RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 GTF3C3Q9Y5Q9 886 aa26.48■■□□□ 1.83
CDR2-202ENST00000561630 NLRC5Q86WI3 1866 aa26.48■■□□□ 1.83
CDR2-202ENST00000561630 GLRA2P23416 452 aa26.47■■□□□ 1.83
CDR2-202ENST00000561630 RAB27AP51159 221 aa26.47■■□□□ 1.83
CDR2-202ENST00000561630 CAPSQ13938 189 aa26.47■■□□□ 1.83
CDR2-202ENST00000561630 IL17AQ16552 155 aa26.47■■□□□ 1.83
CDR2-202ENST00000561630 ECM1Q16610 540 aa26.47■■□□□ 1.83
CDR2-202ENST00000561630 TCEAL5Q5H9L2 206 aa26.47■■□□□ 1.83
CDR2-202ENST00000561630 LRRC55Q6ZSA7 311 aa26.47■■□□□ 1.83
CDR2-202ENST00000561630 LRRC43Q8N309 656 aa26.47■■□□□ 1.83
CDR2-202ENST00000561630 MCPH1Q8NEM0 835 aa26.47■■□□□ 1.83
CDR2-202ENST00000561630 NFKBIZQ9BYH8 718 aa26.47■■□□□ 1.83
CDR2-202ENST00000561630 POLR3FQ9H1D9 316 aaPredicted RBP26.47■■□□□ 1.83
CDR2-202ENST00000561630 FAM105AQ9NUU6 356 aa26.47■■□□□ 1.83
CDR2-202ENST00000561630 LAG3P18627 525 aa26.46■■□□□ 1.83
CDR2-202ENST00000561630 CSPP1Q1MSJ5 1256 aa26.46■■□□□ 1.83
CDR2-202ENST00000561630 DTHD1Q6ZMT9 781 aa26.46■■□□□ 1.83
CDR2-202ENST00000561630 COLGALT1Q8NBJ5 622 aa26.46■■□□□ 1.83
CDR2-202ENST00000561630 HELQQ8TDG4 1101 aa26.46■■□□□ 1.83
CDR2-202ENST00000561630 RSPH1Q8WYR4 309 aa26.46■■□□□ 1.83
CDR2-202ENST00000561630 ARID2Q68CP9 1835 aa26.46■■□□□ 1.83
CDR2-202ENST00000561630 MUC3AQ02505 3323 aa26.45■■□□□ 1.82
CDR2-202ENST00000561630 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP26.45■■□□□ 1.82
CDR2-202ENST00000561630 ARHGEF35A5YM69 484 aa26.45■■□□□ 1.82
CDR2-202ENST00000561630 DNAJB1P25685 340 aa26.45■■□□□ 1.82
CDR2-202ENST00000561630 ATP2C1P98194 919 aaPredicted RBP26.45■■□□□ 1.82
CDR2-202ENST00000561630 PADI6Q6TGC4 694 aa26.45■■□□□ 1.82
CDR2-202ENST00000561630 SNX29Q8TEQ0 813 aa26.45■■□□□ 1.82
CDR2-202ENST00000561630 UBE2ZQ9H832 354 aaPredicted RBP26.45■■□□□ 1.82
CDR2-202ENST00000561630 GPRC5CQ9NQ84 441 aa26.45■■□□□ 1.82
CDR2-202ENST00000561630 ERLIN2O94905 339 aa26.44■■□□□ 1.82
CDR2-202ENST00000561630 BMP1P13497 986 aa26.44■■□□□ 1.82
CDR2-202ENST00000561630 CYP11B2P19099 503 aa26.44■■□□□ 1.82
CDR2-202ENST00000561630 MBTD1Q05BQ5 628 aa26.44■■□□□ 1.82
CDR2-202ENST00000561630 COL19A1Q14993 1142 aa26.44■■□□□ 1.82
CDR2-202ENST00000561630 MAEAQ7L5Y9 396 aa26.44■■□□□ 1.82
CDR2-202ENST00000561630 POF1BQ8WVV4 589 aa26.44■■□□□ 1.82
CDR2-202ENST00000561630 MRPL9Q9BYD2 267 aaKnown RBP26.44■■□□□ 1.82
CDR2-202ENST00000561630 KIAA1024Q9UPX6 916 aa26.44■■□□□ 1.82
CDR2-202ENST00000561630 PCDHB2Q9Y5E7 798 aa26.44■■□□□ 1.82
CDR2-202ENST00000561630 FNDC1Q4ZHG4 1894 aaPredicted RBP26.43■■□□□ 1.82
CDR2-202ENST00000561630 PP2D1A8MPX8 630 aa26.43■■□□□ 1.82
CDR2-202ENST00000561630 INO80B-WBP1J3KQ70 363 aa26.43■■□□□ 1.82
CDR2-202ENST00000561630 TSPAN1O60635 241 aa26.43■■□□□ 1.82
CDR2-202ENST00000561630 FGF18O76093 207 aa26.43■■□□□ 1.82
CDR2-202ENST00000561630 AXLP30530 894 aa26.43■■□□□ 1.82
CDR2-202ENST00000561630 KCNQ1P51787 676 aa26.43■■□□□ 1.82
CDR2-202ENST00000561630 UBE3AQ05086 875 aa26.43■■□□□ 1.82
CDR2-202ENST00000561630 UBXN11Q5T124 520 aa26.43■■□□□ 1.82
CDR2-202ENST00000561630 KRT79Q5XKE5 535 aa26.43■■□□□ 1.82
CDR2-202ENST00000561630 MRPL10Q7Z7H8 261 aaKnown RBP26.43■■□□□ 1.82
CDR2-202ENST00000561630 THNSL1Q8IYQ7 743 aa26.43■■□□□ 1.82
CDR2-202ENST00000561630 LPPQ93052 612 aa26.43■■□□□ 1.82
CDR2-202ENST00000561630 DDX19AQ9NUU7 478 aaKnown RBP26.43■■□□□ 1.82
CDR2-202ENST00000561630 BRWD1Q9NSI6 2320 aa26.42■■□□□ 1.82
CDR2-202ENST00000561630 PDCP20941 246 aa26.42■■□□□ 1.82
CDR2-202ENST00000561630 NCBP1Q09161 790 aaKnown RBP26.42■■□□□ 1.82
CDR2-202ENST00000561630 AMHR2Q16671 573 aa26.42■■□□□ 1.82
CDR2-202ENST00000561630 KCNT2Q6UVM3 1135 aa26.42■■□□□ 1.82
CDR2-202ENST00000561630 GLB1LQ6UWU2 654 aa26.42■■□□□ 1.82
CDR2-202ENST00000561630 BRAPQ7Z569 592 aa26.42■■□□□ 1.82
CDR2-202ENST00000561630 PGBD4Q96DM1 585 aa26.42■■□□□ 1.82
CDR2-202ENST00000561630 CCDC51Q96ER9 411 aa26.42■■□□□ 1.82
CDR2-202ENST00000561630 BHMT2Q9H2M3 363 aa26.42■■□□□ 1.82
CDR2-202ENST00000561630 BDP1A6H8Y1 2624 aa26.42■■□□□ 1.82
CDR2-202ENST00000561630 MEIS3P2A8K0S8 358 aa26.41■■□□□ 1.82
CDR2-202ENST00000561630 NCK2O43639 380 aa26.41■■□□□ 1.82
CDR2-202ENST00000561630 CSPG5O95196 566 aa26.41■■□□□ 1.82
CDR2-202ENST00000561630 CDC25AP30304 524 aa26.41■■□□□ 1.82
CDR2-202ENST00000561630 LONRF3Q496Y0 759 aa26.41■■□□□ 1.82
CDR2-202ENST00000561630 ARL6IP4Q66PJ3 421 aaKnown RBP26.41■■□□□ 1.82
CDR2-202ENST00000561630 NOTUMQ6P988 496 aa26.41■■□□□ 1.82
CDR2-202ENST00000561630 ADAMTS19Q8TE59 1207 aa26.41■■□□□ 1.82
CDR2-202ENST00000561630 PABPC5Q96DU9 382 aaKnown RBP26.41■■□□□ 1.82
CDR2-202ENST00000561630 INTS4Q96HW7 963 aaKnown RBP26.41■■□□□ 1.82
CDR2-202ENST00000561630 ZNF558Q96NG5 402 aa26.41■■□□□ 1.82
CDR2-202ENST00000561630 MMTAG2Q9BU76 263 aaKnown RBP26.41■■□□□ 1.82
CDR2-202ENST00000561630 LRRIQ4A6NIV6 560 aa26.4■■□□□ 1.82
CDR2-202ENST00000561630 OFD1O75665 1012 aa26.4■■□□□ 1.82
CDR2-202ENST00000561630 KCNA5P22460 613 aa26.4■■□□□ 1.82
CDR2-202ENST00000561630 IRS1P35568 1242 aa26.4■■□□□ 1.82
CDR2-202ENST00000561630 PPM1AP35813 382 aa26.4■■□□□ 1.82
CDR2-202ENST00000561630 PLCB3Q01970 1234 aa26.4■■□□□ 1.82
CDR2-202ENST00000561630 HYAL1Q12794 435 aa26.4■■□□□ 1.82
CDR2-202ENST00000561630 CDCA2Q69YH5 1023 aaPredicted RBP26.4■■□□□ 1.82
CDR2-202ENST00000561630 DNM3Q9UQ16 869 aa26.4■■□□□ 1.82
CDR2-202ENST00000561630 LZTS1Q9Y250 596 aa26.4■■□□□ 1.82
CDR2-202ENST00000561630 MYO7AQ13402 2215 aa26.4■■□□□ 1.82
CDR2-202ENST00000561630 KIAA1671Q9BY89 1806 aa26.39■■□□□ 1.82
CDR2-202ENST00000561630 NOMO2Q5JPE7 1267 aa26.39■■□□□ 1.82
CDR2-202ENST00000561630 AGMOQ6ZNB7 445 aa26.39■■□□□ 1.82
CDR2-202ENST00000561630 CNNM3Q8NE01 707 aa26.39■■□□□ 1.82
CDR2-202ENST00000561630 CPB2Q96IY4 423 aa26.39■■□□□ 1.82
CDR2-202ENST00000561630 VPS37CA5D8V6 355 aaPredicted RBP26.38■■□□□ 1.81
CDR2-202ENST00000561630 VWA3AA6NCI4 1184 aa26.38■■□□□ 1.81
CDR2-202ENST00000561630 K7ELQ4 463 aaPredicted RBP26.38■■□□□ 1.81
CDR2-202ENST00000561630 EYA4O95677 639 aa26.38■■□□□ 1.81
CDR2-202ENST00000561630 ARF4P18085 180 aaPredicted RBP26.38■■□□□ 1.81
CDR2-202ENST00000561630 NCLP19338 710 aaKnown RBP26.38■■□□□ 1.81
CDR2-202ENST00000561630 PBX3P40426 434 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms