RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 RARS2Q5T160 578 aaKnown RBP13.29□□□□□ -0.28
CARMIL3-204ENST00000561354 PPFIBP1Q86W92 1011 aa13.29□□□□□ -0.28
CARMIL3-204ENST00000561354 TMEM173Q86WV6 379 aaPredicted RBP13.29□□□□□ -0.28
CARMIL3-204ENST00000561354 FAM177A1Q8N128 213 aaPredicted RBP13.29□□□□□ -0.28
CARMIL3-204ENST00000561354 PLCD3Q8N3E9 789 aa13.29□□□□□ -0.28
CARMIL3-204ENST00000561354 TMEM87AQ8NBN3 555 aa13.29□□□□□ -0.28
CARMIL3-204ENST00000561354 ATOH1Q92858 354 aaPredicted RBP13.29□□□□□ -0.28
CARMIL3-204ENST00000561354 JPH2Q9BR39 696 aaPredicted RBP13.29□□□□□ -0.28
CARMIL3-204ENST00000561354 NRDE2Q9H7Z3 1164 aa13.29□□□□□ -0.28
CARMIL3-204ENST00000561354 FAM86C1Q9NVL1 165 aa13.29□□□□□ -0.28
CARMIL3-204ENST00000561354 SUCLA2Q9P2R7 463 aaPredicted RBP13.29□□□□□ -0.28
CARMIL3-204ENST00000561354 MYO10Q9HD67 2058 aa13.28□□□□□ -0.28
CARMIL3-204ENST00000561354 TMEM150BA6NC51 233 aa13.28□□□□□ -0.28
CARMIL3-204ENST00000561354 PROB1E7EW31 1015 aa13.28□□□□□ -0.28
CARMIL3-204ENST00000561354 M0R2N6 131 aa13.28□□□□□ -0.28
CARMIL3-204ENST00000561354 OFD1O75665 1012 aa13.28□□□□□ -0.28
CARMIL3-204ENST00000561354 TDP2O95551 362 aa13.28□□□□□ -0.28
CARMIL3-204ENST00000561354 WEE2P0C1S8 567 aa13.28□□□□□ -0.28
CARMIL3-204ENST00000561354 EPCAMP16422 314 aa13.28□□□□□ -0.28
CARMIL3-204ENST00000561354 PSMC5P62195 406 aa13.28□□□□□ -0.28
CARMIL3-204ENST00000561354 CCT2P78371 535 aaKnown RBP13.28□□□□□ -0.28
CARMIL3-204ENST00000561354 ANO5Q75V66 913 aa13.28□□□□□ -0.28
CARMIL3-204ENST00000561354 RHPN2Q8IUC4 686 aa13.28□□□□□ -0.28
CARMIL3-204ENST00000561354 TRIM22Q8IYM9 498 aa13.28□□□□□ -0.28
CARMIL3-204ENST00000561354 C12orf76Q8N812 135 aaPredicted RBP13.28□□□□□ -0.28
CARMIL3-204ENST00000561354 TDRD5Q8NAT2 981 aaKnown RBP13.28□□□□□ -0.28
CARMIL3-204ENST00000561354 ETNPPLQ8TBG4 499 aa13.28□□□□□ -0.28
CARMIL3-204ENST00000561354 AUTS2Q8WXX7 1259 aa13.28□□□□□ -0.28
CARMIL3-204ENST00000561354 LPPQ93052 612 aa13.28□□□□□ -0.28
CARMIL3-204ENST00000561354 PGBD4Q96DM1 585 aa13.28□□□□□ -0.28
CARMIL3-204ENST00000561354 SH2D3AQ9BRG2 576 aa13.28□□□□□ -0.28
CARMIL3-204ENST00000561354 NCOA5Q9HCD5 579 aaKnown RBP13.28□□□□□ -0.28
CARMIL3-204ENST00000561354 STK39Q9UEW8 545 aa13.28□□□□□ -0.28
CARMIL3-204ENST00000561354 DBR1Q9UK59 544 aaKnown RBP13.28□□□□□ -0.28
CARMIL3-204ENST00000561354 PIN4Q9Y237 131 aaKnown RBP13.28□□□□□ -0.28
CARMIL3-204ENST00000561354 CACNA1HO95180 2353 aa13.27□□□□□ -0.29
CARMIL3-204ENST00000561354 MEIS3P2A8K0S8 358 aa13.27□□□□□ -0.29
CARMIL3-204ENST00000561354 DDX11L8A8MPP1 907 aa13.27□□□□□ -0.29
CARMIL3-204ENST00000561354 H0Y858 1186 aa13.27□□□□□ -0.29
CARMIL3-204ENST00000561354 DEXIO95424 95 aa13.27□□□□□ -0.29
CARMIL3-204ENST00000561354 RNASELQ05823 741 aaKnown RBP13.27□□□□□ -0.29
CARMIL3-204ENST00000561354 GALNT17Q6IS24 598 aa13.27□□□□□ -0.29
CARMIL3-204ENST00000561354 CATSPER4Q7RTX7 472 aa13.27□□□□□ -0.29
CARMIL3-204ENST00000561354 BLIDQ8IZY5 108 aa13.27□□□□□ -0.29
CARMIL3-204ENST00000561354 TMEM105Q8N8V8 129 aa13.27□□□□□ -0.29
CARMIL3-204ENST00000561354 DAGLBQ8NCG7 672 aa13.27□□□□□ -0.29
CARMIL3-204ENST00000561354 BCL7CQ8WUZ0 217 aaPredicted RBP13.27□□□□□ -0.29
CARMIL3-204ENST00000561354 IFT122Q9HBG6 1241 aa13.27□□□□□ -0.29
CARMIL3-204ENST00000561354 AGPAT5Q9NUQ2 364 aa13.27□□□□□ -0.29
CARMIL3-204ENST00000561354 LIMD1Q9UGP4 676 aa13.27□□□□□ -0.29
CARMIL3-204ENST00000561354 DKC1O60832 514 aaKnown RBP eCLIP13.26□□□□□ -0.29
CARMIL3-204ENST00000561354 ASGR2P07307 311 aa13.26□□□□□ -0.29
CARMIL3-204ENST00000561354 SLC11A1P49279 550 aa13.26□□□□□ -0.29
CARMIL3-204ENST00000561354 CLCN5P51795 746 aa13.26□□□□□ -0.29
CARMIL3-204ENST00000561354 SSRP1Q08945 709 aaKnown RBP13.26□□□□□ -0.29
CARMIL3-204ENST00000561354 PTPN14Q15678 1187 aa13.26□□□□□ -0.29
CARMIL3-204ENST00000561354 LONRF3Q496Y0 759 aa13.26□□□□□ -0.29
CARMIL3-204ENST00000561354 KANK3Q6NY19 840 aa13.26□□□□□ -0.29
CARMIL3-204ENST00000561354 AGMOQ6ZNB7 445 aa13.26□□□□□ -0.29
CARMIL3-204ENST00000561354 MRPL10Q7Z7H8 261 aaKnown RBP13.26□□□□□ -0.29
CARMIL3-204ENST00000561354 GPR149Q86SP6 731 aa13.26□□□□□ -0.29
CARMIL3-204ENST00000561354 CABP7Q86V35 215 aa13.26□□□□□ -0.29
CARMIL3-204ENST00000561354 KSR1Q8IVT5 923 aa13.26□□□□□ -0.29
CARMIL3-204ENST00000561354 EXOC8Q8IYI6 725 aa13.26□□□□□ -0.29
CARMIL3-204ENST00000561354 NLRP4Q96MN2 994 aa13.26□□□□□ -0.29
CARMIL3-204ENST00000561354 TMEM175Q9BSA9 504 aa13.26□□□□□ -0.29
CARMIL3-204ENST00000561354 VN1R3Q9BXE9 311 aa13.26□□□□□ -0.29
CARMIL3-204ENST00000561354 SMOC2Q9H3U7 446 aa13.26□□□□□ -0.29
CARMIL3-204ENST00000561354 SFXN1Q9H9B4 322 aa13.26□□□□□ -0.29
CARMIL3-204ENST00000561354 CYP26B1Q9NR63 512 aa13.26□□□□□ -0.29
CARMIL3-204ENST00000561354 KANSL3Q9P2N6 904 aa13.26□□□□□ -0.29
CARMIL3-204ENST00000561354 DNAJB4Q9UDY4 337 aa13.26□□□□□ -0.29
CARMIL3-204ENST00000561354 INPP5FQ9Y2H2 1132 aa13.26□□□□□ -0.29
CARMIL3-204ENST00000561354 PPME1Q9Y570 386 aa13.26□□□□□ -0.29
CARMIL3-204ENST00000561354 PCDHB2Q9Y5E7 798 aa13.26□□□□□ -0.29
CARMIL3-204ENST00000561354 CNTNAP2Q9UHC6 1331 aa13.25□□□□□ -0.29
CARMIL3-204ENST00000561354 LILRB3O75022 631 aa13.25□□□□□ -0.29
CARMIL3-204ENST00000561354 REC8O95072 547 aa13.25□□□□□ -0.29
CARMIL3-204ENST00000561354 ALDH2P05091 517 aa13.25□□□□□ -0.29
CARMIL3-204ENST00000561354 QARSP47897 775 aaKnown RBP13.25□□□□□ -0.29
CARMIL3-204ENST00000561354 PPP2R5CQ13362 524 aa13.25□□□□□ -0.29
CARMIL3-204ENST00000561354 TOB2Q14106 344 aaPredicted RBP13.25□□□□□ -0.29
CARMIL3-204ENST00000561354 NONOQ15233 471 aaKnown RBP eCLIP13.25□□□□□ -0.29
CARMIL3-204ENST00000561354 NPY5RQ15761 445 aa13.25□□□□□ -0.29
CARMIL3-204ENST00000561354 ASTLQ6HA08 431 aaPredicted RBP13.25□□□□□ -0.29
CARMIL3-204ENST00000561354 TMC5Q6UXY8 1006 aa13.25□□□□□ -0.29
CARMIL3-204ENST00000561354 RUFY3Q7L099 469 aa13.25□□□□□ -0.29
CARMIL3-204ENST00000561354 OTOP3Q7RTS5 596 aa13.25□□□□□ -0.29
CARMIL3-204ENST00000561354 SRGAP1Q7Z6B7 1085 aa13.25□□□□□ -0.29
CARMIL3-204ENST00000561354 ZNF280BQ86YH2 543 aa13.25□□□□□ -0.29
CARMIL3-204ENST00000561354 URGCPQ8TCY9 931 aa13.25□□□□□ -0.29
CARMIL3-204ENST00000561354 SLC7A3Q8WY07 619 aa13.25□□□□□ -0.29
CARMIL3-204ENST00000561354 ACSF2Q96CM8 615 aaPredicted RBP13.25□□□□□ -0.29
CARMIL3-204ENST00000561354 ZNF274Q96GC6 653 aaPredicted RBP13.25□□□□□ -0.29
CARMIL3-204ENST00000561354 SNX27Q96L92 541 aa13.25□□□□□ -0.29
CARMIL3-204ENST00000561354 FAM20AQ96MK3 541 aa13.25□□□□□ -0.29
CARMIL3-204ENST00000561354 KLHL5Q96PQ7 755 aa13.25□□□□□ -0.29
CARMIL3-204ENST00000561354 EMILIN2Q9BXX0 1053 aa13.25□□□□□ -0.29
CARMIL3-204ENST00000561354 ZSWIM6Q9HCJ5 1215 aa13.25□□□□□ -0.29
CARMIL3-204ENST00000561354 DDX25Q9UHL0 483 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms