RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 ARMCX2Q7L311 632 aa5.9□□□□□ -1.46
HERPUD1-207ENST00000563781 DPP9Q86TI2 863 aa5.9□□□□□ -1.46
HERPUD1-207ENST00000563781 FERMT3Q86UX7 667 aa5.9□□□□□ -1.46
HERPUD1-207ENST00000563781 VSIG10LQ86VR7 867 aa5.9□□□□□ -1.46
HERPUD1-207ENST00000563781 NOSTRINQ8IVI9 506 aa5.9□□□□□ -1.46
HERPUD1-207ENST00000563781 NSUN6Q8TEA1 469 aaKnown RBP5.9□□□□□ -1.46
HERPUD1-207ENST00000563781 TBCKQ8TEA7 893 aa5.9□□□□□ -1.46
HERPUD1-207ENST00000563781 TRIB2Q92519 343 aa5.9□□□□□ -1.46
HERPUD1-207ENST00000563781 CCDC74AQ96AQ1 378 aa5.9□□□□□ -1.46
HERPUD1-207ENST00000563781 MBOAT7Q96N66 472 aa5.9□□□□□ -1.46
HERPUD1-207ENST00000563781 OSMRQ99650 979 aa5.9□□□□□ -1.46
HERPUD1-207ENST00000563781 PLVAPQ9BX97 442 aa5.9□□□□□ -1.46
HERPUD1-207ENST00000563781 BRMS1Q9HCU9 246 aa5.9□□□□□ -1.46
HERPUD1-207ENST00000563781 LATS2Q9NRM7 1088 aa5.9□□□□□ -1.46
HERPUD1-207ENST00000563781 ADD3Q9UEY8 706 aaKnown RBP5.9□□□□□ -1.46
HERPUD1-207ENST00000563781 TRIM17Q9Y577 477 aa5.9□□□□□ -1.46
HERPUD1-207ENST00000563781 UBIAD1Q9Y5Z9 338 aa5.9□□□□□ -1.46
HERPUD1-207ENST00000563781 PTCH2Q9Y6C5 1203 aa5.9□□□□□ -1.46
HERPUD1-207ENST00000563781 LCTP09848 1927 aa5.89□□□□□ -1.47
HERPUD1-207ENST00000563781 RBBP6Q7Z6E9 1792 aaKnown RBP5.89□□□□□ -1.47
HERPUD1-207ENST00000563781 IGLV3-22A0A075B6J6 115 aa5.89□□□□□ -1.47
HERPUD1-207ENST00000563781 CYP3A7-CYP3A51PA0A087WV96 503 aa5.89□□□□□ -1.47
HERPUD1-207ENST00000563781 CCDC194A0A1B0GVG4 234 aa5.89□□□□□ -1.47
HERPUD1-207ENST00000563781 SPDYE3A6NKU9 549 aa5.89□□□□□ -1.47
HERPUD1-207ENST00000563781 PIK3R2O00459 728 aa5.89□□□□□ -1.47
HERPUD1-207ENST00000563781 SMNDC1O75940 238 aaKnown RBP eCLIP5.89□□□□□ -1.477e-11■■■□□ 15.1
HERPUD1-207ENST00000563781 TDP2O95551 362 aa5.89□□□□□ -1.47
HERPUD1-207ENST00000563781 F13A1P00488 732 aa5.89□□□□□ -1.47
HERPUD1-207ENST00000563781 CYP3A4P08684 503 aa5.89□□□□□ -1.47
HERPUD1-207ENST00000563781 ELNP15502 786 aa5.89□□□□□ -1.47
HERPUD1-207ENST00000563781 ITGB5P18084 799 aa5.89□□□□□ -1.47
HERPUD1-207ENST00000563781 ATF4P18848 351 aaPredicted RBP5.89□□□□□ -1.47
HERPUD1-207ENST00000563781 CYP3A7P24462 503 aa5.89□□□□□ -1.47
HERPUD1-207ENST00000563781 HOXD10P28358 340 aa5.89□□□□□ -1.47
HERPUD1-207ENST00000563781 CIITAP33076 1130 aa5.89□□□□□ -1.47
HERPUD1-207ENST00000563781 CYP2C19P33261 490 aa5.89□□□□□ -1.47
HERPUD1-207ENST00000563781 TOB1P50616 345 aaPredicted RBP5.89□□□□□ -1.47
HERPUD1-207ENST00000563781 PRMT2P55345 433 aa5.89□□□□□ -1.47
HERPUD1-207ENST00000563781 ARHGEF6Q15052 776 aa5.89□□□□□ -1.47
HERPUD1-207ENST00000563781 ZNF394Q53GI3 561 aa5.89□□□□□ -1.47
HERPUD1-207ENST00000563781 RNF187Q5TA31 235 aaPredicted RBP5.89□□□□□ -1.47
HERPUD1-207ENST00000563781 MAP3K21Q5TCX8 1036 aa5.89□□□□□ -1.47
HERPUD1-207ENST00000563781 ARHGEF16Q5VV41 709 aa5.89□□□□□ -1.47
HERPUD1-207ENST00000563781 KIAA0319Q5VV43 1072 aa5.89□□□□□ -1.47
HERPUD1-207ENST00000563781 PCNX4Q63HM2 1172 aa5.89□□□□□ -1.47
HERPUD1-207ENST00000563781 MCTP1Q6DN14 999 aa5.89□□□□□ -1.47
HERPUD1-207ENST00000563781 XRRA1Q6P2D8 792 aa5.89□□□□□ -1.47
HERPUD1-207ENST00000563781 FAM173BQ6P4H8 233 aa5.89□□□□□ -1.47
HERPUD1-207ENST00000563781 ADAMTSL4Q6UY14 1074 aa5.89□□□□□ -1.47
HERPUD1-207ENST00000563781 HS2ST1Q7LGA3 356 aa5.89□□□□□ -1.47
HERPUD1-207ENST00000563781 BRAPQ7Z569 592 aa5.89□□□□□ -1.47
HERPUD1-207ENST00000563781 CTU1Q7Z7A3 348 aaKnown RBP5.89□□□□□ -1.47
HERPUD1-207ENST00000563781 NEK8Q86SG6 692 aa5.89□□□□□ -1.47
HERPUD1-207ENST00000563781 MSL3Q8N5Y2 521 aaKnown RBP5.89□□□□□ -1.47
HERPUD1-207ENST00000563781 TMEM102Q8N9M5 508 aaPredicted RBP5.89□□□□□ -1.47
HERPUD1-207ENST00000563781 TRPV1Q8NER1 839 aa5.89□□□□□ -1.47
HERPUD1-207ENST00000563781 CYP2W1Q8TAV3 490 aa5.89□□□□□ -1.47
HERPUD1-207ENST00000563781 NXPE3Q969Y0 559 aa5.89□□□□□ -1.47
HERPUD1-207ENST00000563781 LENG9Q96B70 501 aa5.89□□□□□ -1.47
HERPUD1-207ENST00000563781 INPP4AQ96PE3 977 aaPredicted RBP5.89□□□□□ -1.47
HERPUD1-207ENST00000563781 HHIPQ96QV1 700 aa5.89□□□□□ -1.47
HERPUD1-207ENST00000563781 IWS1Q96ST2 819 aa5.89□□□□□ -1.47
HERPUD1-207ENST00000563781 POP1Q99575 1024 aaKnown RBP5.89□□□□□ -1.47
HERPUD1-207ENST00000563781 SUV39H2Q9H5I1 410 aa5.89□□□□□ -1.47
HERPUD1-207ENST00000563781 PRDM10Q9NQV6 1147 aa5.89□□□□□ -1.47
HERPUD1-207ENST00000563781 TRIM33Q9UPN9 1127 aa5.89□□□□□ -1.47
HERPUD1-207ENST00000563781 BRCA2P51587 3418 aa5.89□□□□□ -1.47
HERPUD1-207ENST00000563781 SYNGAP1Q96PV0 1343 aa5.89□□□□□ -1.47
HERPUD1-207ENST00000563781 A0A1W2PP55 124 aa5.88□□□□□ -1.47
HERPUD1-207ENST00000563781 ASB14A6NK59 587 aa5.88□□□□□ -1.47
HERPUD1-207ENST00000563781 FAM86B1E9PN63 330 aa5.88□□□□□ -1.47
HERPUD1-207ENST00000563781 PDE2AO00408 941 aaPredicted RBP5.88□□□□□ -1.47
HERPUD1-207ENST00000563781 MEIS1O00470 390 aa5.88□□□□□ -1.47
HERPUD1-207ENST00000563781 GIPC1O14908 333 aa5.88□□□□□ -1.47
HERPUD1-207ENST00000563781 SLC37A4O43826 429 aa5.88□□□□□ -1.47
HERPUD1-207ENST00000563781 ADCY3O60266 1144 aa5.88□□□□□ -1.47
HERPUD1-207ENST00000563781 EIF3JO75822 258 aaKnown RBP5.88□□□□□ -1.47
HERPUD1-207ENST00000563781 ARIH2O95376 493 aa5.88□□□□□ -1.47
HERPUD1-207ENST00000563781 FAM86B2P0C5J1 330 aa5.88□□□□□ -1.47
HERPUD1-207ENST00000563781 ZNF865P0CJ78 1059 aaPredicted RBP5.88□□□□□ -1.47
HERPUD1-207ENST00000563781 MYCLP12524 364 aaPredicted RBP5.88□□□□□ -1.47
HERPUD1-207ENST00000563781 CCND2P30279 289 aa5.88□□□□□ -1.47
HERPUD1-207ENST00000563781 TRAPPC10P48553 1259 aa5.88□□□□□ -1.47
HERPUD1-207ENST00000563781 USP11P51784 963 aa5.88□□□□□ -1.47
HERPUD1-207ENST00000563781 NUCB2P80303 420 aa5.88□□□□□ -1.47
HERPUD1-207ENST00000563781 LETM2Q2VYF4 491 aa5.88□□□□□ -1.47
HERPUD1-207ENST00000563781 CEP55Q53EZ4 464 aa5.88□□□□□ -1.47
HERPUD1-207ENST00000563781 PRAMEF19Q5SWL8 479 aa5.88□□□□□ -1.47
HERPUD1-207ENST00000563781 TMEM63BQ5T3F8 832 aa5.88□□□□□ -1.47
HERPUD1-207ENST00000563781 PPP4R3AQ6IN85 833 aa5.88□□□□□ -1.47
HERPUD1-207ENST00000563781 GDF6Q6KF10 455 aaPredicted RBP5.88□□□□□ -1.47
HERPUD1-207ENST00000563781 TAPT1Q6NXT6 567 aa5.88□□□□□ -1.47
HERPUD1-207ENST00000563781 CCDC62Q6P9F0 684 aa5.88□□□□□ -1.47
HERPUD1-207ENST00000563781 MOXD1Q6UVY6 613 aa5.88□□□□□ -1.47
HERPUD1-207ENST00000563781 NIPA1Q7RTP0 329 aa5.88□□□□□ -1.47
HERPUD1-207ENST00000563781 FBXO16Q8IX29 292 aaPredicted RBP5.88□□□□□ -1.47
HERPUD1-207ENST00000563781 CACTIN-AS1Q8N1I8 211 aa5.88□□□□□ -1.47
HERPUD1-207ENST00000563781 RAET1EQ8TD07 263 aa5.88□□□□□ -1.47
HERPUD1-207ENST00000563781 MRFAP1L1Q96HT8 127 aa5.88□□□□□ -1.47
HERPUD1-207ENST00000563781 CHAMP1Q96JM3 812 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms