RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 ADKP55263 362 aaKnown RBP5.94□□□□□ -1.46
VPS35P1-201ENST00000563400 DCAF7P61962 342 aa5.94□□□□□ -1.46
VPS35P1-201ENST00000563400 PIP4K2BP78356 416 aa5.94□□□□□ -1.46
VPS35P1-201ENST00000563400 PDE4BQ07343 736 aa5.94□□□□□ -1.46
VPS35P1-201ENST00000563400 CYP4F3Q08477 520 aa5.94□□□□□ -1.46
VPS35P1-201ENST00000563400 PRKG1Q13976 671 aa5.94□□□□□ -1.46
VPS35P1-201ENST00000563400 HSF5Q4G112 596 aaPredicted RBP5.94□□□□□ -1.46
VPS35P1-201ENST00000563400 NUGGCQ68CJ6 796 aa5.94□□□□□ -1.46
VPS35P1-201ENST00000563400 PGBD2Q6P3X8 592 aa5.94□□□□□ -1.46
VPS35P1-201ENST00000563400 PLBD1Q6P4A8 553 aa5.94□□□□□ -1.46
VPS35P1-201ENST00000563400 USP45Q70EL2 814 aa5.94□□□□□ -1.46
VPS35P1-201ENST00000563400 CYFIP1Q7L576 1253 aa5.94□□□□□ -1.46
VPS35P1-201ENST00000563400 MILR1Q7Z6M3 343 aa5.94□□□□□ -1.46
VPS35P1-201ENST00000563400 COLGALT2Q8IYK4 626 aa5.94□□□□□ -1.46
VPS35P1-201ENST00000563400 ANKRD52Q8NB46 1076 aa5.94□□□□□ -1.46
VPS35P1-201ENST00000563400 TRAPPC12Q8WVT3 735 aa5.94□□□□□ -1.46
VPS35P1-201ENST00000563400 LRTOMTQ8WZ04 291 aa5.94□□□□□ -1.46
VPS35P1-201ENST00000563400 ZNF622Q969S3 477 aaKnown RBP eCLIP5.94□□□□□ -1.46
VPS35P1-201ENST00000563400 VMP1Q96GC9 406 aa5.94□□□□□ -1.46
VPS35P1-201ENST00000563400 RADILQ96JH8 1075 aa5.94□□□□□ -1.46
VPS35P1-201ENST00000563400 FMNL2Q96PY5 1086 aa5.94□□□□□ -1.46
VPS35P1-201ENST00000563400 UNKQ9C0B0 810 aaKnown RBP5.94□□□□□ -1.46
VPS35P1-201ENST00000563400 GBP3Q9H0R5 595 aa5.94□□□□□ -1.46
VPS35P1-201ENST00000563400 MAGEH1Q9H213 219 aa5.94□□□□□ -1.46
VPS35P1-201ENST00000563400 ATP8A2Q9NTI2 1148 aa5.94□□□□□ -1.46
VPS35P1-201ENST00000563400 TUBD1Q9UJT1 453 aa5.94□□□□□ -1.46
VPS35P1-201ENST00000563400 SYNPO2Q9UMS6 1093 aa5.94□□□□□ -1.46
VPS35P1-201ENST00000563400 SRPK3Q9UPE1 567 aa5.94□□□□□ -1.46
VPS35P1-201ENST00000563400 CSADQ9Y600 493 aa5.94□□□□□ -1.46
VPS35P1-201ENST00000563400 DLC1Q96QB1 1528 aa5.93□□□□□ -1.46
VPS35P1-201ENST00000563400 KIAA1210Q9ULL0 1709 aa5.93□□□□□ -1.46
VPS35P1-201ENST00000563400 METP08581 1390 aa5.93□□□□□ -1.46
VPS35P1-201ENST00000563400 RGS13O14921 159 aa5.93□□□□□ -1.46
VPS35P1-201ENST00000563400 ESRRAP11474 423 aaPredicted RBP5.93□□□□□ -1.46
VPS35P1-201ENST00000563400 OSMP13725 252 aa5.93□□□□□ -1.46
VPS35P1-201ENST00000563400 IDEP14735 1019 aa5.93□□□□□ -1.46
VPS35P1-201ENST00000563400 CD247P20963 164 aa5.93□□□□□ -1.46
VPS35P1-201ENST00000563400 HTR1BP28222 390 aa5.93□□□□□ -1.46
VPS35P1-201ENST00000563400 RXRBP28702 533 aa5.93□□□□□ -1.46
VPS35P1-201ENST00000563400 ATXN1P54253 815 aaKnown RBP5.93□□□□□ -1.46
VPS35P1-201ENST00000563400 CACNB3P54284 484 aa5.93□□□□□ -1.46
VPS35P1-201ENST00000563400 NR1H2P55055 460 aa5.93□□□□□ -1.46
VPS35P1-201ENST00000563400 ARL4CP56559 192 aa5.93□□□□□ -1.46
VPS35P1-201ENST00000563400 KIF23Q02241 960 aaPredicted RBP5.93□□□□□ -1.46
VPS35P1-201ENST00000563400 STARD3Q14849 445 aa5.93□□□□□ -1.46
VPS35P1-201ENST00000563400 GRIK4Q16099 956 aa5.93□□□□□ -1.46
VPS35P1-201ENST00000563400 UAP1L1Q3KQV9 507 aa5.93□□□□□ -1.46
VPS35P1-201ENST00000563400 CFAP58Q5T655 872 aa5.93□□□□□ -1.46
VPS35P1-201ENST00000563400 JMJD6Q6NYC1 403 aaPredicted RBP5.93□□□□□ -1.46
VPS35P1-201ENST00000563400 RTL10Q7L3V2 364 aa5.93□□□□□ -1.46
VPS35P1-201ENST00000563400 RPAINQ86UA6 219 aa5.93□□□□□ -1.46
VPS35P1-201ENST00000563400 C12orf40Q86WS4 652 aa5.93□□□□□ -1.46
VPS35P1-201ENST00000563400 SYTL1Q8IYJ3 562 aa5.93□□□□□ -1.46
VPS35P1-201ENST00000563400 FMR1NBQ8N0W7 255 aaPredicted RBP5.93□□□□□ -1.46
VPS35P1-201ENST00000563400 ATG16L2Q8NAA4 619 aa5.93□□□□□ -1.46
VPS35P1-201ENST00000563400 FAM13CQ8NE31 585 aa5.93□□□□□ -1.46
VPS35P1-201ENST00000563400 RIN2Q8WYP3 895 aaPredicted RBP5.93□□□□□ -1.46
VPS35P1-201ENST00000563400 TMEM41AQ96HV5 264 aa5.93□□□□□ -1.46
VPS35P1-201ENST00000563400 ASB2Q96Q27 587 aa5.93□□□□□ -1.46
VPS35P1-201ENST00000563400 CDK19Q9BWU1 502 aa5.93□□□□□ -1.46
VPS35P1-201ENST00000563400 DBNDD1Q9H9R9 158 aa5.93□□□□□ -1.46
VPS35P1-201ENST00000563400 WASH6PQ9NQA3 447 aa5.93□□□□□ -1.46
VPS35P1-201ENST00000563400 DNAJC28Q9NX36 388 aa5.93□□□□□ -1.46
VPS35P1-201ENST00000563400 SNX13Q9Y5W8 968 aa5.93□□□□□ -1.46
VPS35P1-201ENST00000563400 ANKARQ7Z5J8 1434 aa5.92□□□□□ -1.46
VPS35P1-201ENST00000563400 PPLO60437 1756 aa5.92□□□□□ -1.46
VPS35P1-201ENST00000563400 USP19O94966 1318 aa5.92□□□□□ -1.46
VPS35P1-201ENST00000563400 A0A1W2PPH5 198 aa5.92□□□□□ -1.46
VPS35P1-201ENST00000563400 ARVCFO00192 962 aa5.92□□□□□ -1.46
VPS35P1-201ENST00000563400 SHOXO15266 292 aa5.92□□□□□ -1.46
VPS35P1-201ENST00000563400 TADA3O75528 432 aa5.92□□□□□ -1.46
VPS35P1-201ENST00000563400 PTPRAP18433 802 aa5.92□□□□□ -1.46
VPS35P1-201ENST00000563400 PLIN5Q00G26 463 aa5.92□□□□□ -1.46
VPS35P1-201ENST00000563400 SRSF2Q01130 221 aaKnown RBP5.92□□□□□ -1.46
VPS35P1-201ENST00000563400 ZNF543Q08ER8 600 aa5.92□□□□□ -1.46
VPS35P1-201ENST00000563400 PKN2Q16513 984 aaKnown RBP5.92□□□□□ -1.46
VPS35P1-201ENST00000563400 GDF6Q6KF10 455 aaPredicted RBP5.92□□□□□ -1.46
VPS35P1-201ENST00000563400 RFX8Q6ZV50 586 aa5.92□□□□□ -1.46
VPS35P1-201ENST00000563400 OVCH1Q7RTY7 1134 aa5.92□□□□□ -1.46
VPS35P1-201ENST00000563400 WAPLQ7Z5K2 1190 aa5.92□□□□□ -1.46
VPS35P1-201ENST00000563400 UBE2Q1Q7Z7E8 422 aa5.92□□□□□ -1.46
VPS35P1-201ENST00000563400 TTC30AQ86WT1 665 aa5.92□□□□□ -1.46
VPS35P1-201ENST00000563400 PRR18Q8N4B5 295 aa5.92□□□□□ -1.46
VPS35P1-201ENST00000563400 ARHGEF39Q8N4T4 335 aa5.92□□□□□ -1.46
VPS35P1-201ENST00000563400 PPM1NQ8N819 430 aa5.92□□□□□ -1.46
VPS35P1-201ENST00000563400 KCNH5Q8NCM2 988 aa5.92□□□□□ -1.46
VPS35P1-201ENST00000563400 SIMC1Q8NDZ2 872 aa5.92□□□□□ -1.46
VPS35P1-201ENST00000563400 AFAP1L1Q8TED9 768 aa5.92□□□□□ -1.46
VPS35P1-201ENST00000563400 DCAF4Q8WV16 495 aa5.92□□□□□ -1.46
VPS35P1-201ENST00000563400 ELMO3Q96BJ8 720 aa5.92□□□□□ -1.46
VPS35P1-201ENST00000563400 LENG1Q96BZ8 264 aaPredicted RBP5.92□□□□□ -1.46
VPS35P1-201ENST00000563400 ADAM19Q9H013 955 aa5.92□□□□□ -1.46
VPS35P1-201ENST00000563400 CHMP4BQ9H444 224 aaKnown RBP5.92□□□□□ -1.46
VPS35P1-201ENST00000563400 IRAK4Q9NWZ3 460 aa5.92□□□□□ -1.46
VPS35P1-201ENST00000563400 CGGBP1Q9UFW8 167 aaPredicted RBP5.92□□□□□ -1.46
VPS35P1-201ENST00000563400 USP21Q9UK80 565 aa5.92□□□□□ -1.46
VPS35P1-201ENST00000563400 SOX13Q9UN79 622 aa5.92□□□□□ -1.46
VPS35P1-201ENST00000563400 NOC2LQ9Y3T9 749 aaKnown RBP5.92□□□□□ -1.46
VPS35P1-201ENST00000563400 ADGRL3Q9HAR2 1447 aa5.92□□□□□ -1.46
VPS35P1-201ENST00000563400 SPATA31A6Q5VVP1 1343 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms