RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 SIRPGQ9P1W8 387 aa4.75□□□□□ -1.65
DENND4A-205ENST00000562540 TRIM24O15164 1050 aa4.74□□□□□ -1.65
DENND4A-205ENST00000562540 STC2O76061 302 aa4.74□□□□□ -1.65
DENND4A-205ENST00000562540 ERBB2P04626 1255 aa4.74□□□□□ -1.65
DENND4A-205ENST00000562540 KCNA6P17658 529 aa4.74□□□□□ -1.65
DENND4A-205ENST00000562540 ATP2B1P20020 1258 aa4.74□□□□□ -1.65
DENND4A-205ENST00000562540 KIR2DL3P43628 341 aa4.74□□□□□ -1.65
DENND4A-205ENST00000562540 FGD2Q7Z6J4 655 aa4.74□□□□□ -1.65
DENND4A-205ENST00000562540 SREK1Q8WXA9 508 aaKnown RBP4.74□□□□□ -1.65
DENND4A-205ENST00000562540 BBC3Q96PG8 261 aaPredicted RBP4.74□□□□□ -1.65
DENND4A-205ENST00000562540 TOR3AQ9H497 397 aa4.74□□□□□ -1.65
DENND4A-205ENST00000562540 SYNPO2Q9UMS6 1093 aa4.74□□□□□ -1.65
DENND4A-205ENST00000562540 M0R2C6 588 aa4.73□□□□□ -1.65
DENND4A-205ENST00000562540 MTSS1O43312 755 aa4.73□□□□□ -1.65
DENND4A-205ENST00000562540 LAG3P18627 525 aa4.73□□□□□ -1.65
DENND4A-205ENST00000562540 BCAR1P56945 870 aa4.73□□□□□ -1.65
DENND4A-205ENST00000562540 FAM214AQ32MH5 1076 aa4.73□□□□□ -1.65
DENND4A-205ENST00000562540 OLFML1Q6UWY5 402 aa4.73□□□□□ -1.65
DENND4A-205ENST00000562540 DDX53Q86TM3 631 aaKnown RBP4.73□□□□□ -1.65
DENND4A-205ENST00000562540 CXorf67Q86X51 503 aaPredicted RBP4.73□□□□□ -1.65
DENND4A-205ENST00000562540 MRPL4Q9BYD3 311 aaKnown RBP4.73□□□□□ -1.65
DENND4A-205ENST00000562540 HAPLN2Q9GZV7 340 aa4.73□□□□□ -1.65
DENND4A-205ENST00000562540 EIF2B4Q9UI10 523 aaKnown RBP4.73□□□□□ -1.65
DENND4A-205ENST00000562540 DVL2O14641 736 aa4.72□□□□□ -1.65
DENND4A-205ENST00000562540 KIAA0355O15063 1070 aa4.72□□□□□ -1.65
DENND4A-205ENST00000562540 ZFP36P26651 326 aaKnown RBP4.72□□□□□ -1.65
DENND4A-205ENST00000562540 CD38P28907 300 aa4.72□□□□□ -1.65
DENND4A-205ENST00000562540 MECP2P51608 486 aaKnown RBP4.72□□□□□ -1.65
DENND4A-205ENST00000562540 MYBPC3Q14896 1274 aa4.72□□□□□ -1.65
DENND4A-205ENST00000562540 NME9Q86XW9 330 aa4.72□□□□□ -1.65
DENND4A-205ENST00000562540 CHST14Q8NCH0 376 aa4.72□□□□□ -1.65
DENND4A-205ENST00000562540 C16orf92Q96LL3 132 aa4.72□□□□□ -1.65
DENND4A-205ENST00000562540 UIMC1Q96RL1 719 aa4.72□□□□□ -1.65
DENND4A-205ENST00000562540 CPPED1Q9BRF8 314 aaPredicted RBP4.72□□□□□ -1.65
DENND4A-205ENST00000562540 EPC1Q9H2F5 836 aa4.72□□□□□ -1.65
DENND4A-205ENST00000562540 ZNF768Q9H5H4 540 aaKnown RBP4.72□□□□□ -1.65
DENND4A-205ENST00000562540 CENPVL1A0A0U1RR11 272 aa4.71□□□□□ -1.66
DENND4A-205ENST00000562540 H7C1D1 291 aa4.71□□□□□ -1.66
DENND4A-205ENST00000562540 NRP1O14786 923 aa4.71□□□□□ -1.66
DENND4A-205ENST00000562540 MAFGO15525 162 aa4.71□□□□□ -1.66
DENND4A-205ENST00000562540 KCNQ2O43526 872 aa4.71□□□□□ -1.66
DENND4A-205ENST00000562540 CYP17A1P05093 508 aa4.71□□□□□ -1.66
DENND4A-205ENST00000562540 ZNF37AP17032 561 aaPredicted RBP4.71□□□□□ -1.66
DENND4A-205ENST00000562540 ITGB6P18564 788 aa4.71□□□□□ -1.66
DENND4A-205ENST00000562540 GTF2F1P35269 517 aaKnown RBP eCLIP4.71□□□□□ -1.66
DENND4A-205ENST00000562540 TAP1Q03518 808 aa4.71□□□□□ -1.66
DENND4A-205ENST00000562540 RASA3Q14644 834 aa4.71□□□□□ -1.66
DENND4A-205ENST00000562540 EPHA7Q15375 998 aa4.71□□□□□ -1.66
DENND4A-205ENST00000562540 ZNF174Q15697 407 aa4.71□□□□□ -1.66
DENND4A-205ENST00000562540 MAN2A1Q16706 1144 aa4.71□□□□□ -1.66
DENND4A-205ENST00000562540 Q6YL49 198 aa4.71□□□□□ -1.66
DENND4A-205ENST00000562540 KIAA1958Q8N8K9 716 aa4.71□□□□□ -1.66
DENND4A-205ENST00000562540 SUPT20HQ8NEM7 779 aa4.71□□□□□ -1.66
DENND4A-205ENST00000562540 DEPDC7Q96QD5 511 aa4.71□□□□□ -1.66
DENND4A-205ENST00000562540 SLC46A2Q9BY10 475 aa4.71□□□□□ -1.66
DENND4A-205ENST00000562540 KCNH6Q9H252 994 aa4.71□□□□□ -1.66
DENND4A-205ENST00000562540 SYNPO2LQ9H987 977 aa4.71□□□□□ -1.66
DENND4A-205ENST00000562540 TRIM39Q9HCM9 518 aa4.71□□□□□ -1.66
DENND4A-205ENST00000562540 TNPO3Q9Y5L0 923 aaKnown RBP4.71□□□□□ -1.66
DENND4A-205ENST00000562540 COL4A3Q01955 1670 aa4.7□□□□□ -1.66
DENND4A-205ENST00000562540 A0A0A6YYK5 440 aaPredicted RBP4.7□□□□□ -1.66
DENND4A-205ENST00000562540 CCDC163A0A0D9SF12 145 aa4.7□□□□□ -1.66
DENND4A-205ENST00000562540 LPXNO60711 386 aa4.7□□□□□ -1.66
DENND4A-205ENST00000562540 GLRX3O76003 335 aaKnown RBP4.7□□□□□ -1.66
DENND4A-205ENST00000562540 FSBPO95073 299 aa4.7□□□□□ -1.66
DENND4A-205ENST00000562540 APOL3O95236 402 aa4.7□□□□□ -1.66
DENND4A-205ENST00000562540 USP14P54578 494 aa4.7□□□□□ -1.66
DENND4A-205ENST00000562540 ADCY2Q08462 1091 aa4.7□□□□□ -1.66
DENND4A-205ENST00000562540 KRTAP5-11Q6L8G4 156 aa4.7□□□□□ -1.66
DENND4A-205ENST00000562540 C7orf31Q8N865 590 aa4.7□□□□□ -1.66
DENND4A-205ENST00000562540 ZSWIM2Q8NEG5 633 aa4.7□□□□□ -1.66
DENND4A-205ENST00000562540 ARMC5Q96C12 935 aa4.7□□□□□ -1.66
DENND4A-205ENST00000562540 MYEOVQ96EZ4 313 aa4.7□□□□□ -1.66
DENND4A-205ENST00000562540 OSBPL6Q9BZF3 934 aa4.7□□□□□ -1.66
DENND4A-205ENST00000562540 PITHD1Q9GZP4 211 aaPredicted RBP4.7□□□□□ -1.66
DENND4A-205ENST00000562540 MTG2Q9H4K7 406 aa4.7□□□□□ -1.66
DENND4A-205ENST00000562540 SAMD15Q9P1V8 674 aa4.7□□□□□ -1.66
DENND4A-205ENST00000562540 A0A0A6YYJ9 748 aa4.69□□□□□ -1.66
DENND4A-205ENST00000562540 PTPDC1A2A3K4 754 aa4.69□□□□□ -1.66
DENND4A-205ENST00000562540 FAM221BA6H8Z2 402 aa4.69□□□□□ -1.66
DENND4A-205ENST00000562540 AHRRA9YTQ3 701 aa4.69□□□□□ -1.66
DENND4A-205ENST00000562540 B4E1Z4 1266 aa4.69□□□□□ -1.66
DENND4A-205ENST00000562540 HOXA3O43365 443 aaPredicted RBP4.69□□□□□ -1.66
DENND4A-205ENST00000562540 PTX3P26022 381 aaPredicted RBP4.69□□□□□ -1.66
DENND4A-205ENST00000562540 ZEB1P37275 1124 aaPredicted RBP4.69□□□□□ -1.66
DENND4A-205ENST00000562540 COLEC12Q5KU26 742 aa4.69□□□□□ -1.66
DENND4A-205ENST00000562540 IQSEC1Q6DN90 963 aa4.69□□□□□ -1.66
DENND4A-205ENST00000562540 TIGD7Q6NT04 549 aaPredicted RBP4.69□□□□□ -1.66
DENND4A-205ENST00000562540 ZCCHC8Q6NZY4 707 aaKnown RBP4.69□□□□□ -1.66
DENND4A-205ENST00000562540 RD3Q7Z3Z2 195 aa4.69□□□□□ -1.66
DENND4A-205ENST00000562540 LRP10Q7Z4F1 713 aa4.69□□□□□ -1.66
DENND4A-205ENST00000562540 GLB1L3Q8NCI6 653 aaPredicted RBP4.69□□□□□ -1.66
DENND4A-205ENST00000562540 OR52N2Q8NGI0 321 aa4.69□□□□□ -1.66
DENND4A-205ENST00000562540 PDCD2LQ9BRP1 358 aa4.69□□□□□ -1.66
DENND4A-205ENST00000562540 HIRIP3Q9BW71 556 aaPredicted RBP4.69□□□□□ -1.66
DENND4A-205ENST00000562540 CPEB1Q9BZB8 566 aaKnown RBP4.69□□□□□ -1.66
DENND4A-205ENST00000562540 WDR11Q9BZH6 1224 aa4.69□□□□□ -1.66
DENND4A-205ENST00000562540 SERHL2Q9H4I8 314 aa4.69□□□□□ -1.66
DENND4A-205ENST00000562540 CABP5Q9NP86 173 aa4.69□□□□□ -1.66
DENND4A-205ENST00000562540 ING3Q9NXR8 418 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms