RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 SUGP1Q8IWZ8 645 aaKnown RBP18.85■□□□□ 0.61
HDGFL3-203ENST00000563404 VPS52Q8N1B4 723 aa18.85■□□□□ 0.61
HDGFL3-203ENST00000563404 C12orf76Q8N812 135 aaPredicted RBP18.85■□□□□ 0.61
HDGFL3-203ENST00000563404 TMEM169Q96HH4 297 aa18.85■□□□□ 0.61
HDGFL3-203ENST00000563404 IGSF21Q96ID5 467 aa18.85■□□□□ 0.61
HDGFL3-203ENST00000563404 NLRP4Q96MN2 994 aa18.85■□□□□ 0.61
HDGFL3-203ENST00000563404 VN1R3Q9BXE9 311 aa18.85■□□□□ 0.61
HDGFL3-203ENST00000563404 IFT122Q9HBG6 1241 aa18.85■□□□□ 0.61
HDGFL3-203ENST00000563404 KCNMB3Q9NPA1 279 aa18.85■□□□□ 0.61
HDGFL3-203ENST00000563404 FAM105AQ9NUU6 356 aa18.85■□□□□ 0.61
HDGFL3-203ENST00000563404 C2CD4DB7Z1M9 353 aa18.84■□□□□ 0.61
HDGFL3-203ENST00000563404 ZNF623O75123 536 aa18.84■□□□□ 0.61
HDGFL3-203ENST00000563404 PDGFBP01127 241 aaPredicted RBP18.84■□□□□ 0.61
HDGFL3-203ENST00000563404 GALTP07902 379 aa18.84■□□□□ 0.61
HDGFL3-203ENST00000563404 CA8P35219 290 aa18.84■□□□□ 0.61
HDGFL3-203ENST00000563404 PPP2R5CQ13362 524 aa18.84■□□□□ 0.61
HDGFL3-203ENST00000563404 LETM2Q2VYF4 491 aa18.84■□□□□ 0.61
HDGFL3-203ENST00000563404 TPRNQ4KMQ1 711 aa18.84■□□□□ 0.61
HDGFL3-203ENST00000563404 NOMO2Q5JPE7 1267 aa18.84■□□□□ 0.61
HDGFL3-203ENST00000563404 GALNT17Q6IS24 598 aa18.84■□□□□ 0.61
HDGFL3-203ENST00000563404 CATSPER4Q7RTX7 472 aa18.84■□□□□ 0.61
HDGFL3-203ENST00000563404 PHF20Q9BVI0 1012 aa18.84■□□□□ 0.61
HDGFL3-203ENST00000563404 TM6SF1Q9BZW5 370 aa18.84■□□□□ 0.61
HDGFL3-203ENST00000563404 INO80BQ9C086 356 aaPredicted RBP18.84■□□□□ 0.61
HDGFL3-203ENST00000563404 CYP26B1Q9NR63 512 aa18.84■□□□□ 0.61
HDGFL3-203ENST00000563404 TSHZ2Q9NRE2 1034 aa18.84■□□□□ 0.61
HDGFL3-203ENST00000563404 GJB4Q9NTQ9 266 aa18.84■□□□□ 0.61
HDGFL3-203ENST00000563404 DNAJB4Q9UDY4 337 aa18.84■□□□□ 0.61
HDGFL3-203ENST00000563404 INPP5FQ9Y2H2 1132 aa18.84■□□□□ 0.61
HDGFL3-203ENST00000563404 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.83■□□□□ 0.6
HDGFL3-203ENST00000563404 EPB41L2O43491 1005 aaKnown RBP18.83■□□□□ 0.6
HDGFL3-203ENST00000563404 CTSAP10619 480 aa18.83■□□□□ 0.6
HDGFL3-203ENST00000563404 EPCAMP16422 314 aa18.83■□□□□ 0.6
HDGFL3-203ENST00000563404 SLC11A1P49279 550 aa18.83■□□□□ 0.6
HDGFL3-203ENST00000563404 AFF1P51825 1210 aaKnown RBP18.83■□□□□ 0.6
HDGFL3-203ENST00000563404 PTPN5P54829 565 aa18.83■□□□□ 0.6
HDGFL3-203ENST00000563404 ITIH3Q06033 890 aa18.83■□□□□ 0.6
HDGFL3-203ENST00000563404 SCRN1Q12765 414 aa18.83■□□□□ 0.6
HDGFL3-203ENST00000563404 RARS2Q5T160 578 aaKnown RBP18.83■□□□□ 0.6
HDGFL3-203ENST00000563404 KRT25Q7Z3Z0 450 aa18.83■□□□□ 0.6
HDGFL3-203ENST00000563404 DDX53Q86TM3 631 aaKnown RBP18.83■□□□□ 0.6
HDGFL3-203ENST00000563404 ZNF280BQ86YH2 543 aa18.83■□□□□ 0.6
HDGFL3-203ENST00000563404 FAM177A1Q8N128 213 aaPredicted RBP18.83■□□□□ 0.6
HDGFL3-203ENST00000563404 KREMEN2Q8NCW0 462 aa18.83■□□□□ 0.6
HDGFL3-203ENST00000563404 SLC22A17Q8WUG5 538 aa18.83■□□□□ 0.6
HDGFL3-203ENST00000563404 HAS1Q92839 578 aa18.83■□□□□ 0.6
HDGFL3-203ENST00000563404 MINDY3Q9H8M7 445 aa18.83■□□□□ 0.6
HDGFL3-203ENST00000563404 IRAK3Q9Y616 596 aa18.83■□□□□ 0.6
HDGFL3-203ENST00000563404 SKIP12755 728 aa18.82■□□□□ 0.6
HDGFL3-203ENST00000563404 QARSP47897 775 aaKnown RBP18.82■□□□□ 0.6
HDGFL3-203ENST00000563404 CES5AQ6NT32 575 aa18.82■□□□□ 0.6
HDGFL3-203ENST00000563404 GLB1LQ6UWU2 654 aa18.82■□□□□ 0.6
HDGFL3-203ENST00000563404 AGMOQ6ZNB7 445 aa18.82■□□□□ 0.6
HDGFL3-203ENST00000563404 OXER1Q8TDS5 423 aa18.82■□□□□ 0.6
HDGFL3-203ENST00000563404 TMEM143Q96AN5 459 aa18.82■□□□□ 0.6
HDGFL3-203ENST00000563404 NECTIN4Q96NY8 510 aa18.82■□□□□ 0.6
HDGFL3-203ENST00000563404 SMOC2Q9H3U7 446 aa18.82■□□□□ 0.6
HDGFL3-203ENST00000563404 DHX33Q9H6R0 707 aaKnown RBP18.82■□□□□ 0.6
HDGFL3-203ENST00000563404 AGPAT5Q9NUQ2 364 aa18.82■□□□□ 0.6
HDGFL3-203ENST00000563404 NR2E1Q9Y466 385 aa18.82■□□□□ 0.6
HDGFL3-203ENST00000563404 PCDHB2Q9Y5E7 798 aa18.82■□□□□ 0.6
HDGFL3-203ENST00000563404 COL4A3BPQ9Y5P4 624 aa18.82■□□□□ 0.6
HDGFL3-203ENST00000563404 DDHD2O94830 711 aa18.81■□□□□ 0.6
HDGFL3-203ENST00000563404 BRD1O95696 1058 aa18.81■□□□□ 0.6
HDGFL3-203ENST00000563404 AVPR2P30518 371 aa18.81■□□□□ 0.6
HDGFL3-203ENST00000563404 HOXA11P31270 313 aaPredicted RBP18.81■□□□□ 0.6
HDGFL3-203ENST00000563404 POLGP54098 1239 aaPredicted RBP18.81■□□□□ 0.6
HDGFL3-203ENST00000563404 EARS2Q5JPH6 523 aaKnown RBP18.81■□□□□ 0.6
HDGFL3-203ENST00000563404 UBXN11Q5T124 520 aa18.81■□□□□ 0.6
HDGFL3-203ENST00000563404 PPP4R3AQ6IN85 833 aa18.81■□□□□ 0.6
HDGFL3-203ENST00000563404 MRPL10Q7Z7H8 261 aaKnown RBP18.81■□□□□ 0.6
HDGFL3-203ENST00000563404 ZBTB33Q86T24 672 aa18.81■□□□□ 0.6
HDGFL3-203ENST00000563404 PRPF31Q8WWY3 499 aaKnown RBP18.81■□□□□ 0.6
HDGFL3-203ENST00000563404 RSPH1Q8WYR4 309 aa18.81■□□□□ 0.6
HDGFL3-203ENST00000563404 GBP3Q9H0R5 595 aa18.81■□□□□ 0.6
HDGFL3-203ENST00000563404 BMP2KQ9NSY1 1161 aaPredicted RBP18.81■□□□□ 0.6
HDGFL3-203ENST00000563404 PDRG1Q9NUG6 133 aa18.81■□□□□ 0.6
HDGFL3-203ENST00000563404 MYO15AQ9UKN7 3530 aa18.8■□□□□ 0.6
HDGFL3-203ENST00000563404 DMDP11532 3685 aa18.8■□□□□ 0.6
HDGFL3-203ENST00000563404 P4HBP07237 508 aaKnown RBP18.8■□□□□ 0.6
HDGFL3-203ENST00000563404 SRGAP2CP0DJJ0 459 aa18.8■□□□□ 0.6
HDGFL3-203ENST00000563404 MTHFRP42898 656 aa18.8■□□□□ 0.6
HDGFL3-203ENST00000563404 RAB27AP51159 221 aa18.8■□□□□ 0.6
HDGFL3-203ENST00000563404 RNASELQ05823 741 aaKnown RBP18.8■□□□□ 0.6
HDGFL3-203ENST00000563404 PTPN14Q15678 1187 aa18.8■□□□□ 0.6
HDGFL3-203ENST00000563404 CPLX2Q6PUV4 134 aaKnown RBP18.8■□□□□ 0.6
HDGFL3-203ENST00000563404 NEK8Q86SG6 692 aa18.8■□□□□ 0.6
HDGFL3-203ENST00000563404 CEP170P1Q96L14 293 aa18.8■□□□□ 0.6
HDGFL3-203ENST00000563404 RIPOR3Q96MK2 946 aa18.8■□□□□ 0.6
HDGFL3-203ENST00000563404 FAM20AQ96MK3 541 aa18.8■□□□□ 0.6
HDGFL3-203ENST00000563404 PRRX2Q99811 253 aa18.8■□□□□ 0.6
HDGFL3-203ENST00000563404 JPH2Q9BR39 696 aaPredicted RBP18.8■□□□□ 0.6
HDGFL3-203ENST00000563404 SLKQ9H2G2 1235 aaPredicted RBP18.8■□□□□ 0.6
HDGFL3-203ENST00000563404 RGL1Q9NZL6 768 aa18.8■□□□□ 0.6
HDGFL3-203ENST00000563404 CCDC194A0A1B0GVG4 234 aa18.79■□□□□ 0.6
HDGFL3-203ENST00000563404 FAM205CA6NFA0 338 aa18.79■□□□□ 0.6
HDGFL3-203ENST00000563404 ZBTB39O15060 712 aa18.79■□□□□ 0.6
HDGFL3-203ENST00000563404 SPIRE1Q08AE8 756 aa18.79■□□□□ 0.6
HDGFL3-203ENST00000563404 LAMTOR4Q0VGL1 99 aa18.79■□□□□ 0.6
HDGFL3-203ENST00000563404 BMS1Q14692 1282 aaKnown RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms