RNA–Protein interactions for RNA: ENST00000561896.1

MSLN-203, Transcript of mesothelin, humanhuman

TSL 5

Gene MSLN, Length 1,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-203ENST00000561896 FAM105AQ9NUU6 356 aa28.33■■■□□ 2.13
MSLN-203ENST00000561896 CLDND1Q9NY35 253 aa28.33■■■□□ 2.13
MSLN-203ENST00000561896 LTBRP36941 435 aa28.32■■■□□ 2.12
MSLN-203ENST00000561896 TFDP1Q14186 410 aa28.32■■■□□ 2.12
MSLN-203ENST00000561896 ZNF174Q15697 407 aa28.32■■■□□ 2.12
MSLN-203ENST00000561896 CATSPER3Q86XQ3 398 aa28.32■■■□□ 2.12
MSLN-203ENST00000561896 ERMNQ8TAM6 284 aa28.32■■■□□ 2.12
MSLN-203ENST00000561896 TLR9Q9NR96 1032 aa28.32■■■□□ 2.12
MSLN-203ENST00000561896 HCSTQ9UBK5 93 aa28.32■■■□□ 2.12
MSLN-203ENST00000561896 FAM50BQ9Y247 325 aa28.32■■■□□ 2.12
MSLN-203ENST00000561896 GRXCR2A6NFK2 248 aa28.31■■■□□ 2.12
MSLN-203ENST00000561896 MUTP22033 750 aa28.31■■■□□ 2.12
MSLN-203ENST00000561896 ARL2P36404 184 aa28.31■■■□□ 2.12
MSLN-203ENST00000561896 TECP42680 631 aa28.31■■■□□ 2.12
MSLN-203ENST00000561896 PTENP60484 403 aa28.31■■■□□ 2.12
MSLN-203ENST00000561896 PTCRAQ6ISU1 281 aaPredicted RBP28.31■■■□□ 2.12
MSLN-203ENST00000561896 KCNT2Q6UVM3 1135 aa28.31■■■□□ 2.12
MSLN-203ENST00000561896 HELQQ8TDG4 1101 aa28.31■■■□□ 2.12
MSLN-203ENST00000561896 ZNF558Q96NG5 402 aa28.31■■■□□ 2.12
MSLN-203ENST00000561896 NFKBIZQ9BYH8 718 aa28.31■■■□□ 2.12
MSLN-203ENST00000561896 MINDY3Q9H8M7 445 aa28.31■■■□□ 2.12
MSLN-203ENST00000561896 BMP2KQ9NSY1 1161 aaPredicted RBP28.31■■■□□ 2.12
MSLN-203ENST00000561896 DBR1Q9UK59 544 aaKnown RBP28.31■■■□□ 2.12
MSLN-203ENST00000561896 FSD2A1L4K1 749 aa28.3■■■□□ 2.12
MSLN-203ENST00000561896 RPA1P27694 616 aa28.3■■■□□ 2.12
MSLN-203ENST00000561896 IRS1P35568 1242 aa28.3■■■□□ 2.12
MSLN-203ENST00000561896 PIGOQ8TEQ8 1089 aa28.3■■■□□ 2.12
MSLN-203ENST00000561896 MRPS27Q92552 414 aaKnown RBP28.3■■■□□ 2.12
MSLN-203ENST00000561896 PGBD4Q96DM1 585 aa28.3■■■□□ 2.12
MSLN-203ENST00000561896 TMX3Q96JJ7 454 aa28.3■■■□□ 2.12
MSLN-203ENST00000561896 NACC1Q96RE7 527 aa28.3■■■□□ 2.12
MSLN-203ENST00000561896 PUF60Q9UHX1 559 aaKnown RBP28.3■■■□□ 2.12
MSLN-203ENST00000561896 H3BQ06 376 aaPredicted RBP28.29■■■□□ 2.12
MSLN-203ENST00000561896 AXLP30530 894 aa28.29■■■□□ 2.12
MSLN-203ENST00000561896 HOXA11P31270 313 aaPredicted RBP28.29■■■□□ 2.12
MSLN-203ENST00000561896 FXR2P51116 673 aaKnown RBP eCLIP28.29■■■□□ 2.12
MSLN-203ENST00000561896 ADAM15Q13444 863 aa28.29■■■□□ 2.12
MSLN-203ENST00000561896 MRPL10Q7Z7H8 261 aaKnown RBP28.29■■■□□ 2.12
MSLN-203ENST00000561896 EFHBQ8N7U6 833 aa28.29■■■□□ 2.12
MSLN-203ENST00000561896 C4orf32Q8N8J7 132 aa28.29■■■□□ 2.12
MSLN-203ENST00000561896 TBC1D32Q96NH3 1257 aa28.29■■■□□ 2.12
MSLN-203ENST00000561896 FSCN2O14926 492 aa28.28■■■□□ 2.12
MSLN-203ENST00000561896 MED24O75448 989 aa28.28■■■□□ 2.12
MSLN-203ENST00000561896 KRT17Q04695 432 aa28.28■■■□□ 2.12
MSLN-203ENST00000561896 HAUS3Q68CZ6 603 aa28.28■■■□□ 2.12
MSLN-203ENST00000561896 GLB1LQ6UWU2 654 aa28.28■■■□□ 2.12
MSLN-203ENST00000561896 EP400NLQ6ZTU2 488 aa28.28■■■□□ 2.12
MSLN-203ENST00000561896 CCDC51Q96ER9 411 aa28.28■■■□□ 2.12
MSLN-203ENST00000561896 CDCA3Q99618 268 aaPredicted RBP28.28■■■□□ 2.12
MSLN-203ENST00000561896 SPG21Q9NZD8 308 aa28.28■■■□□ 2.12
MSLN-203ENST00000561896 PCDHB2Q9Y5E7 798 aa28.28■■■□□ 2.12
MSLN-203ENST00000561896 STK24Q9Y6E0 443 aa28.28■■■□□ 2.12
MSLN-203ENST00000561896 LAD1O00515 517 aa28.27■■■□□ 2.12
MSLN-203ENST00000561896 ERLIN2O94905 339 aa28.27■■■□□ 2.12
MSLN-203ENST00000561896 PDIA5Q14554 519 aa28.27■■■□□ 2.12
MSLN-203ENST00000561896 ADGRD2Q7Z7M1 963 aa28.27■■■□□ 2.12
MSLN-203ENST00000561896 FAM178BQ8IXR5 827 aa28.27■■■□□ 2.12
MSLN-203ENST00000561896 CNNM3Q8NE01 707 aa28.27■■■□□ 2.12
MSLN-203ENST00000561896 MCPH1Q8NEM0 835 aa28.27■■■□□ 2.12
MSLN-203ENST00000561896 MICAL1Q8TDZ2 1067 aa28.27■■■□□ 2.12
MSLN-203ENST00000561896 CNTNAP2Q9UHC6 1331 aa28.26■■■□□ 2.11
MSLN-203ENST00000561896 ALDH7A1P49419 539 aaKnown RBP28.26■■■□□ 2.11
MSLN-203ENST00000561896 TOB1P50616 345 aaPredicted RBP28.26■■■□□ 2.11
MSLN-203ENST00000561896 NCBP1Q09161 790 aaKnown RBP28.26■■■□□ 2.11
MSLN-203ENST00000561896 SLC39A11Q8N1S5 342 aa28.26■■■□□ 2.11
MSLN-203ENST00000561896 ASAP3Q8TDY4 903 aa28.26■■■□□ 2.11
MSLN-203ENST00000561896 IGFLR1Q9H665 355 aa28.26■■■□□ 2.11
MSLN-203ENST00000561896 NGRNQ9NPE2 291 aaKnown RBP28.26■■■□□ 2.11
MSLN-203ENST00000561896 OFD1O75665 1012 aa28.25■■■□□ 2.11
MSLN-203ENST00000561896 CSPG5O95196 566 aa28.25■■■□□ 2.11
MSLN-203ENST00000561896 IL9P15248 144 aa28.25■■■□□ 2.11
MSLN-203ENST00000561896 GLRA2P23416 452 aa28.25■■■□□ 2.11
MSLN-203ENST00000561896 GTF2F1P35269 517 aaKnown RBP eCLIP28.25■■■□□ 2.11
MSLN-203ENST00000561896 ERVFC1P60507 584 aa28.25■■■□□ 2.11
MSLN-203ENST00000561896 CAPSQ13938 189 aa28.25■■■□□ 2.11
MSLN-203ENST00000561896 NOMO2Q5JPE7 1267 aa28.25■■■□□ 2.11
MSLN-203ENST00000561896 UBXN11Q5T124 520 aa28.25■■■□□ 2.11
MSLN-203ENST00000561896 LPPQ93052 612 aa28.25■■■□□ 2.11
MSLN-203ENST00000561896 RAB34Q9BZG1 259 aa28.25■■■□□ 2.11
MSLN-203ENST00000561896 TLE6Q9H808 572 aa28.25■■■□□ 2.11
MSLN-203ENST00000561896 PRKAG3Q9UGI9 489 aa28.25■■■□□ 2.11
MSLN-203ENST00000561896 TSPAN1O60635 241 aa28.24■■■□□ 2.11
MSLN-203ENST00000561896 TBX10O75333 385 aa28.24■■■□□ 2.11
MSLN-203ENST00000561896 CD2BP2O95400 341 aaKnown RBP28.24■■■□□ 2.11
MSLN-203ENST00000561896 NRIP1P48552 1158 aa28.24■■■□□ 2.11
MSLN-203ENST00000561896 MBTD1Q05BQ5 628 aa28.24■■■□□ 2.11
MSLN-203ENST00000561896 DLX2Q07687 328 aaPredicted RBP28.24■■■□□ 2.11
MSLN-203ENST00000561896 NOTUMQ6P988 496 aa28.24■■■□□ 2.11
MSLN-203ENST00000561896 POLR3FQ9H1D9 316 aaPredicted RBP28.24■■■□□ 2.11
MSLN-203ENST00000561896 UBN1Q9NPG3 1134 aa28.24■■■□□ 2.11
MSLN-203ENST00000561896 INO80B-WBP1J3KQ70 363 aa28.23■■■□□ 2.11
MSLN-203ENST00000561896 USO1O60763 962 aaKnown RBP28.23■■■□□ 2.11
MSLN-203ENST00000561896 NCLP19338 710 aaKnown RBP28.23■■■□□ 2.11
MSLN-203ENST00000561896 PRPHP41219 470 aa28.23■■■□□ 2.11
MSLN-203ENST00000561896 BCAR1P56945 870 aa28.23■■■□□ 2.11
MSLN-203ENST00000561896 PTGDRQ13258 359 aa28.23■■■□□ 2.11
MSLN-203ENST00000561896 RILPL1Q5EBL4 403 aa28.23■■■□□ 2.11
MSLN-203ENST00000561896 POTEGQ6S5H5 508 aa28.23■■■□□ 2.11
MSLN-203ENST00000561896 IGSF22Q8N9C0 903 aa28.23■■■□□ 2.11
MSLN-203ENST00000561896 MSLNLQ96KJ4 702 aa28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms