RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 KIAA0319LQ8IZA0 1049 aa12.84□□□□□ -0.35
HERC1-214ENST00000561400 RETREG2Q8NC44 543 aa12.84□□□□□ -0.35
HERC1-214ENST00000561400 DEF6Q9H4E7 631 aa12.84□□□□□ -0.35
HERC1-214ENST00000561400 TMEM63CQ9P1W3 806 aa12.84□□□□□ -0.35
HERC1-214ENST00000561400 SMIM35A0A1B0GVV1 85 aa12.84□□□□□ -0.35
HERC1-214ENST00000561400 CCDC85CA6NKD9 419 aa12.84□□□□□ -0.35
HERC1-214ENST00000561400 CD151P48509 253 aa12.84□□□□□ -0.35
HERC1-214ENST00000561400 LRRC26Q2I0M4 334 aa12.84□□□□□ -0.35
HERC1-214ENST00000561400 C1orf53Q5VUE5 145 aa12.84□□□□□ -0.35
HERC1-214ENST00000561400 DNAJB3Q8WWF6 145 aa12.84□□□□□ -0.35
HERC1-214ENST00000561400 JPH2Q9BR39 696 aaPredicted RBP12.84□□□□□ -0.35
HERC1-214ENST00000561400 SEZ6LQ9BYH1 1024 aa12.84□□□□□ -0.35
HERC1-214ENST00000561400 LRRC27Q9C0I9 530 aa12.84□□□□□ -0.35
HERC1-214ENST00000561400 FAM49AQ9H0Q0 323 aaPredicted RBP12.84□□□□□ -0.35
HERC1-214ENST00000561400 NUP62CLQ9H1M0 184 aa12.84□□□□□ -0.35
HERC1-214ENST00000561400 GAS2O43903 313 aaKnown RBP12.83□□□□□ -0.36
HERC1-214ENST00000561400 KLRC4O43908 158 aa12.83□□□□□ -0.36
HERC1-214ENST00000561400 PQBP1O60828 265 aaKnown RBP12.83□□□□□ -0.36
HERC1-214ENST00000561400 CD4P01730 458 aa12.83□□□□□ -0.36
HERC1-214ENST00000561400 VTNP04004 478 aa12.83□□□□□ -0.36
HERC1-214ENST00000561400 NEFHP12036 1026 aa12.83□□□□□ -0.36
HERC1-214ENST00000561400 IDEP14735 1019 aa12.83□□□□□ -0.36
HERC1-214ENST00000561400 ARL2P36404 184 aa12.83□□□□□ -0.36
HERC1-214ENST00000561400 ASIC1P78348 528 aa12.83□□□□□ -0.36
HERC1-214ENST00000561400 TRIM60Q495X7 471 aa12.83□□□□□ -0.36
HERC1-214ENST00000561400 IER5Q5VY09 327 aa12.83□□□□□ -0.36
HERC1-214ENST00000561400 CAVIN1Q6NZI2 390 aaKnown RBP12.83□□□□□ -0.36
HERC1-214ENST00000561400 ANKRD33Q7Z3H0 272 aa12.83□□□□□ -0.36
HERC1-214ENST00000561400 KSR1Q8IVT5 923 aa12.83□□□□□ -0.36
HERC1-214ENST00000561400 PRPF31Q8WWY3 499 aaKnown RBP12.83□□□□□ -0.36
HERC1-214ENST00000561400 BSNDQ8WZ55 320 aa12.83□□□□□ -0.36
HERC1-214ENST00000561400 DHX38Q92620 1227 aaKnown RBP12.83□□□□□ -0.36
HERC1-214ENST00000561400 CCDC34Q96HJ3 373 aa12.83□□□□□ -0.36
HERC1-214ENST00000561400 POLR3FQ9H1D9 316 aaPredicted RBP12.83□□□□□ -0.36
HERC1-214ENST00000561400 SUCLA2Q9P2R7 463 aaPredicted RBP12.83□□□□□ -0.36
HERC1-214ENST00000561400 ODF2LQ9ULJ1 636 aa12.83□□□□□ -0.36
HERC1-214ENST00000561400 PCDHA5Q9Y5H7 936 aa12.83□□□□□ -0.36
HERC1-214ENST00000561400 SIP14410 1827 aa12.83□□□□□ -0.36
HERC1-214ENST00000561400 RBAK-RBAKDNI3L0D1 243 aa12.82□□□□□ -0.36
HERC1-214ENST00000561400 MYL1P05976 194 aa12.82□□□□□ -0.36
HERC1-214ENST00000561400 ZNF131P52739 623 aa12.82□□□□□ -0.36
HERC1-214ENST00000561400 TLE2Q04725 743 aa12.82□□□□□ -0.36
HERC1-214ENST00000561400 SPATA20Q8TB22 786 aa12.82□□□□□ -0.36
HERC1-214ENST00000561400 ASAP3Q8TDY4 903 aa12.82□□□□□ -0.36
HERC1-214ENST00000561400 TIPINQ9BVW5 301 aa12.82□□□□□ -0.36
HERC1-214ENST00000561400 NOD1Q9Y239 953 aa12.82□□□□□ -0.36
HERC1-214ENST00000561400 FRMD3A2A2Y4 597 aa12.82□□□□□ -0.36
HERC1-214ENST00000561400 GLRA2P23416 452 aa12.82□□□□□ -0.36
HERC1-214ENST00000561400 TMOD1P28289 359 aa12.82□□□□□ -0.36
HERC1-214ENST00000561400 DNM2P50570 870 aa12.82□□□□□ -0.36
HERC1-214ENST00000561400 TMEM62Q0P6H9 643 aa12.82□□□□□ -0.36
HERC1-214ENST00000561400 SKOR2Q2VWA4 1001 aaPredicted RBP12.82□□□□□ -0.36
HERC1-214ENST00000561400 TAF2Q6P1X5 1199 aa12.82□□□□□ -0.36
HERC1-214ENST00000561400 NME8Q8N427 588 aa12.82□□□□□ -0.36
HERC1-214ENST00000561400 GOLGA6L1Q8N7Z2 621 aa12.82□□□□□ -0.36
HERC1-214ENST00000561400 KLHL23Q8NBE8 558 aa12.82□□□□□ -0.36
HERC1-214ENST00000561400 TCP11Q8WWU5 503 aa12.82□□□□□ -0.36
HERC1-214ENST00000561400 PSPC1Q8WXF1 523 aaKnown RBP12.82□□□□□ -0.36
HERC1-214ENST00000561400 KIFAP3Q92845 792 aa12.82□□□□□ -0.36
HERC1-214ENST00000561400 ZNF668Q96K58 619 aaPredicted RBP12.82□□□□□ -0.36
HERC1-214ENST00000561400 ZHX3Q9H4I2 956 aa12.82□□□□□ -0.36
HERC1-214ENST00000561400 PANK4Q9NVE7 773 aa12.82□□□□□ -0.36
HERC1-214ENST00000561400 HOOK1Q9UJC3 728 aaKnown RBP12.82□□□□□ -0.36
HERC1-214ENST00000561400 AKT3Q9Y243 479 aa12.82□□□□□ -0.36
HERC1-214ENST00000561400 MROH7Q68CQ1 1323 aa12.81□□□□□ -0.36
HERC1-214ENST00000561400 FAM13AO94988 1023 aa12.81□□□□□ -0.36
HERC1-214ENST00000561400 RPN1P04843 607 aaKnown RBP12.81□□□□□ -0.36
HERC1-214ENST00000561400 SARSP49591 514 aaKnown RBP12.81□□□□□ -0.36
HERC1-214ENST00000561400 RTP1P59025 263 aa12.81□□□□□ -0.36
HERC1-214ENST00000561400 FAAP100Q0VG06 881 aa12.81□□□□□ -0.36
HERC1-214ENST00000561400 LAMTOR4Q0VGL1 99 aa12.81□□□□□ -0.36
HERC1-214ENST00000561400 PTK7Q13308 1070 aa12.81□□□□□ -0.36
HERC1-214ENST00000561400 TRIM71Q2Q1W2 868 aaKnown RBP12.81□□□□□ -0.36
HERC1-214ENST00000561400 UNC13DQ70J99 1090 aa12.81□□□□□ -0.36
HERC1-214ENST00000561400 RHPN2Q8IUC4 686 aa12.81□□□□□ -0.36
HERC1-214ENST00000561400 HPS3Q969F9 1004 aa12.81□□□□□ -0.36
HERC1-214ENST00000561400 TOX2Q96NM4 488 aa12.81□□□□□ -0.36
HERC1-214ENST00000561400 PPP1R16BQ96T49 567 aa12.81□□□□□ -0.36
HERC1-214ENST00000561400 PARVGQ9HBI0 331 aa12.81□□□□□ -0.36
HERC1-214ENST00000561400 KIAA1468Q9P260 1216 aa12.81□□□□□ -0.36
HERC1-214ENST00000561400 ATP11BQ9Y2G3 1177 aa12.81□□□□□ -0.36
HERC1-214ENST00000561400 PVALEFA0A1B0GWK0 134 aa12.81□□□□□ -0.36
HERC1-214ENST00000561400 CAND2O75155 1236 aa12.81□□□□□ -0.36
HERC1-214ENST00000561400 TBCAO75347 108 aaKnown RBP12.81□□□□□ -0.36
HERC1-214ENST00000561400 PEX3P56589 373 aa12.81□□□□□ -0.36
HERC1-214ENST00000561400 EHHADHQ08426 723 aa12.81□□□□□ -0.36
HERC1-214ENST00000561400 COASYQ13057 564 aa12.81□□□□□ -0.36
HERC1-214ENST00000561400 CAPSQ13938 189 aa12.81□□□□□ -0.36
HERC1-214ENST00000561400 KMT5BQ4FZB7 885 aa12.81□□□□□ -0.36
HERC1-214ENST00000561400 CCDC183Q5T5S1 534 aa12.81□□□□□ -0.36
HERC1-214ENST00000561400 SFR1Q86XK3 245 aa12.81□□□□□ -0.36
HERC1-214ENST00000561400 CCDC65Q8IXS2 484 aa12.81□□□□□ -0.36
HERC1-214ENST00000561400 MYCT1Q8N699 235 aa12.81□□□□□ -0.36
HERC1-214ENST00000561400 FIZ1Q96SL8 496 aa12.81□□□□□ -0.36
HERC1-214ENST00000561400 COL4A3BPQ9Y5P4 624 aa12.81□□□□□ -0.36
HERC1-214ENST00000561400 PLS3P13797 630 aa12.8□□□□□ -0.36
HERC1-214ENST00000561400 NPTX2P47972 431 aa12.8□□□□□ -0.36
HERC1-214ENST00000561400 NLRP11P59045 1033 aaKnown RBP12.8□□□□□ -0.36
HERC1-214ENST00000561400 MXD4Q14582 209 aaPredicted RBP12.8□□□□□ -0.36
HERC1-214ENST00000561400 HERC4Q5GLZ8 1057 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms