RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 KARSQ15046 597 aaKnown RBP22.06■■□□□ 1.12
TSPAN3-210ENST00000561277 STK38Q15208 465 aa22.06■■□□□ 1.12
TSPAN3-210ENST00000561277 GDPD5Q8WTR4 605 aa22.06■■□□□ 1.12
TSPAN3-210ENST00000561277 TRANK1O15050 2925 aa22.06■■□□□ 1.12
TSPAN3-210ENST00000561277 A0A0U1RQF3 1178 aa22.05■■□□□ 1.12
TSPAN3-210ENST00000561277 PLCG1P19174 1290 aa22.05■■□□□ 1.12
TSPAN3-210ENST00000561277 NASPP49321 788 aaPredicted RBP22.05■■□□□ 1.12
TSPAN3-210ENST00000561277 RINT1Q6NUQ1 792 aa22.05■■□□□ 1.12
TSPAN3-210ENST00000561277 USP49Q70CQ1 688 aa22.05■■□□□ 1.12
TSPAN3-210ENST00000561277 CMTR2Q8IYT2 770 aaKnown RBP22.05■■□□□ 1.12
TSPAN3-210ENST00000561277 EPSTI1Q96J88 318 aa22.05■■□□□ 1.12
TSPAN3-210ENST00000561277 ELAC1Q9H777 363 aaKnown RBP22.05■■□□□ 1.12
TSPAN3-210ENST00000561277 TBKBP1A7MCY6 615 aa22.04■■□□□ 1.12
TSPAN3-210ENST00000561277 TSPAN1O60635 241 aa22.04■■□□□ 1.12
TSPAN3-210ENST00000561277 PLA2G4BP0C869 781 aa22.04■■□□□ 1.12
TSPAN3-210ENST00000561277 NAMPTP43490 491 aa22.04■■□□□ 1.12
TSPAN3-210ENST00000561277 RAD51AP2Q09MP3 1159 aa22.04■■□□□ 1.12
TSPAN3-210ENST00000561277 LONRF3Q496Y0 759 aa22.04■■□□□ 1.12
TSPAN3-210ENST00000561277 EPC2Q52LR7 807 aa22.04■■□□□ 1.12
TSPAN3-210ENST00000561277 IFNLR1Q8IU57 520 aaPredicted RBP22.04■■□□□ 1.12
TSPAN3-210ENST00000561277 ZBTB8OSQ8IWT0 167 aa22.04■■□□□ 1.12
TSPAN3-210ENST00000561277 LINC00301Q8NCQ3 95 aa22.04■■□□□ 1.12
TSPAN3-210ENST00000561277 FBXO22Q8NEZ5 403 aa22.04■■□□□ 1.12
TSPAN3-210ENST00000561277 DEPTORQ8TB45 409 aa22.04■■□□□ 1.12
TSPAN3-210ENST00000561277 KIFAP3Q92845 792 aa22.04■■□□□ 1.12
TSPAN3-210ENST00000561277 KIFC3Q9BVG8 833 aa22.04■■□□□ 1.12
TSPAN3-210ENST00000561277 NFKBIZQ9BYH8 718 aa22.04■■□□□ 1.12
TSPAN3-210ENST00000561277 MRPL42Q9Y6G3 142 aaKnown RBP22.04■■□□□ 1.12
TSPAN3-210ENST00000561277 PRUNE2Q8WUY3 3088 aa22.04■■□□□ 1.12
TSPAN3-210ENST00000561277 NLRC5Q86WI3 1866 aa22.04■■□□□ 1.12
TSPAN3-210ENST00000561277 SLC26A4O43511 780 aa22.04■■□□□ 1.12
TSPAN3-210ENST00000561277 HIP1RO75146 1068 aa22.04■■□□□ 1.12
TSPAN3-210ENST00000561277 HOXA11P31270 313 aaPredicted RBP22.04■■□□□ 1.12
TSPAN3-210ENST00000561277 CTNNB1P35222 781 aa22.04■■□□□ 1.12
TSPAN3-210ENST00000561277 TMEM192Q8IY95 271 aa22.04■■□□□ 1.12
TSPAN3-210ENST00000561277 KCTD17Q8N5Z5 321 aa22.04■■□□□ 1.12
TSPAN3-210ENST00000561277 SYT2Q8N9I0 419 aaPredicted RBP22.04■■□□□ 1.12
TSPAN3-210ENST00000561277 KRI1Q8N9T8 703 aaKnown RBP22.04■■□□□ 1.12
TSPAN3-210ENST00000561277 MAFAQ8NHW3 353 aaPredicted RBP22.04■■□□□ 1.12
TSPAN3-210ENST00000561277 LRRC15Q8TF66 581 aa22.04■■□□□ 1.12
TSPAN3-210ENST00000561277 SYMPKQ92797 1274 aaKnown RBP22.04■■□□□ 1.12
TSPAN3-210ENST00000561277 CPB2Q96IY4 423 aa22.04■■□□□ 1.12
TSPAN3-210ENST00000561277 IFT74Q96LB3 600 aa22.04■■□□□ 1.12
TSPAN3-210ENST00000561277 FAM105AQ9NUU6 356 aa22.04■■□□□ 1.12
TSPAN3-210ENST00000561277 ATF7P17544 494 aaPredicted RBP22.03■■□□□ 1.12
TSPAN3-210ENST00000561277 LIG1P18858 919 aa22.03■■□□□ 1.12
TSPAN3-210ENST00000561277 SLC12A3P55017 1021 aa22.03■■□□□ 1.12
TSPAN3-210ENST00000561277 DHX8Q14562 1220 aaKnown RBP22.03■■□□□ 1.12
TSPAN3-210ENST00000561277 PPP2R5AQ15172 486 aa22.03■■□□□ 1.12
TSPAN3-210ENST00000561277 AMHR2Q16671 573 aa22.03■■□□□ 1.12
TSPAN3-210ENST00000561277 CDCA2Q69YH5 1023 aaPredicted RBP22.03■■□□□ 1.12
TSPAN3-210ENST00000561277 C1orf186Q6ZWK4 172 aa22.03■■□□□ 1.12
TSPAN3-210ENST00000561277 ABI1Q8IZP0 508 aa22.03■■□□□ 1.12
TSPAN3-210ENST00000561277 SAMD11Q96NU1 681 aa22.03■■□□□ 1.12
TSPAN3-210ENST00000561277 SPTLC2O15270 562 aa22.02■■□□□ 1.12
TSPAN3-210ENST00000561277 B4GALT5O43286 388 aa22.02■■□□□ 1.12
TSPAN3-210ENST00000561277 LINC00271P0C7V0 271 aa22.02■■□□□ 1.12
TSPAN3-210ENST00000561277 TXLNAP40222 546 aa22.02■■□□□ 1.12
TSPAN3-210ENST00000561277 NCBP1Q09161 790 aaKnown RBP22.02■■□□□ 1.12
TSPAN3-210ENST00000561277 PCBP1Q15365 356 aaKnown RBP eCLIP22.02■■□□□ 1.12
TSPAN3-210ENST00000561277 DAW1Q8N136 415 aa22.02■■□□□ 1.12
TSPAN3-210ENST00000561277 MICALL1Q8N3F8 863 aa22.02■■□□□ 1.12
TSPAN3-210ENST00000561277 LPPQ93052 612 aa22.02■■□□□ 1.12
TSPAN3-210ENST00000561277 DRC1Q96MC2 740 aa22.02■■□□□ 1.12
TSPAN3-210ENST00000561277 TRAIPQ9BWF2 469 aa22.02■■□□□ 1.12
TSPAN3-210ENST00000561277 CCSER1Q9C0I3 900 aa22.02■■□□□ 1.12
TSPAN3-210ENST00000561277 C2orf40Q9H1Z8 148 aa22.02■■□□□ 1.12
TSPAN3-210ENST00000561277 RNF19AQ9NV58 838 aa22.02■■□□□ 1.12
TSPAN3-210ENST00000561277 RALGAPA2Q2PPJ7 1873 aa22.01■■□□□ 1.11
TSPAN3-210ENST00000561277 FNDC1Q4ZHG4 1894 aaPredicted RBP22.01■■□□□ 1.11
TSPAN3-210ENST00000561277 HOXA2O43364 376 aa22.01■■□□□ 1.11
TSPAN3-210ENST00000561277 ARF4P18085 180 aaPredicted RBP22.01■■□□□ 1.11
TSPAN3-210ENST00000561277 PEX3P56589 373 aa22.01■■□□□ 1.11
TSPAN3-210ENST00000561277 CACNB1Q02641 598 aaPredicted RBP22.01■■□□□ 1.11
TSPAN3-210ENST00000561277 SPOUT1Q5T280 376 aaKnown RBP22.01■■□□□ 1.11
TSPAN3-210ENST00000561277 NOTUMQ6P988 496 aa22.01■■□□□ 1.11
TSPAN3-210ENST00000561277 ZNF598Q86UK7 904 aaKnown RBP22.01■■□□□ 1.11
TSPAN3-210ENST00000561277 PPM1EQ8WY54 764 aa22.01■■□□□ 1.11
TSPAN3-210ENST00000561277 CLP1Q92989 425 aaKnown RBP22.01■■□□□ 1.11
TSPAN3-210ENST00000561277 BLOC1S4Q9NUP1 217 aa22.01■■□□□ 1.11
TSPAN3-210ENST00000561277 HCSTQ9UBK5 93 aa22.01■■□□□ 1.11
TSPAN3-210ENST00000561277 PCDHB2Q9Y5E7 798 aa22.01■■□□□ 1.11
TSPAN3-210ENST00000561277 MORC2Q9Y6X9 1032 aaPredicted RBP22.01■■□□□ 1.11
TSPAN3-210ENST00000561277 NPHP3-ACAD11A0A0J9YXS1 232 aa22■■□□□ 1.11
TSPAN3-210ENST00000561277 LPXNO60711 386 aa22■■□□□ 1.11
TSPAN3-210ENST00000561277 YEATS4O95619 227 aa22■■□□□ 1.11
TSPAN3-210ENST00000561277 EOMESO95936 686 aa22■■□□□ 1.11
TSPAN3-210ENST00000561277 SKIP12755 728 aa22■■□□□ 1.11
TSPAN3-210ENST00000561277 GUCY2CP25092 1073 aa22■■□□□ 1.11
TSPAN3-210ENST00000561277 AXLP30530 894 aa22■■□□□ 1.11
TSPAN3-210ENST00000561277 RAB27AP51159 221 aa22■■□□□ 1.11
TSPAN3-210ENST00000561277 MAPK7Q13164 816 aa22■■□□□ 1.11
TSPAN3-210ENST00000561277 MCM6Q14566 821 aa22■■□□□ 1.11
TSPAN3-210ENST00000561277 CLLU1OSQ5K130 101 aa22■■□□□ 1.11
TSPAN3-210ENST00000561277 UBXN11Q5T124 520 aa22■■□□□ 1.11
TSPAN3-210ENST00000561277 HELQQ8TDG4 1101 aa22■■□□□ 1.11
TSPAN3-210ENST00000561277 RAD54LQ92698 747 aa22■■□□□ 1.11
TSPAN3-210ENST00000561277 TMEM117Q9H0C3 514 aa22■■□□□ 1.11
TSPAN3-210ENST00000561277 PRMT7Q9NVM4 692 aaPredicted RBP22■■□□□ 1.11
TSPAN3-210ENST00000561277 CCDC39Q9UFE4 941 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms