RNA–Protein interactions for RNA: ENST00000563275.1

PKM-208, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 699 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-208ENST00000563275 CATSPER4Q7RTX7 472 aa14□□□□□ -0.17
PKM-208ENST00000563275 MRPL10Q7Z7H8 261 aaKnown RBP14□□□□□ -0.17
PKM-208ENST00000563275 CATSPER3Q86XQ3 398 aa14□□□□□ -0.17
PKM-208ENST00000563275 FAM178BQ8IXR5 827 aa14□□□□□ -0.17
PKM-208ENST00000563275 SLC39A11Q8N1S5 342 aa14□□□□□ -0.17
PKM-208ENST00000563275 EFHBQ8N7U6 833 aa14□□□□□ -0.17
PKM-208ENST00000563275 MSLNLQ96KJ4 702 aa14□□□□□ -0.17
PKM-208ENST00000563275 POLR3CQ9BUI4 534 aaPredicted RBP14□□□□□ -0.17
PKM-208ENST00000563275 NFKBIZQ9BYH8 718 aa14□□□□□ -0.17
PKM-208ENST00000563275 TUFT1Q9NNX1 390 aa14□□□□□ -0.17
PKM-208ENST00000563275 TLR9Q9NR96 1032 aa14□□□□□ -0.17
PKM-208ENST00000563275 CLDND1Q9NY35 253 aa14□□□□□ -0.17
PKM-208ENST00000563275 LINC01565O15544 149 aa13.99□□□□□ -0.17
PKM-208ENST00000563275 MED24O75448 989 aa13.99□□□□□ -0.17
PKM-208ENST00000563275 GLP2RO95838 553 aa13.99□□□□□ -0.17
PKM-208ENST00000563275 SRGAP2CP0DJJ0 459 aa13.99□□□□□ -0.17
PKM-208ENST00000563275 PPM1AP35813 382 aa13.99□□□□□ -0.17
PKM-208ENST00000563275 ERVFC1P60507 584 aa13.99□□□□□ -0.17
PKM-208ENST00000563275 KCNC3Q14003 757 aa13.99□□□□□ -0.17
PKM-208ENST00000563275 MXD4Q14582 209 aaPredicted RBP13.99□□□□□ -0.17
PKM-208ENST00000563275 AMHR2Q16671 573 aa13.99□□□□□ -0.17
PKM-208ENST00000563275 TTC38Q5R3I4 469 aa13.99□□□□□ -0.17
PKM-208ENST00000563275 TWF2Q6IBS0 349 aaKnown RBP13.99□□□□□ -0.17
PKM-208ENST00000563275 PDE12Q6L8Q7 609 aaKnown RBP13.99□□□□□ -0.17
PKM-208ENST00000563275 THNSL1Q8IYQ7 743 aa13.99□□□□□ -0.17
PKM-208ENST00000563275 ABI1Q8IZP0 508 aa13.99□□□□□ -0.17
PKM-208ENST00000563275 RNF149Q8NC42 400 aa13.99□□□□□ -0.17
PKM-208ENST00000563275 HELQQ8TDG4 1101 aa13.99□□□□□ -0.17
PKM-208ENST00000563275 ASAP3Q8TDY4 903 aa13.99□□□□□ -0.17
PKM-208ENST00000563275 MRPS27Q92552 414 aaKnown RBP13.99□□□□□ -0.17
PKM-208ENST00000563275 TBC1D32Q96NH3 1257 aa13.99□□□□□ -0.17
PKM-208ENST00000563275 MRPL9Q9BYD2 267 aaKnown RBP13.99□□□□□ -0.17
PKM-208ENST00000563275 BMP2KQ9NSY1 1161 aaPredicted RBP13.99□□□□□ -0.17
PKM-208ENST00000563275 CLEC1BQ9P126 229 aa13.99□□□□□ -0.17
PKM-208ENST00000563275 DBR1Q9UK59 544 aaKnown RBP13.99□□□□□ -0.17
PKM-208ENST00000563275 INPPL1O15357 1258 aa13.98□□□□□ -0.17
PKM-208ENST00000563275 TSPAN1O60635 241 aa13.98□□□□□ -0.17
PKM-208ENST00000563275 OFD1O75665 1012 aa13.98□□□□□ -0.17
PKM-208ENST00000563275 EYA4O95677 639 aa13.98□□□□□ -0.17
PKM-208ENST00000563275 ATP2B1P20020 1258 aa13.98□□□□□ -0.17
PKM-208ENST00000563275 GLRA2P23416 452 aa13.98□□□□□ -0.17
PKM-208ENST00000563275 RPA1P27694 616 aa13.98□□□□□ -0.17
PKM-208ENST00000563275 PBX3P40426 434 aa13.98□□□□□ -0.17
PKM-208ENST00000563275 FXR2P51116 673 aaKnown RBP eCLIP13.98□□□□□ -0.178e-8■□□□□ 9.8
PKM-208ENST00000563275 CAPSQ13938 189 aa13.98□□□□□ -0.17
PKM-208ENST00000563275 ZNF174Q15697 407 aa13.98□□□□□ -0.17
PKM-208ENST00000563275 DUSP6Q16828 381 aa13.98□□□□□ -0.17
PKM-208ENST00000563275 SPOUT1Q5T280 376 aaKnown RBP13.98□□□□□ -0.17
PKM-208ENST00000563275 FAM184AQ8NB25 1140 aa13.98□□□□□ -0.17
PKM-208ENST00000563275 RNF169Q8NCN4 708 aa13.98□□□□□ -0.17
PKM-208ENST00000563275 PIGOQ8TEQ8 1089 aa13.98□□□□□ -0.17
PKM-208ENST00000563275 KHSRPQ92945 711 aaKnown RBP eCLIP13.98□□□□□ -0.17
PKM-208ENST00000563275 LPPQ93052 612 aa13.98□□□□□ -0.17
PKM-208ENST00000563275 PPP2R3CQ969Q6 453 aa13.98□□□□□ -0.17
PKM-208ENST00000563275 TMX3Q96JJ7 454 aa13.98□□□□□ -0.17
PKM-208ENST00000563275 ZNF558Q96NG5 402 aa13.98□□□□□ -0.17
PKM-208ENST00000563275 PCDHB2Q9Y5E7 798 aa13.98□□□□□ -0.17
PKM-208ENST00000563275 A0A087WWV3 80 aa13.97□□□□□ -0.17
PKM-208ENST00000563275 C19orf67A6NJJ6 358 aa13.97□□□□□ -0.17
PKM-208ENST00000563275 ST18O60284 1047 aa13.97□□□□□ -0.17
PKM-208ENST00000563275 B4GALT3O60512 393 aa13.97□□□□□ -0.17
PKM-208ENST00000563275 CSPG5O95196 566 aa13.97□□□□□ -0.17
PKM-208ENST00000563275 NCLP19338 710 aaKnown RBP13.97□□□□□ -0.17
PKM-208ENST00000563275 MUTP22033 750 aa13.97□□□□□ -0.17
PKM-208ENST00000563275 AXLP30530 894 aa13.97□□□□□ -0.17
PKM-208ENST00000563275 TECP42680 631 aa13.97□□□□□ -0.17
PKM-208ENST00000563275 NRIP1P48552 1158 aa13.97□□□□□ -0.17
PKM-208ENST00000563275 ZP2Q05996 745 aa13.97□□□□□ -0.17
PKM-208ENST00000563275 MBTD1Q05BQ5 628 aa13.97□□□□□ -0.17
PKM-208ENST00000563275 COASYQ13057 564 aa13.97□□□□□ -0.17
PKM-208ENST00000563275 SMAD4Q13485 552 aaKnown RBP13.97□□□□□ -0.17
PKM-208ENST00000563275 NBR1Q14596 966 aa13.97□□□□□ -0.17
PKM-208ENST00000563275 SMAD2Q15796 467 aaKnown RBP13.97□□□□□ -0.17
PKM-208ENST00000563275 TMEM184AQ6ZMB5 413 aa13.97□□□□□ -0.17
PKM-208ENST00000563275 AGMOQ6ZNB7 445 aa13.97□□□□□ -0.17
PKM-208ENST00000563275 SMRP1Q8NCR6 262 aa13.97□□□□□ -0.17
PKM-208ENST00000563275 VN1R2Q8NFZ6 395 aa13.97□□□□□ -0.17
PKM-208ENST00000563275 CCDC51Q96ER9 411 aa13.97□□□□□ -0.17
PKM-208ENST00000563275 CDCA3Q99618 268 aaPredicted RBP13.97□□□□□ -0.17
PKM-208ENST00000563275 TBC1D13Q9NVG8 400 aa13.97□□□□□ -0.17
PKM-208ENST00000563275 SPG21Q9NZD8 308 aa13.97□□□□□ -0.17
PKM-208ENST00000563275 PRKAG3Q9UGI9 489 aa13.97□□□□□ -0.17
PKM-208ENST00000563275 MBTPS2O43462 519 aa13.96□□□□□ -0.17
PKM-208ENST00000563275 AFF1P51825 1210 aaKnown RBP13.96□□□□□ -0.17
PKM-208ENST00000563275 BCAR1P56945 870 aa13.96□□□□□ -0.17
PKM-208ENST00000563275 TFDP1Q14186 410 aa13.96□□□□□ -0.17
PKM-208ENST00000563275 NOMO2Q5JPE7 1267 aa13.96□□□□□ -0.17
PKM-208ENST00000563275 CDCA2Q69YH5 1023 aaPredicted RBP13.96□□□□□ -0.17
PKM-208ENST00000563275 POTEGQ6S5H5 508 aa13.96□□□□□ -0.17
PKM-208ENST00000563275 GLB1LQ6UWU2 654 aa13.96□□□□□ -0.17
PKM-208ENST00000563275 TMEM173Q86WV6 379 aaPredicted RBP13.96□□□□□ -0.17
PKM-208ENST00000563275 GJD3Q8N144 294 aa13.96□□□□□ -0.17
PKM-208ENST00000563275 IGSF22Q8N9C0 903 aa13.96□□□□□ -0.17
PKM-208ENST00000563275 SMG8Q8ND04 991 aaKnown RBP13.96□□□□□ -0.17
PKM-208ENST00000563275 NACC1Q96RE7 527 aa13.96□□□□□ -0.17
PKM-208ENST00000563275 IGFLR1Q9H665 355 aa13.96□□□□□ -0.17
PKM-208ENST00000563275 NRDE2Q9H7Z3 1164 aa13.96□□□□□ -0.17
PKM-208ENST00000563275 TLE6Q9H808 572 aa13.96□□□□□ -0.17
PKM-208ENST00000563275 NGRNQ9NPE2 291 aaKnown RBP13.96□□□□□ -0.17
PKM-208ENST00000563275 GPRC5CQ9NQ84 441 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms