RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 KIAA1671Q9BY89 1806 aa14.85□□□□□ -0.03
CDH1-204ENST00000562118 MYMKA6NI61 221 aa14.85□□□□□ -0.03
CDH1-204ENST00000562118 ACTN4O43707 911 aaKnown RBP14.85□□□□□ -0.03
CDH1-204ENST00000562118 SRGAP2CP0DJJ0 459 aa14.85□□□□□ -0.03
CDH1-204ENST00000562118 PLS3P13797 630 aa14.85□□□□□ -0.03
CDH1-204ENST00000562118 PFKFB1P16118 471 aa14.85□□□□□ -0.03
CDH1-204ENST00000562118 SCP2P22307 547 aa14.85□□□□□ -0.03
CDH1-204ENST00000562118 STAT6P42226 847 aa14.85□□□□□ -0.03
CDH1-204ENST00000562118 NPTX2P47972 431 aa14.85□□□□□ -0.03
CDH1-204ENST00000562118 HTRA4P83105 476 aaPredicted RBP14.85□□□□□ -0.03
CDH1-204ENST00000562118 ZRSR1Q15695 479 aaKnown RBP14.85□□□□□ -0.03
CDH1-204ENST00000562118 GPBP1Q86WP2 473 aa14.85□□□□□ -0.03
CDH1-204ENST00000562118 IQUBQ8NA54 791 aa14.85□□□□□ -0.03
CDH1-204ENST00000562118 SP7Q8TDD2 431 aaPredicted RBP14.85□□□□□ -0.03
CDH1-204ENST00000562118 ZNF668Q96K58 619 aaPredicted RBP14.85□□□□□ -0.03
CDH1-204ENST00000562118 C2orf40Q9H1Z8 148 aa14.85□□□□□ -0.03
CDH1-204ENST00000562118 ST6GALNAC4Q9H4F1 302 aa14.85□□□□□ -0.03
CDH1-204ENST00000562118 C1orf112Q9NSG2 853 aa14.85□□□□□ -0.03
CDH1-204ENST00000562118 KCNH3Q9ULD8 1083 aa14.85□□□□□ -0.03
CDH1-204ENST00000562118 GINS2Q9Y248 185 aa14.85□□□□□ -0.03
CDH1-204ENST00000562118 SLC4A7Q9Y6M7 1214 aa14.85□□□□□ -0.03
CDH1-204ENST00000562118 NLRC5Q86WI3 1866 aa14.84□□□□□ -0.03
CDH1-204ENST00000562118 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.84□□□□□ -0.03
CDH1-204ENST00000562118 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.84□□□□□ -0.03
CDH1-204ENST00000562118 SOX1O00570 391 aaPredicted RBP14.84□□□□□ -0.03
CDH1-204ENST00000562118 TSPAN1O60635 241 aa14.84□□□□□ -0.03
CDH1-204ENST00000562118 GJB5O95377 273 aa14.84□□□□□ -0.03
CDH1-204ENST00000562118 ATP2A2P16615 1042 aaKnown RBP14.84□□□□□ -0.03
CDH1-204ENST00000562118 NCLP19338 710 aaKnown RBP14.84□□□□□ -0.03
CDH1-204ENST00000562118 AXLP30530 894 aa14.84□□□□□ -0.03
CDH1-204ENST00000562118 NCKAP1LP55160 1127 aa14.84□□□□□ -0.03
CDH1-204ENST00000562118 SV2BQ7L1I2 683 aa14.84□□□□□ -0.03
CDH1-204ENST00000562118 TAS1R3Q7RTX0 852 aa14.84□□□□□ -0.03
CDH1-204ENST00000562118 ZNF598Q86UK7 904 aaKnown RBP14.84□□□□□ -0.03
CDH1-204ENST00000562118 HERC6Q8IVU3 1022 aa14.84□□□□□ -0.03
CDH1-204ENST00000562118 ZNF689Q96CS4 500 aaPredicted RBP14.84□□□□□ -0.03
CDH1-204ENST00000562118 CCDC51Q96ER9 411 aa14.84□□□□□ -0.03
CDH1-204ENST00000562118 GOLPH3LQ9H4A5 285 aa14.84□□□□□ -0.03
CDH1-204ENST00000562118 TMEM134Q9H6X4 195 aa14.84□□□□□ -0.03
CDH1-204ENST00000562118 ELAC1Q9H777 363 aaKnown RBP14.84□□□□□ -0.03
CDH1-204ENST00000562118 GDPD2Q9HCC8 539 aa14.84□□□□□ -0.03
CDH1-204ENST00000562118 FAM13BQ9NYF5 915 aa14.84□□□□□ -0.03
CDH1-204ENST00000562118 USP25Q9UHP3 1055 aa14.84□□□□□ -0.03
CDH1-204ENST00000562118 KCNG1Q9UIX4 513 aa14.84□□□□□ -0.03
CDH1-204ENST00000562118 PHLPP2Q6ZVD8 1323 aa14.84□□□□□ -0.03
CDH1-204ENST00000562118 CNTNAP2Q9UHC6 1331 aa14.84□□□□□ -0.03
CDH1-204ENST00000562118 NPHP3-ACAD11A0A0J9YXS1 232 aa14.83□□□□□ -0.04
CDH1-204ENST00000562118 POLR2DO15514 142 aaKnown RBP14.83□□□□□ -0.04
CDH1-204ENST00000562118 ZNF623O75123 536 aa14.83□□□□□ -0.04
CDH1-204ENST00000562118 CSDE1O75534 798 aaKnown RBP14.83□□□□□ -0.04
CDH1-204ENST00000562118 PPP1R37O75864 691 aa14.83□□□□□ -0.04
CDH1-204ENST00000562118 AMHP03971 560 aa14.83□□□□□ -0.04
CDH1-204ENST00000562118 EDN1P05305 212 aa14.83□□□□□ -0.04
CDH1-204ENST00000562118 SLFN14P0C7P3 912 aa14.83□□□□□ -0.04
CDH1-204ENST00000562118 MAPTP10636 758 aaKnown RBP14.83□□□□□ -0.04
CDH1-204ENST00000562118 FGFR4P22455 802 aa14.83□□□□□ -0.04
CDH1-204ENST00000562118 SARSP49591 514 aaKnown RBP14.83□□□□□ -0.04
CDH1-204ENST00000562118 EFNA5P52803 228 aa14.83□□□□□ -0.04
CDH1-204ENST00000562118 EHHADHQ08426 723 aa14.83□□□□□ -0.04
CDH1-204ENST00000562118 DMP1Q13316 513 aaPredicted RBP14.83□□□□□ -0.04
CDH1-204ENST00000562118 UBXN11Q5T124 520 aa14.83□□□□□ -0.04
CDH1-204ENST00000562118 SLC24A5Q71RS6 500 aa14.83□□□□□ -0.04
CDH1-204ENST00000562118 MAEAQ7L5Y9 396 aa14.83□□□□□ -0.04
CDH1-204ENST00000562118 TMEM161BQ8NDZ6 487 aa14.83□□□□□ -0.04
CDH1-204ENST00000562118 ENGASEQ8NFI3 743 aa14.83□□□□□ -0.04
CDH1-204ENST00000562118 RASSF8Q8NHQ8 419 aa14.83□□□□□ -0.04
CDH1-204ENST00000562118 MRPS27Q92552 414 aaKnown RBP14.83□□□□□ -0.04
CDH1-204ENST00000562118 DDX12PQ92771 950 aa14.83□□□□□ -0.04
CDH1-204ENST00000562118 IFT74Q96LB3 600 aa14.83□□□□□ -0.04
CDH1-204ENST00000562118 C7orf25Q9BPX7 421 aa14.83□□□□□ -0.04
CDH1-204ENST00000562118 STRA6Q9BX79 667 aa14.83□□□□□ -0.04
CDH1-204ENST00000562118 TRIM9Q9C026 710 aa14.83□□□□□ -0.04
CDH1-204ENST00000562118 PRMT7Q9NVM4 692 aaPredicted RBP14.83□□□□□ -0.04
CDH1-204ENST00000562118 PCDHA11Q9Y5I1 949 aa14.83□□□□□ -0.04
CDH1-204ENST00000562118 TMEM265A0A087WTH1 108 aa14.82□□□□□ -0.04
CDH1-204ENST00000562118 A0A0U1RQF3 1178 aa14.82□□□□□ -0.04
CDH1-204ENST00000562118 A0A1B0GUA9 196 aa14.82□□□□□ -0.04
CDH1-204ENST00000562118 LRRIQ4A6NIV6 560 aa14.82□□□□□ -0.04
CDH1-204ENST00000562118 ACKR2O00590 384 aa14.82□□□□□ -0.04
CDH1-204ENST00000562118 LINC00271P0C7V0 271 aa14.82□□□□□ -0.04
CDH1-204ENST00000562118 ATF7P17544 494 aaPredicted RBP14.82□□□□□ -0.04
CDH1-204ENST00000562118 KCNJ6P48051 423 aa14.82□□□□□ -0.04
CDH1-204ENST00000562118 FXR1P51114 621 aaKnown RBP eCLIP14.82□□□□□ -0.04
CDH1-204ENST00000562118 NDUFA8P51970 172 aa14.82□□□□□ -0.04
CDH1-204ENST00000562118 PEX3P56589 373 aa14.82□□□□□ -0.04
CDH1-204ENST00000562118 NFX1Q12986 1120 aaKnown RBP14.82□□□□□ -0.04
CDH1-204ENST00000562118 NPAS4Q8IUM7 802 aa14.82□□□□□ -0.04
CDH1-204ENST00000562118 PDILTQ8N807 584 aa14.82□□□□□ -0.04
CDH1-204ENST00000562118 SCLT1Q96NL6 688 aa14.82□□□□□ -0.04
CDH1-204ENST00000562118 ADAM2Q99965 735 aa14.82□□□□□ -0.04
CDH1-204ENST00000562118 PBX4Q9BYU1 374 aa14.82□□□□□ -0.04
CDH1-204ENST00000562118 PARVGQ9HBI0 331 aa14.82□□□□□ -0.04
CDH1-204ENST00000562118 OLFML3Q9NRN5 406 aa14.82□□□□□ -0.04
CDH1-204ENST00000562118 DACT1Q9NYF0 836 aa14.82□□□□□ -0.04
CDH1-204ENST00000562118 LARSQ9P2J5 1176 aaKnown RBP14.82□□□□□ -0.04
CDH1-204ENST00000562118 SEL1LQ9UBV2 794 aa14.82□□□□□ -0.04
CDH1-204ENST00000562118 ZMYM2Q9UBW7 1377 aa14.82□□□□□ -0.04
CDH1-204ENST00000562118 PDCD11Q14690 1871 aaKnown RBP14.81□□□□□ -0.04
CDH1-204ENST00000562118 A0A1B0GVL5 298 aa14.81□□□□□ -0.04
CDH1-204ENST00000562118 ZBBXA8MT70 800 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms