RNA–Protein interactions for RNA: ENST00000563663.5

SCAMP2-203, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 1,787 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-203ENST00000563663 PSPC1Q8WXF1 523 aaKnown RBP16.33■□□□□ 0.21
SCAMP2-203ENST00000563663 FDXACB1Q9BRP7 624 aaPredicted RBP16.33■□□□□ 0.21
SCAMP2-203ENST00000563663 DNM3Q9UQ16 869 aa16.33■□□□□ 0.21
SCAMP2-203ENST00000563663 GINS2Q9Y248 185 aa16.33■□□□□ 0.21
SCAMP2-203ENST00000563663 ABHD14A-ACY1A0A1B0GW23 586 aa16.33■□□□□ 0.2
SCAMP2-203ENST00000563663 ARHGEF35A5YM69 484 aa16.33■□□□□ 0.2
SCAMP2-203ENST00000563663 E2F4Q16254 413 aa16.33■□□□□ 0.2
SCAMP2-203ENST00000563663 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.33■□□□□ 0.27e-6■□□□□ 9
SCAMP2-203ENST00000563663 ELOA2Q8IYF1 753 aaPredicted RBP16.33■□□□□ 0.2
SCAMP2-203ENST00000563663 SEPT8Q92599 483 aa16.33■□□□□ 0.2
SCAMP2-203ENST00000563663 NAT10Q9H0A0 1025 aaKnown RBP16.33■□□□□ 0.2
SCAMP2-203ENST00000563663 POLR3FQ9H1D9 316 aaPredicted RBP16.33■□□□□ 0.2
SCAMP2-203ENST00000563663 SPTLC3Q9NUV7 552 aa16.33■□□□□ 0.2
SCAMP2-203ENST00000563663 COL6A3P12111 3177 aa16.32■□□□□ 0.2
SCAMP2-203ENST00000563663 M0QZ92 97 aa16.32■□□□□ 0.2
SCAMP2-203ENST00000563663 CUTAO60888 179 aa16.32■□□□□ 0.2
SCAMP2-203ENST00000563663 PLA2G4BP0C869 781 aa16.32■□□□□ 0.2
SCAMP2-203ENST00000563663 DNM2P50570 870 aa16.32■□□□□ 0.2
SCAMP2-203ENST00000563663 DSC3Q14574 896 aa16.32■□□□□ 0.2
SCAMP2-203ENST00000563663 ZRSR1Q15695 479 aaKnown RBP16.32■□□□□ 0.2
SCAMP2-203ENST00000563663 MCPH1Q8NEM0 835 aa16.32■□□□□ 0.2
SCAMP2-203ENST00000563663 TCP11Q8WWU5 503 aa16.32■□□□□ 0.2
SCAMP2-203ENST00000563663 RAD54LQ92698 747 aa16.32■□□□□ 0.2
SCAMP2-203ENST00000563663 APBB2Q92870 758 aa16.32■□□□□ 0.2
SCAMP2-203ENST00000563663 BPIFA3Q9BQP9 254 aa16.32■□□□□ 0.2
SCAMP2-203ENST00000563663 DNAJC25Q9H1X3 360 aa16.32■□□□□ 0.2
SCAMP2-203ENST00000563663 POLD4Q9HCU8 107 aa16.32■□□□□ 0.2
SCAMP2-203ENST00000563663 ST3GAL5Q9UNP4 418 aa16.32■□□□□ 0.2
SCAMP2-203ENST00000563663 ADGRA3Q8IWK6 1321 aa16.32■□□□□ 0.2
SCAMP2-203ENST00000563663 GRXCR1A8MXD5 290 aa16.31■□□□□ 0.2
SCAMP2-203ENST00000563663 GUCY2CP25092 1073 aa16.31■□□□□ 0.2
SCAMP2-203ENST00000563663 ZNF75DP51815 510 aa16.31■□□□□ 0.2
SCAMP2-203ENST00000563663 CDCA2Q69YH5 1023 aaPredicted RBP16.31■□□□□ 0.2
SCAMP2-203ENST00000563663 TMCO2Q7Z6W1 182 aaPredicted RBP16.31■□□□□ 0.2
SCAMP2-203ENST00000563663 NLRP4Q96MN2 994 aa16.31■□□□□ 0.2
SCAMP2-203ENST00000563663 NFKBIZQ9BYH8 718 aa16.31■□□□□ 0.2
SCAMP2-203ENST00000563663 KIAA1468Q9P260 1216 aa16.31■□□□□ 0.2
SCAMP2-203ENST00000563663 RPS6KA5O75582 802 aa16.31■□□□□ 0.2
SCAMP2-203ENST00000563663 FGFR4P22455 802 aa16.31■□□□□ 0.2
SCAMP2-203ENST00000563663 FXR1P51114 621 aaKnown RBP eCLIP16.31■□□□□ 0.2
SCAMP2-203ENST00000563663 NDUFA8P51970 172 aa16.31■□□□□ 0.2
SCAMP2-203ENST00000563663 PTENP60484 403 aa16.31■□□□□ 0.2
SCAMP2-203ENST00000563663 POU5F1BQ06416 359 aa16.31■□□□□ 0.2
SCAMP2-203ENST00000563663 PAK2Q13177 524 aa16.31■□□□□ 0.2
SCAMP2-203ENST00000563663 AMHR2Q16671 573 aa16.31■□□□□ 0.2
SCAMP2-203ENST00000563663 RESP18Q5W5W9 173 aa16.31■□□□□ 0.2
SCAMP2-203ENST00000563663 MAEAQ7L5Y9 396 aa16.31■□□□□ 0.2
SCAMP2-203ENST00000563663 RNF149Q8NC42 400 aa16.31■□□□□ 0.2
SCAMP2-203ENST00000563663 NLRP7Q8WX94 980 aa16.31■□□□□ 0.2
SCAMP2-203ENST00000563663 TSPYL2Q9H2G4 693 aaPredicted RBP16.31■□□□□ 0.2
SCAMP2-203ENST00000563663 GOLGA6L19H0YKK7 550 aa16.3■□□□□ 0.2
SCAMP2-203ENST00000563663 ASAP2O43150 1006 aa16.3■□□□□ 0.2
SCAMP2-203ENST00000563663 ZNF202O95125 648 aa16.3■□□□□ 0.2
SCAMP2-203ENST00000563663 ACTN1P12814 892 aa16.3■□□□□ 0.2
SCAMP2-203ENST00000563663 CDC42EP1Q00587 391 aa16.3■□□□□ 0.2
SCAMP2-203ENST00000563663 PLCB2Q00722 1185 aa16.3■□□□□ 0.2
SCAMP2-203ENST00000563663 IKBKEQ14164 716 aa16.3■□□□□ 0.2
SCAMP2-203ENST00000563663 MCM6Q14566 821 aa16.3■□□□□ 0.2
SCAMP2-203ENST00000563663 MXD4Q14582 209 aaPredicted RBP16.3■□□□□ 0.2
SCAMP2-203ENST00000563663 NOLC1Q14978 699 aaKnown RBP eCLIP16.3■□□□□ 0.2
SCAMP2-203ENST00000563663 CEP57L1Q8IYX8 460 aa16.3■□□□□ 0.2
SCAMP2-203ENST00000563663 CALML4Q96GE6 196 aa16.3■□□□□ 0.2
SCAMP2-203ENST00000563663 MRFAP1L1Q96HT8 127 aa16.3■□□□□ 0.2
SCAMP2-203ENST00000563663 CCDC43Q96MW1 224 aaKnown RBP16.3■□□□□ 0.2
SCAMP2-203ENST00000563663 RC3H2Q9HBD1 1191 aaKnown RBP16.3■□□□□ 0.2
SCAMP2-203ENST00000563663 HPSEQ9Y251 543 aa16.3■□□□□ 0.2
SCAMP2-203ENST00000563663 PRUNE2Q8WUY3 3088 aa16.3■□□□□ 0.2
SCAMP2-203ENST00000563663 FNDC1Q4ZHG4 1894 aaPredicted RBP16.29■□□□□ 0.2
SCAMP2-203ENST00000563663 NPHP3-ACAD11A0A0J9YXS1 232 aa16.29■□□□□ 0.2
SCAMP2-203ENST00000563663 A0A1B0GVL5 298 aa16.29■□□□□ 0.2
SCAMP2-203ENST00000563663 ENPP3O14638 875 aa16.29■□□□□ 0.2
SCAMP2-203ENST00000563663 HIP1RO75146 1068 aa16.29■□□□□ 0.2
SCAMP2-203ENST00000563663 EDN1P05305 212 aa16.29■□□□□ 0.2
SCAMP2-203ENST00000563663 SRGAP2CP0DJJ0 459 aa16.29■□□□□ 0.2
SCAMP2-203ENST00000563663 MBTD1Q05BQ5 628 aa16.29■□□□□ 0.2
SCAMP2-203ENST00000563663 KIAA1524Q8TCG1 905 aa16.29■□□□□ 0.2
SCAMP2-203ENST00000563663 LARP4BQ92615 738 aaKnown RBP16.29■□□□□ 0.2
SCAMP2-203ENST00000563663 LRCH3Q96II8 777 aa16.29■□□□□ 0.2
SCAMP2-203ENST00000563663 CDK5RAP3Q96JB5 506 aa16.29■□□□□ 0.2
SCAMP2-203ENST00000563663 GCOM2Q9BZD3 368 aaPredicted RBP16.29■□□□□ 0.2
SCAMP2-203ENST00000563663 TRIM5Q9C035 493 aa16.29■□□□□ 0.2
SCAMP2-203ENST00000563663 CCDC113Q9H0I3 377 aa16.29■□□□□ 0.2
SCAMP2-203ENST00000563663 STK17AQ9UEE5 414 aa16.29■□□□□ 0.2
SCAMP2-203ENST00000563663 SLC4A7Q9Y6M7 1214 aa16.29■□□□□ 0.2
SCAMP2-203ENST00000563663 EFCAB14O75071 495 aa16.28■□□□□ 0.2
SCAMP2-203ENST00000563663 HOXA11P31270 313 aaPredicted RBP16.28■□□□□ 0.2
SCAMP2-203ENST00000563663 PBX2P40425 430 aa16.28■□□□□ 0.2
SCAMP2-203ENST00000563663 FAM102BQ5T8I3 360 aa16.28■□□□□ 0.2
SCAMP2-203ENST00000563663 PHOSPHO2Q8TCD6 241 aa16.28■□□□□ 0.2
SCAMP2-203ENST00000563663 SLC9A7Q96T83 725 aa16.28■□□□□ 0.2
SCAMP2-203ENST00000563663 KCND2Q9NZV8 630 aa16.28■□□□□ 0.2
SCAMP2-203ENST00000563663 MYO9BQ13459 2157 aa16.28■□□□□ 0.2
SCAMP2-203ENST00000563663 ZBBXA8MT70 800 aa16.28■□□□□ 0.2
SCAMP2-203ENST00000563663 C9IYK1 514 aa16.28■□□□□ 0.2
SCAMP2-203ENST00000563663 ARHGEF15O94989 841 aa16.28■□□□□ 0.2
SCAMP2-203ENST00000563663 ATP2A2P16615 1042 aaKnown RBP16.28■□□□□ 0.2
SCAMP2-203ENST00000563663 ZNF131P52739 623 aa16.28■□□□□ 0.2
SCAMP2-203ENST00000563663 SMAD3P84022 425 aaKnown RBP16.28■□□□□ 0.2
SCAMP2-203ENST00000563663 NFX1Q12986 1120 aaKnown RBP16.28■□□□□ 0.2
SCAMP2-203ENST00000563663 SRGAP1Q7Z6B7 1085 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms