-208ENST00000563783 KHSRPQ92945 711 aaKnown RBP eCLIP28.06■■■□□ 2.08
SPG7-208ENST00000563783 STK39Q9UEW8 545 aa28.06■■■□□ 2.08
SPG7-208ENST00000563783 ARIH1Q9Y4X5 557 aaPredicted RBP28.06■■■□□ 2.08
SPG7-208ENST00000563783 CNTNAP2Q9UHC6 1331 aa28.06■■■□□ 2.08
SPG7-208ENST00000563783 CSPG5O95196 566 aa28.05■■■□□ 2.08
SPG7-208ENST00000563783 AXLP30530 894 aa28.05■■■□□ 2.08
SPG7-208ENST00000563783 KCNC3Q14003 757 aa28.05■■■□□ 2.08
SPG7-208ENST00000563783 BMS1Q14692 1282 aaKnown RBP28.05■■■□□ 2.08
SPG7-208ENST00000563783 CNNM3Q8NE01 707 aa28.05■■■□□ 2.08
SPG7-208ENST00000563783 CCDC51Q96ER9 411 aa28.05■■■□□ 2.08
SPG7-208ENST00000563783 C8orf76Q96K31 380 aa28.05■■■□□ 2.08
SPG7-208ENST00000563783 TCF25Q9BQ70 676 aa28.05■■■□□ 2.08
SPG7-208ENST00000563783 NFKBIZQ9BYH8 718 aa28.05■■■□□ 2.08
SPG7-208ENST00000563783 XPNPEP1Q9NQW7 623 aa28.05■■■□□ 2.08
SPG7-208ENST00000563783 SRGAP2CP0DJJ0 459 aa28.04■■■□□ 2.08
SPG7-208ENST00000563783 TXKP42681 527 aa28.04■■■□□ 2.08
SPG7-208ENST00000563783 PTENP60484 403 aa28.04■■■□□ 2.08
SPG7-208ENST00000563783 TFDP1Q14186 410 aa28.04■■■□□ 2.08
SPG7-208ENST00000563783 NOMO2Q5JPE7 1267 aa28.04■■■□□ 2.08
SPG7-208ENST00000563783 RBM23Q86U06 439 aaKnown RBP28.04■■■□□ 2.08
SPG7-208ENST00000563783 RNF149Q8NC42 400 aa28.04■■■□□ 2.08
SPG7-208ENST00000563783 FBXO18Q8NFZ0 1043 aa28.04■■■□□ 2.08
SPG7-208ENST00000563783 LRFN3Q9BTN0 628 aa28.04■■■□□ 2.08
SPG7-208ENST00000563783 ENTPD7Q9NQZ7 604 aa28.04■■■□□ 2.08
SPG7-208ENST00000563783 PCDHB2Q9Y5E7 798 aa28.04■■■□□ 2.08
SPG7-208ENST00000563783 PCDHGC5Q9Y5F6 944 aa28.04■■■□□ 2.08
SPG7-208ENST00000563783 HOXA11P31270 313 aaPredicted RBP28.03■■■□□ 2.08
SPG7-208ENST00000563783 TRAPPC10P48553 1259 aa28.03■■■□□ 2.08
SPG7-208ENST00000563783 KIF2CQ99661 725 aa28.03■■■□□ 2.08
SPG7-208ENST00000563783 MINDY3Q9H8M7 445 aa28.03■■■□□ 2.08
SPG7-208ENST00000563783 TUFT1Q9NNX1 390 aa28.03■■■□□ 2.08
SPG7-208ENST00000563783 WNT7AO00755 349 aa28.02■■■□□ 2.08
SPG7-208ENST00000563783 DCXO43602 365 aa28.02■■■□□ 2.08
SPG7-208ENST00000563783 RARRES1P49788 294 aa28.02■■■□□ 2.08
SPG7-208ENST00000563783 BCAR1P56945 870 aa28.02■■■□□ 2.08
SPG7-208ENST00000563783 SMC1AQ14683 1233 aaKnown RBP28.02■■■□□ 2.08
SPG7-208ENST00000563783 CLUL1Q15846 466 aa28.02■■■□□ 2.08
SPG7-208ENST00000563783 CCDC83Q8IWF9 413 aa28.02■■■□□ 2.08
SPG7-208ENST00000563783 TMEM169Q96HH4 297 aa28.02■■■□□ 2.08
SPG7-208ENST00000563783 CCDC43Q96MW1 224 aaKnown RBP28.02■■■□□ 2.08
SPG7-208ENST00000563783 UBN1Q9NPG3 1134 aa28.02■■■□□ 2.08
SPG7-208ENST00000563783 C11orf16Q9NQ32 467 aa28.02■■■□□ 2.08
SPG7-208ENST00000563783 TBC1D13Q9NVG8 400 aa28.02■■■□□ 2.08
SPG7-208ENST00000563783 KANSL3Q9P2N6 904 aa28.02■■■□□ 2.08
SPG7-208ENST00000563783 DAXXQ9UER7 740 aaPredicted RBP28.02■■■□□ 2.08
SPG7-208ENST00000563783 BARX2Q9UMQ3 279 aaPredicted RBP28.02■■■□□ 2.08
SPG7-208ENST00000563783 IRAK3Q9Y616 596 aa28.02■■■□□ 2.08
SPG7-208ENST00000563783 ZBTB39O15060 712 aa28.01■■■□□ 2.07
SPG7-208ENST00000563783 OFD1O75665 1012 aa28.01■■■□□ 2.07
SPG7-208ENST00000563783 ERLIN2O94905 339 aa28.01■■■□□ 2.07
SPG7-208ENST00000563783 HOXB8P17481 243 aaPredicted RBP28.01■■■□□ 2.07
SPG7-208ENST00000563783 RBM25P49756 843 aaKnown RBP28.01■■■□□ 2.07
SPG7-208ENST00000563783 GIT2Q14161 759 aa28.01■■■□□ 2.07
SPG7-208ENST00000563783 C8orf34Q49A92 452 aa28.01■■■□□ 2.07
SPG7-208ENST00000563783 PLPP4Q5VZY2 271 aa28.01■■■□□ 2.07
SPG7-208ENST00000563783 TMC7Q7Z402 723 aa28.01■■■□□ 2.07
SPG7-208ENST00000563783 MRPL43Q8N983 215 aaKnown RBP28.01■■■□□ 2.07
SPG7-208ENST00000563783 INPPL1O15357 1258 aa28■■■□□ 2.07
SPG7-208ENST00000563783 MUTP22033 750 aa28■■■□□ 2.07
SPG7-208ENST00000563783 ARL2P36404 184 aa28■■■□□ 2.07
SPG7-208ENST00000563783 NCBP1Q09161 790 aaKnown RBP28■■■□□ 2.07
SPG7-208ENST00000563783 VN1R2Q8NFZ6 395 aa28■■■□□ 2.07
SPG7-208ENST00000563783 URGCPQ8TCY9 931 aa28■■■□□ 2.07
SPG7-208ENST00000563783 SUSD6Q92537 303 aa28■■■□□ 2.07
SPG7-208ENST00000563783 POLR3CQ9BUI4 534 aaPredicted RBP28■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms