RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 LENG1Q96BZ8 264 aaPredicted RBP20.04■□□□□ 0.8
RAB40C-206ENST00000561781 GPR101Q96P66 508 aaPredicted RBP20.04■□□□□ 0.8
RAB40C-206ENST00000561781 FMO2Q99518 471 aa20.04■□□□□ 0.8
RAB40C-206ENST00000561781 SH3GLB1Q9Y371 365 aa20.04■□□□□ 0.8
RAB40C-206ENST00000561781 V9GY48 417 aaPredicted RBP20.04■□□□□ 0.8
RAB40C-206ENST00000561781 RBAK-RBAKDNI3L0D1 243 aa20.04■□□□□ 0.8
RAB40C-206ENST00000561781 KCNK3O14649 394 aa20.04■□□□□ 0.8
RAB40C-206ENST00000561781 CCDC6Q16204 474 aa20.04■□□□□ 0.8
RAB40C-206ENST00000561781 KBTBD12Q3ZCT8 623 aa20.04■□□□□ 0.8
RAB40C-206ENST00000561781 VWA3BQ502W6 1294 aa20.04■□□□□ 0.8
RAB40C-206ENST00000561781 MFSD4BQ5TF39 518 aa20.04■□□□□ 0.8
RAB40C-206ENST00000561781 HGSNATQ68CP4 663 aa20.04■□□□□ 0.8
RAB40C-206ENST00000561781 DENND2CQ68D51 928 aa20.04■□□□□ 0.8
RAB40C-206ENST00000561781 LRRC43Q8N309 656 aa20.04■□□□□ 0.8
RAB40C-206ENST00000561781 NEK9Q8TD19 979 aa20.04■□□□□ 0.8
RAB40C-206ENST00000561781 NAP1L3Q99457 506 aaPredicted RBP20.04■□□□□ 0.8
RAB40C-206ENST00000561781 AP1M1Q9BXS5 423 aa20.04■□□□□ 0.8
RAB40C-206ENST00000561781 AZI2Q9H6S1 392 aa20.04■□□□□ 0.8
RAB40C-206ENST00000561781 UTP11Q9Y3A2 253 aaKnown RBP20.04■□□□□ 0.8
RAB40C-206ENST00000561781 ASLP04424 464 aa20.03■□□□□ 0.8
RAB40C-206ENST00000561781 IDO1P14902 403 aa20.03■□□□□ 0.8
RAB40C-206ENST00000561781 LONP1P36776 959 aaKnown RBP20.03■□□□□ 0.8
RAB40C-206ENST00000561781 MKRN3Q13064 507 aaKnown RBP20.03■□□□□ 0.8
RAB40C-206ENST00000561781 TMTC2Q8N394 836 aa20.03■□□□□ 0.8
RAB40C-206ENST00000561781 RMDN2Q96LZ7 410 aa20.03■□□□□ 0.8
RAB40C-206ENST00000561781 OLFM3Q96PB7 478 aa20.03■□□□□ 0.8
RAB40C-206ENST00000561781 PLIN2Q99541 437 aa20.03■□□□□ 0.8
RAB40C-206ENST00000561781 PABPC3Q9H361 631 aaKnown RBP20.03■□□□□ 0.8
RAB40C-206ENST00000561781 DAAM1Q9Y4D1 1078 aa20.03■□□□□ 0.8
RAB40C-206ENST00000561781 AKAP11Q9UKA4 1901 aa20.03■□□□□ 0.8
RAB40C-206ENST00000561781 TLDC2A0PJX2 215 aa20.03■□□□□ 0.8
RAB40C-206ENST00000561781 YBX3P16989 372 aaKnown RBP eCLIP20.03■□□□□ 0.8
RAB40C-206ENST00000561781 PAX3P23760 479 aa20.03■□□□□ 0.8
RAB40C-206ENST00000561781 HOXA10P31260 410 aaPredicted RBP20.03■□□□□ 0.8
RAB40C-206ENST00000561781 RCAN1P53805 252 aa20.03■□□□□ 0.8
RAB40C-206ENST00000561781 RPS8P62241 208 aaKnown RBP20.03■□□□□ 0.8
RAB40C-206ENST00000561781 ACVR2BQ13705 512 aa20.03■□□□□ 0.8
RAB40C-206ENST00000561781 RPS6KA1Q15418 735 aa20.03■□□□□ 0.8
RAB40C-206ENST00000561781 PPP2R3CQ969Q6 453 aa20.03■□□□□ 0.8
RAB40C-206ENST00000561781 ZMYND12Q9H0C1 365 aa20.03■□□□□ 0.8
RAB40C-206ENST00000561781 DDX47Q9H0S4 455 aaKnown RBP20.03■□□□□ 0.8
RAB40C-206ENST00000561781 PIM2Q9P1W9 311 aa20.03■□□□□ 0.8
RAB40C-206ENST00000561781 PPEF1O14829 653 aaPredicted RBP20.02■□□□□ 0.8
RAB40C-206ENST00000561781 LIN52Q52LA3 116 aa20.02■□□□□ 0.8
RAB40C-206ENST00000561781 PDXDC1Q6P996 788 aa20.02■□□□□ 0.8
RAB40C-206ENST00000561781 ZNF554Q86TJ5 538 aa20.02■□□□□ 0.8
RAB40C-206ENST00000561781 TTLL6Q8N841 843 aa20.02■□□□□ 0.8
RAB40C-206ENST00000561781 SCG3Q8WXD2 468 aaKnown RBP20.02■□□□□ 0.8
RAB40C-206ENST00000561781 CORO1BQ9BR76 489 aa20.02■□□□□ 0.8
RAB40C-206ENST00000561781 IL1RAPL1Q9NZN1 696 aa20.02■□□□□ 0.8
RAB40C-206ENST00000561781 TCRBV5S4A2TA0A5A2 114 aa20.02■□□□□ 0.79
RAB40C-206ENST00000561781 PP2D1A8MPX8 630 aa20.02■□□□□ 0.79
RAB40C-206ENST00000561781 PGRMC1O00264 195 aaKnown RBP20.02■□□□□ 0.79
RAB40C-206ENST00000561781 HNRNPCP07910 306 aaKnown RBP eCLIP20.02■□□□□ 0.79
RAB40C-206ENST00000561781 RASSF2P50749 326 aa20.02■□□□□ 0.79
RAB40C-206ENST00000561781 IFI35P80217 286 aaPredicted RBP20.02■□□□□ 0.79
RAB40C-206ENST00000561781 FUT2Q10981 343 aa20.02■□□□□ 0.79
RAB40C-206ENST00000561781 BTG3Q14201 252 aaPredicted RBP20.02■□□□□ 0.79
RAB40C-206ENST00000561781 SNX30Q5VWJ9 437 aa20.02■□□□□ 0.79
RAB40C-206ENST00000561781 LDHAL6AQ6ZMR3 332 aa20.02■□□□□ 0.79
RAB40C-206ENST00000561781 NCCRP1Q6ZVX7 275 aaPredicted RBP20.02■□□□□ 0.79
RAB40C-206ENST00000561781 WDR60Q8WVS4 1066 aa20.02■□□□□ 0.79
RAB40C-206ENST00000561781 CLMNQ96JQ2 1002 aa20.02■□□□□ 0.79
RAB40C-206ENST00000561781 ITGB1BP2Q9UKP3 347 aa20.02■□□□□ 0.79
RAB40C-206ENST00000561781 CHMP2BQ9UQN3 213 aa20.02■□□□□ 0.79
RAB40C-206ENST00000561781 PLEKHA8P1O95397 391 aa20.01■□□□□ 0.79
RAB40C-206ENST00000561781 ITGA2BP08514 1039 aa20.01■□□□□ 0.79
RAB40C-206ENST00000561781 PSMD7P51665 324 aa20.01■□□□□ 0.79
RAB40C-206ENST00000561781 STK4Q13043 487 aa20.01■□□□□ 0.79
RAB40C-206ENST00000561781 INTS8Q75QN2 995 aaKnown RBP20.01■□□□□ 0.79
RAB40C-206ENST00000561781 PPFIBP2Q8ND30 876 aa20.01■□□□□ 0.79
RAB40C-206ENST00000561781 BRD8Q9H0E9 1235 aa20.01■□□□□ 0.79
RAB40C-206ENST00000561781 AIPL1Q9NZN9 384 aa20.01■□□□□ 0.79
RAB40C-206ENST00000561781 GFPT2O94808 682 aa20.01■□□□□ 0.79
RAB40C-206ENST00000561781 RNASELQ05823 741 aaKnown RBP20.01■□□□□ 0.79
RAB40C-206ENST00000561781 STYK1Q6J9G0 422 aa20.01■□□□□ 0.79
RAB40C-206ENST00000561781 KLC3Q6P597 504 aa20.01■□□□□ 0.79
RAB40C-206ENST00000561781 BTNL9Q6UXG8 535 aa20.01■□□□□ 0.79
RAB40C-206ENST00000561781 IRGQQ8WZA9 623 aa20.01■□□□□ 0.79
RAB40C-206ENST00000561781 CATSPER2Q96P56 530 aa20.01■□□□□ 0.79
RAB40C-206ENST00000561781 KBTBD4Q9NVX7 518 aa20.01■□□□□ 0.79
RAB40C-206ENST00000561781 SEC63Q9UGP8 760 aaKnown RBP20.01■□□□□ 0.79
RAB40C-206ENST00000561781 AMACRQ9UHK6 382 aa20.01■□□□□ 0.79
RAB40C-206ENST00000561781 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20■□□□□ 0.79
RAB40C-206ENST00000561781 PMS2P54278 862 aa20■□□□□ 0.79
RAB40C-206ENST00000561781 USH1GQ495M9 461 aa20■□□□□ 0.79
RAB40C-206ENST00000561781 ARL6IP4Q66PJ3 421 aaKnown RBP20■□□□□ 0.79
RAB40C-206ENST00000561781 CCDC84Q86UT8 332 aaPredicted RBP20■□□□□ 0.79
RAB40C-206ENST00000561781 VSIG1Q86XK7 387 aa20■□□□□ 0.79
RAB40C-206ENST00000561781 GRAMD1AQ96CP6 724 aa20■□□□□ 0.79
RAB40C-206ENST00000561781 TMEM109Q9BVC6 243 aa20■□□□□ 0.79
RAB40C-206ENST00000561781 CNNM1Q9NRU3 951 aa20■□□□□ 0.79
RAB40C-206ENST00000561781 CNOT7Q9UIV1 285 aaKnown RBP20■□□□□ 0.79
RAB40C-206ENST00000561781 TMEM98Q9Y2Y6 226 aa20■□□□□ 0.79
RAB40C-206ENST00000561781 TIAM2Q8IVF5 1701 aa20■□□□□ 0.79
RAB40C-206ENST00000561781 BRCA1P38398 1863 aaKnown RBP20■□□□□ 0.79
RAB40C-206ENST00000561781 FCER1AP12319 257 aa20■□□□□ 0.79
RAB40C-206ENST00000561781 PDE4DQ08499 809 aa20■□□□□ 0.79
RAB40C-206ENST00000561781 DALRD3Q5D0E6 543 aaKnown RBP20■□□□□ 0.79
RAB40C-206ENST00000561781 TTC8Q8TAM2 541 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms