RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 HAS1Q92839 578 aa18.71■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 TMEM169Q96HH4 297 aa18.71■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 FAM20AQ96MK3 541 aa18.71■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 JPH2Q9BR39 696 aaPredicted RBP18.71■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 ZBP1Q9H171 429 aa18.71■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 NRDE2Q9H7Z3 1164 aa18.71■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 AGPAT5Q9NUQ2 364 aa18.71■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 COL4A3BPQ9Y5P4 624 aa18.71■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 KMT2EQ8IZD2 1858 aa18.71■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 STK36Q9NRP7 1315 aa18.71■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 B4GALT3O60512 393 aa18.7■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 ZNF623O75123 536 aa18.7■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 OFD1O75665 1012 aa18.7■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 CDKL5O76039 1030 aa18.7■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 CXCL14O95715 111 aa18.7■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 SKIP12755 728 aa18.7■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 CA8P35219 290 aa18.7■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 MRE11P49959 708 aa18.7■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 SIGLEC14Q08ET2 396 aa18.7■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 PTPN21Q16825 1174 aa18.7■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 NOMO2Q5JPE7 1267 aa18.7■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 EARS2Q5JPH6 523 aaKnown RBP18.7■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 GLB1LQ6UWU2 654 aa18.7■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 PIK3AP1Q6ZUJ8 805 aa18.7■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 VPS52Q8N1B4 723 aa18.7■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 PRSS33Q8NF86 280 aa18.7■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 SLC7A3Q8WY07 619 aa18.7■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 ASIC4Q96FT7 647 aa18.7■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 IGSF21Q96ID5 467 aa18.7■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 CEP170P1Q96L14 293 aa18.7■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 SLKQ9H2G2 1235 aaPredicted RBP18.7■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 DHX33Q9H6R0 707 aaKnown RBP18.7■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 MINDY3Q9H8M7 445 aa18.7■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 DNAJB4Q9UDY4 337 aa18.7■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 TPCN1Q9ULQ1 816 aa18.7■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 INPP5FQ9Y2H2 1132 aa18.7■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 ARID2Q68CP9 1835 aa18.7■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 CCNT1O60563 726 aaKnown RBP18.69■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 CTDNEP1O95476 244 aa18.69■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 P4HBP07237 508 aaKnown RBP18.69■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 GALTP07902 379 aa18.69■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 GCFC2P16383 781 aaKnown RBP18.69■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 RAB27AP51159 221 aa18.69■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 TPRNQ4KMQ1 711 aa18.69■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 DDX53Q86TM3 631 aaKnown RBP18.69■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 PRPF31Q8WWY3 499 aaKnown RBP18.69■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 TMEM143Q96AN5 459 aa18.69■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 VN1R3Q9BXE9 311 aa18.69■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 ADAM7Q9H2U9 754 aa18.69■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 POMKQ9H5K3 350 aa18.69■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 BMP2KQ9NSY1 1161 aaPredicted RBP18.69■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 PCDHB2Q9Y5E7 798 aa18.69■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.68■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 FAM205CA6NFA0 338 aa18.68■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 TBX3O15119 743 aa18.68■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 PFKFB2O60825 505 aa18.68■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 CTSAP10619 480 aa18.68■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 AFF1P51825 1210 aaKnown RBP18.68■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 POLGP54098 1239 aaPredicted RBP18.68■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 ITIH3Q06033 890 aa18.68■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 SPIRE1Q08AE8 756 aa18.68■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 AGMOQ6ZNB7 445 aa18.68■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 ZNF280BQ86YH2 543 aa18.68■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 POTEDQ86YR6 584 aa18.68■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 FBXL6Q8N531 539 aa18.68■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 LXNQ9BS40 222 aa18.68■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 TSHZ2Q9NRE2 1034 aa18.68■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 RGL1Q9NZL6 768 aa18.68■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 IRAK3Q9Y616 596 aa18.68■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 ZBTB39O15060 712 aa18.67■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 DKC1O60832 514 aaKnown RBP eCLIP18.67■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 WEE2P0C1S8 567 aa18.67■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 SRGAP2CP0DJJ0 459 aa18.67■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 EPCAMP16422 314 aa18.67■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 HOXA11P31270 313 aaPredicted RBP18.67■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 YWHABP31946 246 aaKnown RBP18.67■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 RFC5P40937 340 aa18.67■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 SLC11A1P49279 550 aa18.67■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 RNASELQ05823 741 aaKnown RBP18.67■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 LAMTOR4Q0VGL1 99 aa18.67■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 EPHA7Q15375 998 aa18.67■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 UBXN11Q5T124 520 aa18.67■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 CES5AQ6NT32 575 aa18.67■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 KANK3Q6NY19 840 aa18.67■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 SUGP1Q8IWZ8 645 aaKnown RBP18.67■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 C4orf19Q8IY42 314 aa18.67■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 C12orf76Q8N812 135 aaPredicted RBP18.67■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 FEZF2Q8TBJ5 459 aa18.67■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 PSPC1Q8WXF1 523 aaKnown RBP18.67■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 NECTIN4Q96NY8 510 aa18.67■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 GBP3Q9H0R5 595 aa18.67■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 PPME1Q9Y570 386 aa18.67■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 MYO15AQ9UKN7 3530 aa18.67■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 PIEZO1Q92508 2521 aa18.66■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 C2CD4DB7Z1M9 353 aa18.66■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 DDHD2O94830 711 aa18.66■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 XBP1P17861 261 aa18.66■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 NR5A1Q13285 461 aa18.66■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 BMS1Q14692 1282 aaKnown RBP18.66■□□□□ 0.58
VPS9D1-AS1-201ENST00000562298 EMC2Q15006 297 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms