RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 STRN3Q13033 797 aa24.07■■□□□ 1.44
LINC01960-201ENST00000563759 GNASQ5JWF2 1037 aa24.07■■□□□ 1.44
LINC01960-201ENST00000563759 RHPN2Q8IUC4 686 aa24.07■■□□□ 1.44
LINC01960-201ENST00000563759 SCN10AQ9Y5Y9 1956 aa24.06■■□□□ 1.44
LINC01960-201ENST00000563759 MYADML2A6NDP7 307 aa24.06■■□□□ 1.44
LINC01960-201ENST00000563759 HNRNPDLO14979 420 aaKnown RBP24.06■■□□□ 1.44
LINC01960-201ENST00000563759 SLC16A3O15427 465 aaKnown RBP24.06■■□□□ 1.44
LINC01960-201ENST00000563759 PGK1P00558 417 aa24.06■■□□□ 1.44
LINC01960-201ENST00000563759 SMIM10L2AP0DMW4 78 aa24.06■■□□□ 1.44
LINC01960-201ENST00000563759 SMIM10L2BP0DMW5 78 aa24.06■■□□□ 1.44
LINC01960-201ENST00000563759 EPB41P11171 864 aaKnown RBP24.06■■□□□ 1.44
LINC01960-201ENST00000563759 TMOD1P28289 359 aa24.06■■□□□ 1.44
LINC01960-201ENST00000563759 PSEN2P49810 448 aa24.06■■□□□ 1.44
LINC01960-201ENST00000563759 CYP2J2P51589 502 aa24.06■■□□□ 1.44
LINC01960-201ENST00000563759 MAN2A1Q16706 1144 aa24.06■■□□□ 1.44
LINC01960-201ENST00000563759 MTHFD1LQ6UB35 978 aa24.06■■□□□ 1.44
LINC01960-201ENST00000563759 BICD1Q96G01 975 aa24.06■■□□□ 1.44
LINC01960-201ENST00000563759 XPNPEP3Q9NQH7 507 aa24.06■■□□□ 1.44
LINC01960-201ENST00000563759 PHLPP2Q6ZVD8 1323 aa24.05■■□□□ 1.44
LINC01960-201ENST00000563759 RRN3P2A6NIE6 340 aa24.05■■□□□ 1.44
LINC01960-201ENST00000563759 PRMT2P55345 433 aa24.05■■□□□ 1.44
LINC01960-201ENST00000563759 MARSP56192 900 aaKnown RBP24.05■■□□□ 1.44
LINC01960-201ENST00000563759 SNRPFP62306 86 aaKnown RBP24.05■■□□□ 1.44
LINC01960-201ENST00000563759 PURAQ00577 322 aaKnown RBP24.05■■□□□ 1.44
LINC01960-201ENST00000563759 UBXN1Q04323 297 aa24.05■■□□□ 1.44
LINC01960-201ENST00000563759 TFDP1Q14186 410 aa24.05■■□□□ 1.44
LINC01960-201ENST00000563759 RNF149Q8NC42 400 aa24.05■■□□□ 1.44
LINC01960-201ENST00000563759 UPF3AQ9H1J1 476 aaKnown RBP24.05■■□□□ 1.44
LINC01960-201ENST00000563759 IMPACTQ9P2X3 320 aa24.05■■□□□ 1.44
LINC01960-201ENST00000563759 NRCAMQ92823 1304 aa24.05■■□□□ 1.44
LINC01960-201ENST00000563759 TISP43B9A030 160 aa24.04■■□□□ 1.44
LINC01960-201ENST00000563759 K7ERI5 159 aa24.04■■□□□ 1.44
LINC01960-201ENST00000563759 AKAP3O75969 853 aa24.04■■□□□ 1.44
LINC01960-201ENST00000563759 SRGAP2CP0DJJ0 459 aa24.04■■□□□ 1.44
LINC01960-201ENST00000563759 SPECC1LQ69YQ0 1117 aa24.04■■□□□ 1.44
LINC01960-201ENST00000563759 ARMCX5Q6P1M9 558 aa24.04■■□□□ 1.44
LINC01960-201ENST00000563759 SLAIN1Q8ND83 568 aa24.04■■□□□ 1.44
LINC01960-201ENST00000563759 LMBR1Q8WVP7 490 aa24.04■■□□□ 1.44
LINC01960-201ENST00000563759 NLRP4Q96MN2 994 aa24.04■■□□□ 1.44
LINC01960-201ENST00000563759 SETD4Q9NVD3 440 aa24.04■■□□□ 1.44
LINC01960-201ENST00000563759 FRMD4BQ9Y2L6 1034 aa24.04■■□□□ 1.44
LINC01960-201ENST00000563759 KPNA6O60684 536 aa24.04■■□□□ 1.44
LINC01960-201ENST00000563759 MIIPQ5JXC2 388 aa24.04■■□□□ 1.44
LINC01960-201ENST00000563759 MAP3K21Q5TCX8 1036 aa24.04■■□□□ 1.44
LINC01960-201ENST00000563759 TAS1R3Q7RTX0 852 aa24.04■■□□□ 1.44
LINC01960-201ENST00000563759 ZBTB8OSQ8IWT0 167 aa24.04■■□□□ 1.44
LINC01960-201ENST00000563759 ARMCX3Q9UH62 379 aaPredicted RBP24.04■■□□□ 1.44
LINC01960-201ENST00000563759 AKT3Q9Y243 479 aa24.04■■□□□ 1.44
LINC01960-201ENST00000563759 TRIM17Q9Y577 477 aa24.04■■□□□ 1.44
LINC01960-201ENST00000563759 CEP350Q5VT06 3117 aa24.04■■□□□ 1.44
LINC01960-201ENST00000563759 ASAP2O43150 1006 aa24.03■■□□□ 1.44
LINC01960-201ENST00000563759 ZEB2O60315 1214 aa24.03■■□□□ 1.44
LINC01960-201ENST00000563759 MYCNP04198 464 aaPredicted RBP24.03■■□□□ 1.44
LINC01960-201ENST00000563759 GJB1P08034 283 aa24.03■■□□□ 1.44
LINC01960-201ENST00000563759 CASP4P49662 377 aa24.03■■□□□ 1.44
LINC01960-201ENST00000563759 EFNA5P52803 228 aa24.03■■□□□ 1.44
LINC01960-201ENST00000563759 CCDC186Q7Z3E2 898 aa24.03■■□□□ 1.44
LINC01960-201ENST00000563759 FRMD5Q7Z6J6 570 aa24.03■■□□□ 1.44
LINC01960-201ENST00000563759 SLC9A9Q8IVB4 645 aa24.03■■□□□ 1.44
LINC01960-201ENST00000563759 C12orf56Q8IXR9 622 aa24.03■■□□□ 1.44
LINC01960-201ENST00000563759 KCNN1Q92952 543 aa24.03■■□□□ 1.44
LINC01960-201ENST00000563759 MAP7D2Q96T17 732 aa24.03■■□□□ 1.44
LINC01960-201ENST00000563759 HAS3O00219 553 aa24.02■■□□□ 1.44
LINC01960-201ENST00000563759 EXOC3O60645 756 aa24.02■■□□□ 1.44
LINC01960-201ENST00000563759 PSMC2P35998 433 aaKnown RBP24.02■■□□□ 1.44
LINC01960-201ENST00000563759 MYBPC2Q14324 1141 aa24.02■■□□□ 1.44
LINC01960-201ENST00000563759 VWA3BQ502W6 1294 aa24.02■■□□□ 1.44
LINC01960-201ENST00000563759 MARCH8Q5T0T0 291 aa24.02■■□□□ 1.44
LINC01960-201ENST00000563759 FKBP15Q5T1M5 1219 aa24.02■■□□□ 1.44
LINC01960-201ENST00000563759 CDCA2Q69YH5 1023 aaPredicted RBP24.02■■□□□ 1.44
LINC01960-201ENST00000563759 NFRKBQ6P4R8 1299 aa24.02■■□□□ 1.44
LINC01960-201ENST00000563759 TRIM59Q8IWR1 403 aa24.02■■□□□ 1.44
LINC01960-201ENST00000563759 FAM186BQ8IYM0 893 aa24.02■■□□□ 1.44
LINC01960-201ENST00000563759 LINC01465Q8N7H1 131 aa24.02■■□□□ 1.44
LINC01960-201ENST00000563759 PPP1R13LQ8WUF5 828 aa24.02■■□□□ 1.44
LINC01960-201ENST00000563759 CBWD1Q9BRT8 395 aa24.02■■□□□ 1.44
LINC01960-201ENST00000563759 MKNK1Q9BUB5 465 aa24.02■■□□□ 1.44
LINC01960-201ENST00000563759 C2orf40Q9H1Z8 148 aa24.02■■□□□ 1.44
LINC01960-201ENST00000563759 NDST4Q9H3R1 872 aa24.02■■□□□ 1.44
LINC01960-201ENST00000563759 PCIF1Q9H4Z3 704 aa24.02■■□□□ 1.44
LINC01960-201ENST00000563759 METTL14Q9HCE5 456 aaKnown RBP24.02■■□□□ 1.44
LINC01960-201ENST00000563759 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.02■■□□□ 1.44
LINC01960-201ENST00000563759 INHAP05111 366 aa24.02■■□□□ 1.44
LINC01960-201ENST00000563759 LIG4P49917 911 aa24.02■■□□□ 1.44
LINC01960-201ENST00000563759 MTG1Q9BT17 334 aaPredicted RBP24.02■■□□□ 1.44
LINC01960-201ENST00000563759 TMEM134Q9H6X4 195 aa24.02■■□□□ 1.44
LINC01960-201ENST00000563759 DMAC2Q9NW81 257 aa24.02■■□□□ 1.44
LINC01960-201ENST00000563759 HSPBP1Q9NZL4 362 aa24.02■■□□□ 1.44
LINC01960-201ENST00000563759 ADAMTS4O75173 837 aa24.01■■□□□ 1.43
LINC01960-201ENST00000563759 GRK4P32298 578 aa24.01■■□□□ 1.43
LINC01960-201ENST00000563759 PBX1P40424 430 aa24.01■■□□□ 1.43
LINC01960-201ENST00000563759 ZNF668Q96K58 619 aaPredicted RBP24.01■■□□□ 1.43
LINC01960-201ENST00000563759 DDX20Q9UHI6 824 aaKnown RBP24.01■■□□□ 1.43
LINC01960-201ENST00000563759 ANKRD63C9JTQ0 380 aa24■■□□□ 1.43
LINC01960-201ENST00000563759 GSDMDP57764 484 aa24■■□□□ 1.43
LINC01960-201ENST00000563759 HS1BP3Q53T59 392 aa24■■□□□ 1.43
LINC01960-201ENST00000563759 DCAF17Q5H9S7 520 aaPredicted RBP24■■□□□ 1.43
LINC01960-201ENST00000563759 C7orf31Q8N865 590 aa24■■□□□ 1.43
LINC01960-201ENST00000563759 XXYLT1Q8NBI6 393 aa24■■□□□ 1.43
LINC01960-201ENST00000563759 TMEM174Q8WUU8 243 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms