RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 NT5C3AQ9H0P0 336 aa16.93■□□□□ 0.3
SNRPA1-213ENST00000560856 BLOC1S4Q9NUP1 217 aa16.93■□□□□ 0.3
SNRPA1-213ENST00000560856 PRRC2BQ5JSZ5 2229 aaKnown RBP16.93■□□□□ 0.3
SNRPA1-213ENST00000560856 TSPAN1O60635 241 aa16.92■□□□□ 0.3
SNRPA1-213ENST00000560856 ZNF623O75123 536 aa16.92■□□□□ 0.3
SNRPA1-213ENST00000560856 POU3F3P20264 500 aaPredicted RBP16.92■□□□□ 0.3
SNRPA1-213ENST00000560856 KARSQ15046 597 aaKnown RBP16.92■□□□□ 0.3
SNRPA1-213ENST00000560856 SPECC1Q5M775 1068 aa16.92■□□□□ 0.3
SNRPA1-213ENST00000560856 UBXN11Q5T124 520 aa16.92■□□□□ 0.3
SNRPA1-213ENST00000560856 FIBCD1Q8N539 461 aa16.92■□□□□ 0.3
SNRPA1-213ENST00000560856 DACT1Q9NYF0 836 aa16.92■□□□□ 0.3
SNRPA1-213ENST00000560856 LRFN2Q9ULH4 789 aa16.92■□□□□ 0.3
SNRPA1-213ENST00000560856 PIN4Q9Y237 131 aaKnown RBP16.92■□□□□ 0.3
SNRPA1-213ENST00000560856 BRD1O95696 1058 aa16.91■□□□□ 0.3
SNRPA1-213ENST00000560856 PLA2G4BP0C869 781 aa16.91■□□□□ 0.3
SNRPA1-213ENST00000560856 FGFR1P11362 822 aa16.91■□□□□ 0.3
SNRPA1-213ENST00000560856 FOSL2P15408 326 aa16.91■□□□□ 0.3
SNRPA1-213ENST00000560856 IBSPP21815 317 aaPredicted RBP16.91■□□□□ 0.3
SNRPA1-213ENST00000560856 BTG3Q14201 252 aaPredicted RBP16.91■□□□□ 0.3
SNRPA1-213ENST00000560856 PCBP1Q15365 356 aaKnown RBP eCLIP16.91■□□□□ 0.3
SNRPA1-213ENST00000560856 EPC2Q52LR7 807 aa16.91■□□□□ 0.3
SNRPA1-213ENST00000560856 ARSHQ5FYA8 562 aa16.91■□□□□ 0.3
SNRPA1-213ENST00000560856 TMEM192Q8IY95 271 aa16.91■□□□□ 0.3
SNRPA1-213ENST00000560856 KIFAP3Q92845 792 aa16.91■□□□□ 0.3
SNRPA1-213ENST00000560856 ZNF396Q96N95 335 aaPredicted RBP16.91■□□□□ 0.3
SNRPA1-213ENST00000560856 CASD1Q96PB1 797 aa16.91■□□□□ 0.3
SNRPA1-213ENST00000560856 FZD8Q9H461 694 aa16.91■□□□□ 0.3
SNRPA1-213ENST00000560856 RNF216Q9NWF9 866 aaPredicted RBP16.91■□□□□ 0.3
SNRPA1-213ENST00000560856 MTUS1Q9ULD2 1270 aa16.91■□□□□ 0.3
SNRPA1-213ENST00000560856 MRPL42Q9Y6G3 142 aaKnown RBP16.91■□□□□ 0.3
SNRPA1-213ENST00000560856 FNDC1Q4ZHG4 1894 aaPredicted RBP16.9■□□□□ 0.3
SNRPA1-213ENST00000560856 LRRIQ4A6NIV6 560 aa16.9■□□□□ 0.3
SNRPA1-213ENST00000560856 INO80B-WBP1J3KQ70 363 aa16.9■□□□□ 0.3
SNRPA1-213ENST00000560856 HIP1RO75146 1068 aa16.9■□□□□ 0.3
SNRPA1-213ENST00000560856 YEATS4O95619 227 aa16.9■□□□□ 0.3
SNRPA1-213ENST00000560856 EOMESO95936 686 aa16.9■□□□□ 0.3
SNRPA1-213ENST00000560856 PLCG1P19174 1290 aa16.9■□□□□ 0.3
SNRPA1-213ENST00000560856 GUCY2CP25092 1073 aa16.9■□□□□ 0.3
SNRPA1-213ENST00000560856 BMPR1AP36894 532 aa16.9■□□□□ 0.3
SNRPA1-213ENST00000560856 NAMPTP43490 491 aa16.9■□□□□ 0.3
SNRPA1-213ENST00000560856 FAM187BQ17R55 369 aa16.9■□□□□ 0.3
SNRPA1-213ENST00000560856 PAN2Q504Q3 1202 aaKnown RBP16.9■□□□□ 0.3
SNRPA1-213ENST00000560856 CLLU1OSQ5K130 101 aa16.9■□□□□ 0.3
SNRPA1-213ENST00000560856 TWF2Q6IBS0 349 aaKnown RBP16.9■□□□□ 0.3
SNRPA1-213ENST00000560856 PPP4R3CPQ6ZMV5 832 aa16.9■□□□□ 0.3
SNRPA1-213ENST00000560856 MRPL10Q7Z7H8 261 aaKnown RBP16.9■□□□□ 0.3
SNRPA1-213ENST00000560856 KRI1Q8N9T8 703 aaKnown RBP16.9■□□□□ 0.3
SNRPA1-213ENST00000560856 SYMPKQ92797 1274 aaKnown RBP16.9■□□□□ 0.3
SNRPA1-213ENST00000560856 CALML4Q96GE6 196 aa16.9■□□□□ 0.3
SNRPA1-213ENST00000560856 CDK5RAP3Q96JB5 506 aa16.9■□□□□ 0.3
SNRPA1-213ENST00000560856 SAMD11Q96NU1 681 aa16.9■□□□□ 0.3
SNRPA1-213ENST00000560856 GAS2L1Q99501 681 aaPredicted RBP16.9■□□□□ 0.3
SNRPA1-213ENST00000560856 CCDC113Q9H0I3 377 aa16.9■□□□□ 0.3
SNRPA1-213ENST00000560856 FAM105AQ9NUU6 356 aa16.9■□□□□ 0.3
SNRPA1-213ENST00000560856 MYH15Q9Y2K3 1946 aa16.9■□□□□ 0.3
SNRPA1-213ENST00000560856 EYSQ5T1H1 3165 aa16.89■□□□□ 0.3
SNRPA1-213ENST00000560856 MYO7AQ13402 2215 aa16.89■□□□□ 0.29
SNRPA1-213ENST00000560856 PRUNE2Q8WUY3 3088 aa16.89■□□□□ 0.29
SNRPA1-213ENST00000560856 TTLL13PA6NNM8 815 aa16.89■□□□□ 0.29
SNRPA1-213ENST00000560856 MEIS3P2A8K0S8 358 aa16.89■□□□□ 0.29
SNRPA1-213ENST00000560856 C5orf67F2Z3F1 127 aa16.89■□□□□ 0.29
SNRPA1-213ENST00000560856 SPTLC2O15270 562 aa16.89■□□□□ 0.29
SNRPA1-213ENST00000560856 B4GALT5O43286 388 aa16.89■□□□□ 0.29
SNRPA1-213ENST00000560856 PPP6R2O75170 966 aa16.89■□□□□ 0.29
SNRPA1-213ENST00000560856 EDN1P05305 212 aa16.89■□□□□ 0.29
SNRPA1-213ENST00000560856 ARF4P18085 180 aaPredicted RBP16.89■□□□□ 0.29
SNRPA1-213ENST00000560856 AXLP30530 894 aa16.89■□□□□ 0.29
SNRPA1-213ENST00000560856 STK38Q15208 465 aa16.89■□□□□ 0.29
SNRPA1-213ENST00000560856 NAALADL2Q58DX5 795 aa16.89■□□□□ 0.29
SNRPA1-213ENST00000560856 LRRC55Q6ZSA7 311 aa16.89■□□□□ 0.29
SNRPA1-213ENST00000560856 FBXO22Q8NEZ5 403 aa16.89■□□□□ 0.29
SNRPA1-213ENST00000560856 GDPD5Q8WTR4 605 aa16.89■□□□□ 0.29
SNRPA1-213ENST00000560856 RAD54LQ92698 747 aa16.89■□□□□ 0.29
SNRPA1-213ENST00000560856 TMEM117Q9H0C3 514 aa16.89■□□□□ 0.29
SNRPA1-213ENST00000560856 HCSTQ9UBK5 93 aa16.89■□□□□ 0.29
SNRPA1-213ENST00000560856 PCDHB2Q9Y5E7 798 aa16.89■□□□□ 0.29
SNRPA1-213ENST00000560856 MTCH2Q9Y6C9 303 aa16.89■□□□□ 0.29
SNRPA1-213ENST00000560856 NPHP3-ACAD11A0A0J9YXS1 232 aa16.88■□□□□ 0.29
SNRPA1-213ENST00000560856 TBKBP1A7MCY6 615 aa16.88■□□□□ 0.29
SNRPA1-213ENST00000560856 H3BNC9 293 aa16.88■□□□□ 0.29
SNRPA1-213ENST00000560856 ERLIN2O94905 339 aa16.88■□□□□ 0.29
SNRPA1-213ENST00000560856 SSBP05455 408 aaKnown RBP eCLIP16.88■□□□□ 0.29
SNRPA1-213ENST00000560856 NPTX2P47972 431 aa16.88■□□□□ 0.29
SNRPA1-213ENST00000560856 RAB27AP51159 221 aa16.88■□□□□ 0.29
SNRPA1-213ENST00000560856 MCM6Q14566 821 aa16.88■□□□□ 0.29
SNRPA1-213ENST00000560856 PPP2R5AQ15172 486 aa16.88■□□□□ 0.29
SNRPA1-213ENST00000560856 FOXD4L6Q3SYB3 417 aaPredicted RBP16.88■□□□□ 0.29
SNRPA1-213ENST00000560856 AXDND1Q5T1B0 1012 aaPredicted RBP16.88■□□□□ 0.29
SNRPA1-213ENST00000560856 ATL3Q6DD88 541 aa16.88■□□□□ 0.29
SNRPA1-213ENST00000560856 FOXD4L3Q6VB84 417 aaPredicted RBP16.88■□□□□ 0.29
SNRPA1-213ENST00000560856 AGMOQ6ZNB7 445 aa16.88■□□□□ 0.29
SNRPA1-213ENST00000560856 SMG8Q8ND04 991 aaKnown RBP16.88■□□□□ 0.29
SNRPA1-213ENST00000560856 MAFAQ8NHW3 353 aaPredicted RBP16.88■□□□□ 0.29
SNRPA1-213ENST00000560856 LPPQ93052 612 aa16.88■□□□□ 0.29
SNRPA1-213ENST00000560856 CPB2Q96IY4 423 aa16.88■□□□□ 0.29
SNRPA1-213ENST00000560856 KIFC3Q9BVG8 833 aa16.88■□□□□ 0.29
SNRPA1-213ENST00000560856 TIPINQ9BVW5 301 aa16.88■□□□□ 0.29
SNRPA1-213ENST00000560856 EIF2AQ9BY44 585 aaKnown RBP16.88■□□□□ 0.29
SNRPA1-213ENST00000560856 C2orf40Q9H1Z8 148 aa16.88■□□□□ 0.29
SNRPA1-213ENST00000560856 CWH43Q9H720 699 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 660.4 ms