RNA–Protein interactions for RNA: ENST00000563670.1

HERC2-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 5

Gene HERC2, Length 618 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-203ENST00000563670 FOXD4L6Q3SYB3 417 aaPredicted RBP9.49□□□□□ -0.89
HERC2-203ENST00000563670 NFRKBQ6P4R8 1299 aa9.49□□□□□ -0.89
HERC2-203ENST00000563670 LRSAM1Q6UWE0 723 aa9.49□□□□□ -0.89
HERC2-203ENST00000563670 FOXD4L3Q6VB84 417 aaPredicted RBP9.49□□□□□ -0.89
HERC2-203ENST00000563670 CRIPAKQ8N1N5 446 aa9.49□□□□□ -0.89
HERC2-203ENST00000563670 AFAP1L1Q8TED9 768 aa9.49□□□□□ -0.89
HERC2-203ENST00000563670 KAT2BQ92831 832 aa9.49□□□□□ -0.89
HERC2-203ENST00000563670 ATP6V0A1Q93050 837 aa9.49□□□□□ -0.89
HERC2-203ENST00000563670 ZDHHC16Q969W1 377 aa9.49□□□□□ -0.89
HERC2-203ENST00000563670 FAM167AQ96KS9 214 aa9.49□□□□□ -0.89
HERC2-203ENST00000563670 MTMR9Q96QG7 549 aa9.49□□□□□ -0.89
HERC2-203ENST00000563670 C16orf70Q9BSU1 422 aa9.49□□□□□ -0.89
HERC2-203ENST00000563670 TRMT13Q9NUP7 481 aaKnown RBP9.49□□□□□ -0.89
HERC2-203ENST00000563670 LRWD1Q9UFC0 647 aa9.49□□□□□ -0.89
HERC2-203ENST00000563670 CFAP45Q9UL16 551 aa9.49□□□□□ -0.89
HERC2-203ENST00000563670 SCN5AQ14524 2016 aa9.49□□□□□ -0.89
HERC2-203ENST00000563670 TANC1Q9C0D5 1861 aa9.49□□□□□ -0.89
HERC2-203ENST00000563670 MYH11P35749 1972 aa9.48□□□□□ -0.89
HERC2-203ENST00000563670 ABHD14A-ACY1A0A1B0GW23 586 aa9.48□□□□□ -0.89
HERC2-203ENST00000563670 C17orf102A2RUQ5 167 aa9.48□□□□□ -0.89
HERC2-203ENST00000563670 HBP1O60381 514 aa9.48□□□□□ -0.89
HERC2-203ENST00000563670 BRD1O95696 1058 aa9.48□□□□□ -0.89
HERC2-203ENST00000563670 F2P00734 622 aa9.48□□□□□ -0.89
HERC2-203ENST00000563670 P4HBP07237 508 aaKnown RBP9.48□□□□□ -0.89
HERC2-203ENST00000563670 ATF7P17544 494 aaPredicted RBP9.48□□□□□ -0.89
HERC2-203ENST00000563670 NCLP19338 710 aaKnown RBP9.48□□□□□ -0.89
HERC2-203ENST00000563670 MARK3P27448 753 aa9.48□□□□□ -0.89
HERC2-203ENST00000563670 PSMC5P62195 406 aa9.48□□□□□ -0.89
HERC2-203ENST00000563670 HTRA4P83105 476 aaPredicted RBP9.48□□□□□ -0.89
HERC2-203ENST00000563670 ATP2C1P98194 919 aaPredicted RBP9.48□□□□□ -0.89
HERC2-203ENST00000563670 LMNB2Q03252 620 aa9.48□□□□□ -0.89
HERC2-203ENST00000563670 PDIA5Q14554 519 aa9.48□□□□□ -0.89
HERC2-203ENST00000563670 KRT79Q5XKE5 535 aa9.48□□□□□ -0.89
HERC2-203ENST00000563670 ARL6IP4Q66PJ3 421 aaKnown RBP9.48□□□□□ -0.89
HERC2-203ENST00000563670 HAUS3Q68CZ6 603 aa9.48□□□□□ -0.89
HERC2-203ENST00000563670 ATL3Q6DD88 541 aa9.48□□□□□ -0.89
HERC2-203ENST00000563670 FAM173BQ6P4H8 233 aa9.48□□□□□ -0.89
HERC2-203ENST00000563670 TRMT1LQ7Z2T5 733 aaKnown RBP9.48□□□□□ -0.89
HERC2-203ENST00000563670 TRIM50Q86XT4 487 aa9.48□□□□□ -0.89
HERC2-203ENST00000563670 CCDC60Q8IWA6 550 aaPredicted RBP9.48□□□□□ -0.89
HERC2-203ENST00000563670 RETREG2Q8NC44 543 aa9.48□□□□□ -0.89
HERC2-203ENST00000563670 RPGRIP1Q96KN7 1286 aa9.48□□□□□ -0.89
HERC2-203ENST00000563670 CCDC43Q96MW1 224 aaKnown RBP9.48□□□□□ -0.89
HERC2-203ENST00000563670 FAM117AQ9C073 453 aa9.48□□□□□ -0.89
HERC2-203ENST00000563670 HDAC6Q9UBN7 1215 aa9.48□□□□□ -0.89
HERC2-203ENST00000563670 VAV3Q9UKW4 847 aa9.48□□□□□ -0.89
HERC2-203ENST00000563670 TELO2Q9Y4R8 837 aa9.48□□□□□ -0.89
HERC2-203ENST00000563670 CLIC4Q9Y696 253 aa9.48□□□□□ -0.89
HERC2-203ENST00000563670 IGKV6D-21A0A0A0MT36 114 aa9.47□□□□□ -0.89
HERC2-203ENST00000563670 VWA3AA6NCI4 1184 aa9.47□□□□□ -0.89
HERC2-203ENST00000563670 POTEMA6NI47 508 aa9.47□□□□□ -0.89
HERC2-203ENST00000563670 RRN3P2A6NIE6 340 aa9.47□□□□□ -0.89
HERC2-203ENST00000563670 CYSRT1A8MQ03 144 aa9.47□□□□□ -0.89
HERC2-203ENST00000563670 HAS3O00219 553 aa9.47□□□□□ -0.89
HERC2-203ENST00000563670 EML1O00423 815 aa9.47□□□□□ -0.89
HERC2-203ENST00000563670 EFCAB14O75071 495 aa9.47□□□□□ -0.89
HERC2-203ENST00000563670 SMIM10L2AP0DMW4 78 aa9.47□□□□□ -0.89
HERC2-203ENST00000563670 SMIM10L2BP0DMW5 78 aa9.47□□□□□ -0.89
HERC2-203ENST00000563670 QARSP47897 775 aaKnown RBP9.47□□□□□ -0.89
HERC2-203ENST00000563670 KRT85P78386 507 aa9.47□□□□□ -0.89
HERC2-203ENST00000563670 PPFIA1Q13136 1202 aa9.47□□□□□ -0.89
HERC2-203ENST00000563670 MTMR3Q13615 1198 aa9.47□□□□□ -0.89
HERC2-203ENST00000563670 PKP1Q13835 747 aa9.47□□□□□ -0.89
HERC2-203ENST00000563670 PLCB4Q15147 1175 aa9.47□□□□□ -0.89
HERC2-203ENST00000563670 PTGISQ16647 500 aa9.47□□□□□ -0.89
HERC2-203ENST00000563670 TSR1Q2NL82 804 aaKnown RBP9.47□□□□□ -0.89
HERC2-203ENST00000563670 ZNF484Q5JVG2 852 aa9.47□□□□□ -0.89
HERC2-203ENST00000563670 CNKSR3Q6P9H4 555 aa9.47□□□□□ -0.89
HERC2-203ENST00000563670 ZC3H14Q6PJT7 736 aaKnown RBP9.47□□□□□ -0.89
HERC2-203ENST00000563670 OTUD6AQ7L8S5 288 aa9.47□□□□□ -0.89
HERC2-203ENST00000563670 TPH2Q8IWU9 490 aa9.47□□□□□ -0.89
HERC2-203ENST00000563670 CCDC155Q8N6L0 562 aa9.47□□□□□ -0.89
HERC2-203ENST00000563670 C4orf32Q8N8J7 132 aa9.47□□□□□ -0.89
HERC2-203ENST00000563670 ZNF454Q8N9F8 522 aa9.47□□□□□ -0.89
HERC2-203ENST00000563670 RASSF8Q8NHQ8 419 aa9.47□□□□□ -0.89
HERC2-203ENST00000563670 DYDC2Q96IM9 177 aa9.47□□□□□ -0.89
HERC2-203ENST00000563670 IPO9Q96P70 1041 aaKnown RBP9.47□□□□□ -0.89
HERC2-203ENST00000563670 USP28Q96RU2 1077 aa9.47□□□□□ -0.89
HERC2-203ENST00000563670 LMAN2LQ9H0V9 348 aa9.47□□□□□ -0.89
HERC2-203ENST00000563670 ZSWIM4Q9H7M6 989 aa9.47□□□□□ -0.89
HERC2-203ENST00000563670 CLEC1BQ9P126 229 aa9.47□□□□□ -0.89
HERC2-203ENST00000563670 TFIP11Q9UBB9 837 aaKnown RBP9.47□□□□□ -0.89
HERC2-203ENST00000563670 GTF2IRD1Q9UHL9 959 aa9.47□□□□□ -0.89
HERC2-203ENST00000563670 USP15Q9Y4E8 981 aaPredicted RBP9.47□□□□□ -0.89
HERC2-203ENST00000563670 MAFBQ9Y5Q3 323 aaPredicted RBP9.47□□□□□ -0.89
HERC2-203ENST00000563670 NRCAMQ92823 1304 aa9.47□□□□□ -0.89
HERC2-203ENST00000563670 ARID2Q68CP9 1835 aa9.47□□□□□ -0.89
HERC2-203ENST00000563670 DDX11L8A8MPP1 907 aa9.46□□□□□ -0.9
HERC2-203ENST00000563670 SPTLC2O15270 562 aa9.46□□□□□ -0.9
HERC2-203ENST00000563670 LINC01565O15544 149 aa9.46□□□□□ -0.9
HERC2-203ENST00000563670 OATP04181 439 aa9.46□□□□□ -0.9
HERC2-203ENST00000563670 AOC1P19801 751 aa9.46□□□□□ -0.9
HERC2-203ENST00000563670 MARCKSP29966 332 aaPredicted RBP9.46□□□□□ -0.9
HERC2-203ENST00000563670 CLCN1P35523 988 aa9.46□□□□□ -0.9
HERC2-203ENST00000563670 TXLNAP40222 546 aa9.46□□□□□ -0.9
HERC2-203ENST00000563670 CCT6AP40227 531 aaKnown RBP9.46□□□□□ -0.9
HERC2-203ENST00000563670 NDUFV1P49821 464 aa9.46□□□□□ -0.9
HERC2-203ENST00000563670 IGBP1P78318 339 aa9.46□□□□□ -0.9
HERC2-203ENST00000563670 PRKCEQ02156 737 aa9.46□□□□□ -0.9
HERC2-203ENST00000563670 CYP4A11Q02928 519 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms